Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold159G37693 Striga asiatica HOM05D010075 ORTHO05D026014 6.6e-125 450.7 222 100.0
Zm00001eb160000 Zea mays HOM05D010075 ORTHO05D026014 2.2e-27 126.7 147 49.7
Zm00001eb324190 Zea mays HOM05D010075 ORTHO05D017268 2.4e-26 123.2 182 42.9
Os01g0567533 Oryza sativa ssp. japonica HOM05D010075 ORTHO05D026014 3.0e-24 116.3 203 38.9
SGA_v2.0_scaffold286G47099 Striga asiatica HOM05D010075 ORTHO05D026014 7.8e-17 91.7 126 43.7
Os06g0141133 Oryza sativa ssp. japonica HOM05D010075 ORTHO05D017268 1.7e-16 90.5 186 38.2
Zm00001eb423900 Zea mays HOM05D010075 ORTHO05D016365 2.3e-16 90.1 185 37.3
Zm00001eb008820 Zea mays HOM05D010075 ORTHO05D016365 8.7e-16 88.2 156 39.1
SGA_v2.0_scaffold306G48016 Striga asiatica HOM05D010075 ORTHO05D017268 1.6e-14 84.0 228 32.5
SGA_v2.0_scaffold60G20801 Striga asiatica HOM05D009630 ORTHO05D016321 4.5e-12 75.9 130 43.1
Os04g0453233 Oryza sativa ssp. japonica HOM05D010075 ORTHO05D016365 4.9e-11 72.4 171 34.5
Os04g0453450 Oryza sativa ssp. japonica HOM05D010075 ORTHO05D016365 6.4e-11 72.0 184 34.8
Os03g0101400 Oryza sativa ssp. japonica HOM05D010075 ORTHO05D016365 1.4e-10 70.9 153 35.9
Zm00001eb043160 Zea mays HOM05D010075 ORTHO05D016365 5.1e-08 62.4 71 43.7
SGA_v2.0_scaffold121G33080 Striga asiatica HOM05D010075 ORTHO05D026014 8.7e-08 61.6 109 32.1
Os04g0454250 Oryza sativa ssp. japonica HOM05D010075 ORTHO05D016365 3.6e-06 56.2 121 34.7


User provided reference genes

Program Settings