Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold159G37668 Striga asiatica HOM05D004656 ORTHO05D005404 6.7e-145 517.3 259 100.0
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 1.4e-52 210.7 336 46.1
Migut.E00415 Erythranthe guttata HOM05D004656 ORTHO05D005404 3.9e-36 156.0 350 38.9
Oeu053939.3 Olea europaea HOM05D004656 ORTHO05D005404 6.7e-36 155.2 304 39.5
SalBow7G0840 Salvia bowleyana HOM05D004656 ORTHO05D005404 1.6e-32 144.1 335 36.1
SalBow7G0885 Salvia bowleyana HOM05D004656 ORTHO05D005404 4.5e-32 142.5 335 35.8
vmacro03819 Vaccinium macrocarpon HOM05D004656 ORTHO05D005404 9.4e-30 134.8 339 31.9
Dinv39815 Davidia involucrata HOM05D004656 ORTHO05D005404 6.8e-28 128.6 335 33.1
Medtr4g090990 Medicago truncatula HOM05D004656 ORTHO05D005404 1.1e-25 121.3 153 45.8
Ca_18486_v3 Cicer arietinum L. HOM05D004656 ORTHO05D005404 3.1e-25 119.8 153 45.8
Lj4g0008048 Lotus japonicus HOM05D004656 ORTHO05D005404 3.1e-25 119.8 153 44.4
TPR.G32417 Trifolium pratense HOM05D004656 ORTHO05D005404 3.1e-25 119.8 153 45.8
CSS0039613 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 4.1e-25 119.4 295 32.9
Glyma.07G190600 Glycine max HOM05D004656 ORTHO05D005404 4.1e-25 119.4 153 43.8
Psat7g109640 Pisum sativum HOM05D004656 ORTHO05D005404 5.3e-25 119.0 153 45.1
Phvul.002G222500 Phaseolus vulgaris HOM05D004656 ORTHO05D005404 7.0e-25 118.6 153 43.8
arahy.Tifrunner.gnm1.ann1.9GFP5H Arachis hypogaea HOM05D004656 ORTHO05D005404 1.2e-24 117.9 153 44.4
VMungo0251G3002 Vigna mungo HOM05D004656 ORTHO05D005404 1.6e-24 117.5 153 43.8
Peaxi162Scf00588g01013 Petunia axillaris HOM05D004656 ORTHO05D005404 2.7e-24 116.7 331 32.6
arahy.Tifrunner.gnm1.ann1.N579TE Arachis hypogaea HOM05D004656 ORTHO05D005404 4.5e-24 115.9 153 43.1
CiPaw.09G158300 Carya illinoinensis HOM05D004656 ORTHO05D005404 4.5e-24 115.9 153 46.4
DCAR_004136 Daucus carota HOM05D004656 ORTHO05D005404 4.5e-24 115.9 336 31.2
Thecc.06G198700 Theobroma cacao HOM05D004656 ORTHO05D005404 4.5e-24 115.9 333 29.4
Solyc02g079050.3 Solanum lycopersicum HOM05D004656 ORTHO05D005404 5.9e-24 115.5 346 32.7
Duzib160G0757 Durio zibethinus HOM05D004656 ORTHO05D005404 7.7e-24 115.2 144 45.8
GSVIVG01003206001 Vitis vinifera HOM05D004656 ORTHO05D005404 1.0e-23 114.8 336 30.4
Cpa.g.sc27.117 Carica papaya HOM05D004656 ORTHO05D005404 1.3e-23 114.4 153 44.4
FAN11G0019 Fragaria x ananassa HOM05D004656 ORTHO05D005404 1.3e-23 114.4 336 30.1
COL.COLO4_31575 Corchorus olitorius HOM05D004656 ORTHO05D005404 1.7e-23 114.0 150 44.0
Haze_06568 Corylus avellana HOM05D004656 ORTHO05D005404 1.7e-23 114.0 336 29.2
Lalb_Chr05g0218181 Lupinus albus HOM05D004656 ORTHO05D005404 1.7e-23 114.0 153 43.8
Nitab4.5_0003574g0090 Nicotiana tabacum HOM05D004656 ORTHO05D005404 1.7e-23 114.0 346 32.7
GSVIVG01003202001 Vitis vinifera HOM05D004656 ORTHO05D005404 1.7e-23 114.0 336 30.4
Nitab4.5_0000190g0180 Nicotiana tabacum HOM05D004656 ORTHO05D005404 2.2e-23 113.6 346 32.1
FvH4_3g04050 Fragaria vesca HOM05D004656 ORTHO05D005404 2.9e-23 113.2 337 29.4
Potri.004G034900 Populus trichocarpa HOM05D004656 ORTHO05D005404 2.9e-23 113.2 149 47.0
Prupe.4G036500 Prunus persica HOM05D004656 ORTHO05D005404 2.9e-23 113.2 336 30.1
QL03p053091 Quercus lobata HOM05D004656 ORTHO05D005404 2.9e-23 113.2 329 31.0
QL05p081970 Quercus lobata HOM05D004656 ORTHO05D005404 2.9e-23 113.2 329 31.0
Sopen02g023860 Solanum pennellii HOM05D004656 ORTHO05D005404 2.9e-23 113.2 346 32.1
RcHm_v2.0_Chr5g0006531 Rosa chinensis HOM05D004656 ORTHO05D005404 3.8e-23 112.8 336 31.0
Eucgr.C00026 Eucalyptus grandis HOM05D004656 ORTHO05D005404 5.0e-23 112.5 152 43.4
FAN16G1451 Fragaria x ananassa HOM05D004656 ORTHO05D005404 5.0e-23 112.5 336 30.7
FAN25G3623 Fragaria x ananassa HOM05D004656 ORTHO05D005404 5.0e-23 112.5 336 30.4
Gorai.011G022700 Gossypium raimondii HOM05D004656 ORTHO05D005404 5.0e-23 112.5 333 29.4
MD10G1303000 Malus domestica HOM05D004656 ORTHO05D005404 6.5e-23 112.1 336 29.5
Sabra04G0020600 Salix brachista HOM05D004656 ORTHO05D005404 6.5e-23 112.1 149 46.3
Gohir.A10G020800 Gossypium hirsutum HOM05D004656 ORTHO05D005404 8.5e-23 111.7 333 29.4
Cfa000358 Carpinus fangiana HOM05D004656 ORTHO05D005404 1.1e-22 111.3 294 29.9
unitig_8.g3352 Utricularia gibba HOM05D004656 ORTHO05D005404 1.1e-22 111.3 151 49.7
PGR042G3654 Punica granatum HOM05D004656 ORTHO05D005404 2.5e-22 110.2 311 30.5
Atru.chr10.2003 Acer truncatum HOM05D004656 ORTHO05D005404 7.2e-22 108.6 335 30.1
CAN.G1181.24 Capsicum annuum HOM05D004656 ORTHO05D005404 1.2e-21 107.8 346 31.2
MELO3C025319.2 Cucumis melo HOM05D004656 ORTHO05D005404 2.1e-21 107.1 151 43.0
CsaV3_1G030810 Cucumis sativus L. HOM05D004656 ORTHO05D005404 2.1e-21 107.1 151 43.0
TWI38G2153 Tripterygium wilfordii HOM05D004656 ORTHO05D005404 2.7e-21 106.7 148 44.6
Cc02_g12490 Coffea canephora HOM05D004656 ORTHO05D005404 3.6e-21 106.3 152 46.1
AL7G32520 Arabidopsis lyrata HOM05D004656 ORTHO05D005404 4.7e-21 105.9 323 28.8
Nn2g12691 Nelumbo nucifera HOM05D004656 ORTHO05D005404 8.0e-21 105.1 335 29.6
Sed0019970 Sechium edule HOM05D004656 ORTHO05D005404 1.0e-20 104.8 152 42.1
Gohir.D10G021600 Gossypium hirsutum HOM05D004656 ORTHO05D005404 1.8e-20 104.0 343 28.9
Lsat_1_v5_gn_4_57080 Lactuca sativa HOM05D004656 ORTHO05D005404 1.8e-20 104.0 326 30.4
Lj2A281G21 Lonicera japonica HOM05D004656 ORTHO05D005404 1.8e-20 104.0 176 39.2
CANSAT56G3558 Cannabis sativa HOM05D004656 ORTHO05D005404 2.3e-20 103.6 152 42.1
HanXRQChr17g0551051 Helianthus annuus HOM05D004656 ORTHO05D005404 2.3e-20 103.6 147 46.3
Manes.15G100000 Manihot esculenta HOM05D004656 ORTHO05D005404 2.3e-20 103.6 112 49.1
A01p12840 Brassica napus HOM05D004656 ORTHO05D005404 3.0e-20 103.2 153 41.2
C01p15460 Brassica napus HOM05D004656 ORTHO05D005404 3.0e-20 103.2 153 41.2
BolC1t01500H Brassica oleracea HOM05D004656 ORTHO05D005404 3.0e-20 103.2 153 41.2
BraA01t01228Z Brassica rapa HOM05D004656 ORTHO05D005404 3.0e-20 103.2 153 41.2
Aa31LG6G3550 Aethionema arabicum HOM05D004656 ORTHO05D005404 4.0e-20 102.8 336 28.0
ECA234G0402 Erigeron canadensis HOM05D004656 ORTHO05D005404 4.0e-20 102.8 154 44.2
Ciclev10014364m.g Citrus clementina HOM05D004656 ORTHO05D005404 5.2e-20 102.4 152 43.4
PSO063G3544 Papaver somniferum HOM05D004656 ORTHO05D005404 5.2e-20 102.4 131 45.8
BcaNung02789 Brassica carinata HOM05D004656 ORTHO05D005404 6.8e-20 102.1 129 45.0
PSO782G2217 Papaver somniferum HOM05D004656 ORTHO05D005404 6.8e-20 102.1 131 45.0
ClCG01G022700 Citrullus lanatus HOM05D004656 ORTHO05D005404 8.8e-20 101.7 151 41.7
Sp7g19640 Schrenkiella parvula HOM05D004656 ORTHO05D005404 8.8e-20 101.7 153 41.2
AL7G32500 Arabidopsis lyrata HOM05D004656 ORTHO05D005404 2.0e-19 100.5 146 43.8
EL10Ac8g20612 Beta vulgaris HOM05D004656 ORTHO05D005404 4.4e-19 99.4 115 48.7
MBI16_g41806_MAGBIO Magnolia biondii HOM05D004656 ORTHO05D005404 4.4e-19 99.4 152 45.4
Aqoxy7G03085 Aquilegia oxysepala HOM05D004656 ORTHO05D005404 5.7e-19 99.0 132 43.2
AT4G21530 Arabidopsis thaliana HOM05D004656 ORTHO05D005404 7.5e-19 98.6 329 28.3
BcaNung02790 Brassica carinata HOM05D004656 ORTHO05D005404 1.3e-18 97.8 115 47.0
Thhalv10024471m.g Eutrema salsugineum HOM05D004656 ORTHO05D005404 1.7e-18 97.4 145 42.1
AUR62014723 Chenopodium quinoa HOM05D004656 ORTHO05D005404 6.3e-18 95.5 115 50.4
CARHR228190 Cardamine hirsuta HOM05D004656 ORTHO05D005404 1.1e-17 94.7 146 41.8
Carub.0007s1989 Capsella rubella HOM05D004656 ORTHO05D005404 1.8e-17 94.0 146 41.1
THA.LOC104812734 Tarenaya hassleriana HOM05D004656 ORTHO05D005404 1.8e-17 94.0 331 27.8
Sc17g0006590 Simmondsia chinensis HOM05D004656 ORTHO05D005404 2.4e-17 93.6 132 43.2
AUR62016904 Chenopodium quinoa HOM05D004656 ORTHO05D005404 4.1e-17 92.8 115 47.0
Eucgr.D02667 Eucalyptus grandis HOM05D004656 ORTHO05D005404 7.7e-16 88.6 142 39.4
Eucgr.E03497 Eucalyptus grandis HOM05D004656 ORTHO05D005404 2.9e-15 86.7 93 51.6
TAR626G0166 Trochodendron aralioides HOM05D004656 ORTHO05D005404 1.2e-13 81.3 266 28.6
BcaC09g51339 Brassica carinata HOM05D004656 ORTHO05D005404 2.8e-13 80.1 73 57.5
HPP92_015366 Vanilla planifolia HOM05D004656 ORTHO05D005404 3.6e-13 79.7 116 41.4
ATR0580G317 Amborella trichopoda HOM05D004656 ORTHO05D005404 4.7e-13 79.3 133 41.4
Zm00001eb192820 Zea mays HOM05D004656 ORTHO05D005404 5.2e-12 75.9 151 35.8
Hund23621 Selenicereus undatus HOM05D004656 ORTHO05D005404 1.5e-11 74.3 63 60.3
EL10Ac3g05965 Beta vulgaris HOM05D004656 ORTHO05D005404 2.0e-11 73.9 60 63.3
CDE02G2476 Ceratophyllum demersum HOM05D004656 ORTHO05D005404 2.6e-11 73.6 98 44.9
EL10Ac9g22460 Beta vulgaris HOM05D004656 ORTHO05D005404 1.7e-10 70.9 121 38.8
EL10Ac6g14063 Beta vulgaris HOM05D004656 ORTHO05D005404 4.9e-10 69.3 62 56.5
Mapoly0038s0098 Marchantia polymorpha HOM05D004656 ORTHO05D005404 1.4e-09 67.8 139 36.0
SEGI_33901 Sequoiadendron giganteum HOM05D004656 ORTHO05D005404 3.2e-09 66.6 105 39.0
Pp3c19_17530 Physcomitrium patens HOM05D004656 ORTHO05D005404 1.7e-07 60.8 109 35.8
Eucgr.C00045 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.1e-06 58.2 85 42.4


User provided reference genes

Program Settings