Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold159G37666 Striga asiatica HOM05D006902 ORTHO05D008468 7.1e-75 284.3 191 100.0
Migut.H01513 Erythranthe guttata HOM05D006902 ORTHO05D008468 8.5e-36 154.5 184 63.6
MSTRG.14679 Avicennia marina HOM05D006902 ORTHO05D008468 5.3e-30 135.2 202 55.0
SalBow7G0974 Salvia bowleyana HOM05D006902 ORTHO05D008468 5.9e-29 131.7 175 62.3
Dinv40499 Davidia involucrata HOM05D006902 ORTHO05D008468 1.8e-25 120.2 175 50.3
Sed0006938 Sechium edule HOM05D006902 ORTHO05D008468 9.7e-24 114.4 182 50.0
Hma1.2p1_0144F.1_g064740 Hydrangea macrophylla HOM05D006902 ORTHO05D008468 1.3e-23 114.0 184 50.0
PGSC0003DMG402010824 Solanum tuberosum HOM05D006902 ORTHO05D008468 1.7e-23 113.6 179 46.9
Sopen10g004990 Solanum pennellii HOM05D006902 ORTHO05D008468 4.8e-23 112.1 179 45.8
CsaV3_4G028920 Cucumis sativus L. HOM05D006902 ORTHO05D008468 1.8e-22 110.2 172 48.8
Actinidia24062 Actinidia chinensis HOM05D006902 ORTHO05D008468 2.4e-22 109.8 188 48.9
Duzib235G0611 Durio zibethinus HOM05D000306 ORTHO05D000410 1.0e-20 104.4 126 60.3
Oeu038228.1 Olea europaea HOM05D006902 ORTHO05D008468 1.7e-20 103.6 203 39.9
Thecc.06G198400 Theobroma cacao HOM05D006902 ORTHO05D008468 2.9e-20 102.8 167 54.5
DCAR_008067 Daucus carota HOM05D006902 ORTHO05D008468 8.5e-20 101.3 182 47.8
Gohir.A05G165200 Gossypium hirsutum HOM05D006902 ORTHO05D008468 1.5e-19 100.5 168 48.8
Manes.16G021000 Manihot esculenta HOM05D006902 ORTHO05D008468 1.9e-19 100.1 171 52.6
PSO782G4966 Papaver somniferum HOM05D006902 ORTHO05D008468 1.9e-19 100.1 184 47.8
Rhsim02G0120100 Rhododendron simsii HOM05D006902 ORTHO05D008468 4.2e-19 99.0 183 42.1
arahy.Tifrunner.gnm1.ann1.G41NRI Arachis hypogaea HOM05D006902 ORTHO05D008468 7.2e-19 98.2 164 55.5
arahy.Tifrunner.gnm1.ann1.EL94R1 Arachis hypogaea HOM05D006902 ORTHO05D008468 9.4e-19 97.8 164 56.7
PSO063G2673 Papaver somniferum HOM05D006902 ORTHO05D008468 9.4e-19 97.8 184 46.7
Potri.004G035200 Populus trichocarpa HOM05D006902 ORTHO05D008468 1.2e-18 97.4 176 40.9
Ciclev10016776m.g Citrus clementina HOM05D006902 ORTHO05D008468 1.6e-18 97.1 183 52.5
Lsat_1_v5_gn_4_57121 Lactuca sativa HOM05D006902 ORTHO05D008468 2.1e-18 96.7 191 46.1
TWI38G1087 Tripterygium wilfordii HOM05D006902 ORTHO05D008468 3.6e-18 95.9 176 52.8
Gohir.D05G168200 Gossypium hirsutum HOM05D006902 ORTHO05D008468 4.7e-18 95.5 167 50.3
Gorai.009G173300 Gossypium raimondii HOM05D006902 ORTHO05D008468 1.4e-17 94.0 168 50.0
Potri.011G043400 Populus trichocarpa HOM05D006902 ORTHO05D008468 1.8e-17 93.6 179 39.7
ClCG04G003630 Citrullus lanatus HOM05D006902 ORTHO05D008468 5.2e-17 92.0 189 43.9
QL03p053069 Quercus lobata HOM05D006902 ORTHO05D008468 6.7e-17 91.7 170 52.4
Sabra11G0030000 Salix brachista HOM05D006902 ORTHO05D008468 6.7e-17 91.7 170 40.6
Nn8g40519 Nelumbo nucifera HOM05D006902 ORTHO05D008468 1.2e-16 90.9 184 38.6
CANSAT56G2140 Cannabis sativa HOM05D006902 ORTHO05D008468 1.5e-16 90.5 163 42.9
Prupe.4G036300 Prunus persica HOM05D006902 ORTHO05D008468 2.0e-16 90.1 166 48.8
vmacro15868 Vaccinium macrocarpon HOM05D006902 ORTHO05D008468 2.6e-16 89.7 117 52.1
Atru.chr10.2001 Acer truncatum HOM05D006902 ORTHO05D008468 3.3e-16 89.4 184 41.3
THA.LOC104809549 Tarenaya hassleriana HOM05D006902 ORTHO05D008468 1.3e-15 87.4 181 49.7
unitig_8.g3353 Utricularia gibba HOM05D006902 ORTHO05D008468 1.7e-15 87.0 170 52.4
RcHm_v2.0_Chr5g0006551 Rosa chinensis HOM05D006902 ORTHO05D008468 2.8e-15 86.3 170 43.5
ECA234G0685 Erigeron canadensis HOM05D006902 ORTHO05D008468 8.2e-15 84.7 130 52.3
Peaxi162Scf00371g01024 Petunia axillaris HOM05D006902 ORTHO05D008468 8.2e-15 84.7 176 41.5
FvH4_3g04070 Fragaria vesca HOM05D006902 ORTHO05D008468 1.1e-14 84.3 161 39.8
MD10G1302800 Malus domestica HOM05D006902 ORTHO05D008468 1.4e-14 84.0 169 36.7
AT1G11240 Arabidopsis thaliana HOM05D006902 ORTHO05D008468 3.1e-14 82.8 175 45.1
FvH4_1g04320 Fragaria vesca HOM05D006902 ORTHO05D008468 4.1e-14 82.4 170 44.1
Lj4g0003242 Lotus japonicus HOM05D006902 ORTHO05D008468 7.0e-14 81.6 169 47.3
Hund23624 Selenicereus undatus HOM05D006902 ORTHO05D008468 7.0e-14 81.6 120 57.5
HanXRQChr17g0551071 Helianthus annuus HOM05D006902 ORTHO05D008468 9.1e-14 81.3 166 48.2
Sc05g0008060 Simmondsia chinensis HOM05D006902 ORTHO05D008468 2.0e-13 80.1 186 45.7
Sc05g0010000 Simmondsia chinensis HOM05D006902 ORTHO05D008468 2.0e-13 80.1 186 45.7
Eucgr.D00710 Eucalyptus grandis HOM05D006902 ORTHO05D008468 5.9e-13 78.6 168 50.6
AUR62016906 Chenopodium quinoa HOM05D006902 ORTHO05D008468 7.7e-13 78.2 190 45.3
Medtr4g090910 Medicago truncatula HOM05D006902 ORTHO05D008468 7.7e-13 78.2 177 46.9
Sp1g09900 Schrenkiella parvula HOM05D006902 ORTHO05D008468 7.7e-13 78.2 169 46.7
FAN28G0433 Fragaria x ananassa HOM05D006902 ORTHO05D008468 1.0e-12 77.8 170 40.0
Eucgr.L03594 Eucalyptus grandis HOM05D006902 ORTHO05D008468 3.8e-12 75.9 166 50.0
ATR0580G203 Amborella trichopoda HOM05D006902 ORTHO05D008468 5.0e-12 75.5 126 38.9
VMungo0251G2276 Vigna mungo HOM05D006902 ORTHO05D008468 6.5e-12 75.1 159 49.7
AUR62014725 Chenopodium quinoa HOM05D006902 ORTHO05D008468 8.5e-12 74.7 171 46.2
Nitab4.5_0005936g0020 Nicotiana tabacum HOM05D006902 ORTHO05D008468 8.5e-12 74.7 182 47.3
Aqoxy7G03119 Aquilegia oxysepala HOM05D006902 ORTHO05D008468 1.1e-11 74.3 181 37.6
AL1G22260 Arabidopsis lyrata HOM05D006902 ORTHO05D008468 1.1e-11 74.3 170 44.7
Nitab4.5_0003223g0030 Nicotiana tabacum HOM05D006902 ORTHO05D008468 1.9e-11 73.6 178 47.8
C05p09500 Brassica napus HOM05D006902 ORTHO05D008468 2.5e-11 73.2 175 45.1
Phvul.002G222700 Phaseolus vulgaris HOM05D006902 ORTHO05D008468 2.5e-11 73.2 157 47.8
COL.COLO4_31574 Corchorus olitorius HOM05D000306 ORTHO05D000410 3.2e-11 72.8 54 75.9
Ca_18489_v3 Cicer arietinum L. HOM05D006902 ORTHO05D008468 5.5e-11 72.0 161 46.0
Ca_29542_v3 Cicer arietinum L. HOM05D006902 ORTHO05D008468 5.5e-11 72.0 161 46.0
Cc02_g12510 Coffea canephora HOM05D006902 ORTHO05D008468 5.5e-11 72.0 181 48.1
A06p07900 Brassica napus HOM05D006902 ORTHO05D008468 9.4e-11 71.2 179 44.7
BraA06t23989Z Brassica rapa HOM05D006902 ORTHO05D008468 9.4e-11 71.2 179 44.7
Ah.14g088940 Amaranthus hybridus HOM05D006902 ORTHO05D008468 1.2e-10 70.9 168 45.8
BolC5t29692H Brassica oleracea HOM05D006902 ORTHO05D008468 1.2e-10 70.9 175 44.6
FAN11G0740 Fragaria x ananassa HOM05D000306 ORTHO05D000410 1.6e-10 70.5 88 44.3
BcaNung04470 Brassica carinata HOM05D006902 ORTHO05D008468 2.1e-10 70.1 175 45.1
BcaC05g24999 Brassica carinata HOM05D006902 ORTHO05D008468 2.7e-10 69.7 110 58.2
Carub.0001s1082 Capsella rubella HOM05D006902 ORTHO05D008468 3.6e-10 69.3 182 40.7
CARHR011470 Cardamine hirsuta HOM05D006902 ORTHO05D008468 3.6e-10 69.3 179 45.8
Glyma.07G190800 Glycine max HOM05D006902 ORTHO05D008468 3.6e-10 69.3 157 48.4
Psat7g109600 Pisum sativum HOM05D006902 ORTHO05D008468 4.7e-10 68.9 166 46.4
PGR004G1238 Punica granatum HOM05D006902 ORTHO05D008468 6.1e-10 68.6 185 45.4
Ah.09g236070 Amaranthus hybridus HOM05D006902 ORTHO05D008468 8.0e-10 68.2 181 45.9
Cpa.g.c36644 Carica papaya HOM05D006902 ORTHO05D008468 8.0e-10 68.2 50 72.0
CiPaw.09G158500 Carya illinoinensis HOM05D006902 ORTHO05D008468 8.0e-10 68.2 167 44.3
TPR.G32415 Trifolium pratense HOM05D006902 ORTHO05D008468 8.0e-10 68.2 162 44.4
Lalb_Chr16g0383411 Lupinus albus HOM05D006902 ORTHO05D008468 1.8e-09 67.0 155 49.7
Sabra04G0021000 Salix brachista HOM05D006902 ORTHO05D008468 3.0e-09 66.2 182 34.1
Os03g0353500 Oryza sativa ssp. japonica HOM05D006902 ORTHO05D008468 4.0e-09 65.9 162 38.3
Glyma.08G058500 Glycine max HOM05D006902 ORTHO05D008468 1.5e-08 63.9 158 46.2
Aa31LG1G3550 Aethionema arabicum HOM05D006902 ORTHO05D008468 2.6e-08 63.2 175 43.4
EL10Ac8g20614 Beta vulgaris HOM05D006902 ORTHO05D008468 9.8e-08 61.2 162 47.5
SEGI_26187 Sequoiadendron giganteum HOM05D006902 ORTHO05D008468 9.8e-08 61.2 176 40.3
Thhalv10008794m.g Eutrema salsugineum HOM05D006902 ORTHO05D008468 1.7e-07 60.5 182 45.1
QL05p081948 Quercus lobata HOM05D006902 ORTHO05D008468 2.8e-07 59.7 170 44.1
Zm00001eb394590 Zea mays HOM05D006902 ORTHO05D008468 1.4e-06 57.4 114 42.1
MD05G1325000 Malus domestica HOM05D006902 ORTHO05D008468 3.1e-06 56.2 35 74.3


User provided reference genes

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