Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold159G37625 Striga asiatica HOM05D006426 ORTHO05D007737 2.3e-191 672.2 359 100.0
SGA_v2.0_scaffold49G18304 Striga asiatica HOM05D006426 ORTHO05D007737 1.4e-71 274.2 443 49.2
MSTRG.14180 Avicennia marina HOM05D006426 ORTHO05D007737 3.2e-60 236.5 467 39.6
Migut.H01020 Erythranthe guttata HOM05D006426 ORTHO05D007737 1.5e-49 201.1 475 39.6
PGSC0003DMG400018371 Solanum tuberosum HOM05D006426 ORTHO05D007737 1.8e-47 194.1 398 39.4
Nitab4.5_0001871g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 3.1e-47 193.4 467 38.3
Sopen07g028590 Solanum pennellii HOM05D006426 ORTHO05D007737 4.0e-47 193.0 464 37.1
Solyc07g054690.1 Solanum lycopersicum HOM05D006426 ORTHO05D007737 1.5e-46 191.0 400 39.5
CAN.G508.22 Capsicum annuum HOM05D006426 ORTHO05D007737 4.5e-46 189.5 447 37.8
Cc05_g06260 Coffea canephora HOM05D006426 ORTHO05D007737 4.5e-46 189.5 358 39.4
TWI36G1326 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 4.2e-44 183.0 338 40.8
Peaxi162Scf00007g00272 Petunia axillaris HOM05D006426 ORTHO05D007737 1.6e-43 181.0 413 39.2
Nitab4.5_0002370g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 4.6e-43 179.5 478 35.8
Potri.013G147500 Populus trichocarpa HOM05D006426 ORTHO05D007737 1.3e-42 177.9 388 37.6
SalBow1G4632 Salvia bowleyana HOM05D006426 ORTHO05D007737 2.5e-41 173.7 415 37.6
Ciclev10015289m.g Citrus clementina HOM05D006426 ORTHO05D007737 4.3e-41 172.9 324 40.7
TWI18G0136 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 9.6e-41 171.8 345 38.8
Actinidia09902 Actinidia chinensis HOM05D006426 ORTHO05D007737 1.6e-40 171.0 428 35.3
unitig_52.g17339 Utricularia gibba HOM05D006426 ORTHO05D007737 1.6e-40 171.0 384 37.0
TAR626G1919 Trochodendron aralioides HOM05D006426 ORTHO05D007737 2.1e-40 170.6 398 36.4
Actinidia12458 Actinidia chinensis HOM05D006426 ORTHO05D007737 3.7e-40 169.9 426 35.7
Thecc.02G171600 Theobroma cacao HOM05D006426 ORTHO05D007737 3.7e-40 169.9 343 38.2
Potri.019G116200 Populus trichocarpa HOM05D006426 ORTHO05D007737 8.2e-40 168.7 381 37.0
Dinv15495 Davidia involucrata HOM05D006426 ORTHO05D007737 1.4e-39 167.9 425 36.2
TWI75G1119 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 1.4e-39 167.9 338 38.8
Hma1.2p1_0565F.1_g179550 Hydrangea macrophylla HOM05D006426 ORTHO05D007737 1.8e-39 167.5 420 35.7
Duzib248G1395 Durio zibethinus HOM05D006426 ORTHO05D007737 3.1e-39 166.8 340 38.2
QL08p037311 Quercus lobata HOM05D006426 ORTHO05D007737 3.1e-39 166.8 350 39.1
Cfa014544 Carpinus fangiana HOM05D006426 ORTHO05D007737 1.2e-38 164.9 348 39.7
Oeu018075.1 Olea europaea HOM05D006426 ORTHO05D007737 1.5e-38 164.5 404 35.6
Haze_13087 Corylus avellana HOM05D006426 ORTHO05D007737 2.0e-38 164.1 351 39.9
Oeu025481.1 Olea europaea HOM05D006426 ORTHO05D007737 1.0e-37 161.8 419 35.1
Sabra19G0136500 Salix brachista HOM05D006426 ORTHO05D007737 1.3e-37 161.4 325 39.1
COL.COLO4_13683 Corchorus olitorius HOM05D006426 ORTHO05D007737 1.7e-37 161.0 341 37.0
HanXRQChr15g0488091 Helianthus annuus HOM05D006426 ORTHO05D007737 3.8e-37 159.8 365 35.3
Manes.13G151600 Manihot esculenta HOM05D006426 ORTHO05D007737 3.8e-37 159.8 440 33.6
Duzib132G0414 Durio zibethinus HOM05D006426 ORTHO05D007737 6.5e-37 159.1 345 38.0
Gorai.005G205500 Gossypium raimondii HOM05D006426 ORTHO05D007737 6.5e-37 159.1 340 35.9
Sabra13G0119100 Salix brachista HOM05D006426 ORTHO05D007737 6.5e-37 159.1 326 38.7
Sabra19G0117200 Salix brachista HOM05D006426 ORTHO05D007737 1.1e-36 158.3 325 38.5
PGR042G3565 Punica granatum HOM05D006426 ORTHO05D007737 1.4e-36 157.9 443 32.3
CiPaw.04G122700 Carya illinoinensis HOM05D006426 ORTHO05D007737 2.5e-36 157.1 445 34.2
Gohir.A03G160000 Gossypium hirsutum HOM05D006426 ORTHO05D007737 2.5e-36 157.1 340 36.5
Prupe.3G231100 Prunus persica HOM05D006426 ORTHO05D007737 3.2e-36 156.8 355 37.2
Rhsim06G0152100 Rhododendron simsii HOM05D006426 ORTHO05D007737 7.1e-36 155.6 473 34.7
Eucgr.A01776 Eucalyptus grandis HOM05D006426 ORTHO05D007737 9.3e-36 155.2 374 36.9
Cpa.g.sc34.90 Carica papaya HOM05D006426 ORTHO05D007737 1.2e-35 154.8 330 37.6
Gohir.D02G183100 Gossypium hirsutum HOM05D006426 ORTHO05D007737 1.6e-35 154.5 405 32.3
THA.LOC104804065 Tarenaya hassleriana HOM05D006426 ORTHO05D007737 2.7e-35 153.7 378 34.9
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 1.0e-34 151.8 352 37.2
MD17G1084500 Malus domestica HOM05D006426 ORTHO05D007737 1.3e-34 151.4 369 36.9
FAN02G4384 Fragaria x ananassa HOM05D006426 ORTHO05D007737 1.8e-34 151.0 430 33.7
DCAR_012977 Daucus carota HOM05D006426 ORTHO05D007737 3.9e-34 149.8 379 35.4
MD09G1096400 Malus domestica HOM05D006426 ORTHO05D007737 6.7e-34 149.1 456 34.2
Manes.12G083000 Manihot esculenta HOM05D006426 ORTHO05D007737 1.1e-33 148.3 433 31.9
RcHm_v2.0_Chr2g0161781 Rosa chinensis HOM05D006426 ORTHO05D007737 3.3e-33 146.7 433 32.1
DCAR_009725 Daucus carota HOM05D006426 ORTHO05D007737 5.7e-33 146.0 430 33.5
FvH4_6g44570 Fragaria vesca HOM05D006426 ORTHO05D007737 5.7e-33 146.0 436 32.6
FAN09G0359 Fragaria x ananassa HOM05D006426 ORTHO05D007737 9.7e-33 145.2 434 32.7
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 2.8e-32 143.7 347 36.6
FAN14G1414 Fragaria x ananassa HOM05D006426 ORTHO05D007737 2.8e-32 143.7 436 32.3
TAR627G1051 Trochodendron aralioides HOM05D006426 ORTHO05D007737 2.8e-32 143.7 335 37.0
AL7G24370 Arabidopsis lyrata HOM05D006426 ORTHO05D007737 6.3e-32 142.5 401 32.2
CARHR235940 Cardamine hirsuta HOM05D006426 ORTHO05D007737 6.3e-32 142.5 345 33.9
EL10Ac9g20938 Beta vulgaris HOM05D006426 ORTHO05D007737 6.9e-31 139.0 351 35.3
BraA01t01897Z Brassica rapa HOM05D006426 ORTHO05D007737 3.4e-30 136.7 368 35.6
ECA232G2383 Erigeron canadensis HOM05D006426 ORTHO05D007737 4.5e-30 136.3 362 35.6
A01p19640 Brassica napus HOM05D006426 ORTHO05D007737 7.7e-30 135.6 369 35.8
Thhalv10025277m.g Eutrema salsugineum HOM05D006426 ORTHO05D007737 7.7e-30 135.6 338 34.3
AT4G28230 Arabidopsis thaliana HOM05D006426 ORTHO05D007737 1.0e-29 135.2 379 33.5
Nn1g03877 Nelumbo nucifera HOM05D006426 ORTHO05D007737 2.2e-29 134.0 344 35.8
Aa31LG2G22090 Aethionema arabicum HOM05D006426 ORTHO05D007737 5.0e-29 132.9 307 36.8
arahy.Tifrunner.gnm1.ann1.2866YZ Arachis hypogaea HOM05D006426 ORTHO05D007737 5.0e-29 132.9 441 31.5
BcaNung01587 Brassica carinata HOM05D006426 ORTHO05D007737 6.5e-29 132.5 363 35.8
Carub.0007s1253 Capsella rubella HOM05D006426 ORTHO05D007737 6.5e-29 132.5 358 33.2
arahy.Tifrunner.gnm1.ann1.512YGT Arachis hypogaea HOM05D006426 ORTHO05D007737 8.5e-29 132.1 433 29.8
Lj8P117T60 Lonicera japonica HOM05D006426 ORTHO05D007737 1.9e-28 131.0 322 36.0
Lsat_1_v5_gn_4_69460 Lactuca sativa HOM05D006426 ORTHO05D007737 3.2e-28 130.2 303 37.0
Sp7g26190 Schrenkiella parvula HOM05D006426 ORTHO05D007737 3.2e-28 130.2 308 35.4
Aqoxy1G03895 Aquilegia oxysepala HOM05D006426 ORTHO05D007737 9.4e-28 128.6 474 29.5
Lj3g0000273 Lotus japonicus HOM05D006426 ORTHO05D007737 7.9e-27 125.6 387 34.1
C01p24670 Brassica napus HOM05D006426 ORTHO05D007737 4.3e-25 119.8 368 34.0
BolC1t02416H Brassica oleracea HOM05D006426 ORTHO05D007737 4.3e-25 119.8 368 34.0
Sed0007067 Sechium edule HOM05D006426 ORTHO05D007737 4.3e-25 119.8 330 35.8
Glyma.11G158800 Glycine max HOM05D006426 ORTHO05D007737 1.7e-24 117.9 284 37.0
ClCG02G017320 Citrullus lanatus HOM05D006426 ORTHO05D007737 2.8e-24 117.1 350 36.0
MBI18_g45419_MAGBIO Magnolia biondii HOM05D006426 ORTHO05D007737 4.8e-24 116.3 343 34.7
Glyma.04G132700 Glycine max HOM05D006426 ORTHO05D007737 1.1e-23 115.2 276 35.5
PSO210G4394 Papaver somniferum HOM05D006426 ORTHO05D007737 1.4e-23 114.8 308 35.1
Sc06g0009150 Simmondsia chinensis HOM05D006426 ORTHO05D007737 1.4e-23 114.8 348 32.5
PSO832G1174 Papaver somniferum HOM05D006426 ORTHO05D007737 1.8e-23 114.4 309 33.7
TAR629G2656 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.8e-23 114.4 313 34.8
BcaC09g50504 Brassica carinata HOM05D006426 ORTHO05D007737 2.4e-23 114.0 370 33.2
MELO3C013535.2 Cucumis melo HOM05D006426 ORTHO05D007737 6.9e-23 112.5 344 34.6
PSO541G1576 Papaver somniferum HOM05D006426 ORTHO05D007737 2.6e-22 110.5 469 31.6
VMungo1080G0900 Vigna mungo HOM05D006426 ORTHO05D007737 3.4e-22 110.2 298 34.2
PSO675G8522 Papaver somniferum HOM05D006426 ORTHO05D007737 5.9e-22 109.4 469 31.3
Phvul.005G017100 Phaseolus vulgaris HOM05D006426 ORTHO05D007737 5.9e-22 109.4 334 32.6
Medtr3g013540 Medicago truncatula HOM05D006426 ORTHO05D007737 9.4e-20 102.1 333 34.2
CsaV3_6G012420 Cucumis sativus L. HOM05D006426 ORTHO05D007737 1.8e-18 97.8 346 32.7
Atru.chr6.3076 Acer truncatum HOM05D006426 ORTHO05D007737 3.0e-18 97.1 206 36.9
Lalb_Chr01g0017281 Lupinus albus HOM05D006426 ORTHO05D007737 3.3e-17 93.6 337 31.5
Psat5g223040 Pisum sativum HOM05D006426 ORTHO05D007737 2.0e-14 84.3 362 31.8
Sed0009175 Sechium edule HOM05D006426 ORTHO05D007737 2.0e-14 84.3 243 32.5
Ca_18074_v3 Cicer arietinum L. HOM05D006426 ORTHO05D007737 7.7e-14 82.4 322 32.6
unitig_62.g23190 Utricularia gibba HOM05D006426 ORTHO05D007737 1.1e-12 78.6 162 35.2
TPR.G1458 Trifolium pratense HOM05D006426 ORTHO05D007737 3.2e-12 77.0 292 31.8
Lj1P736T39 Lonicera japonica HOM05D006426 ORTHO05D007737 1.2e-11 75.1 146 40.4
FvH4_6g44594 Fragaria vesca HOM05D006426 ORTHO05D007737 4.7e-11 73.2 134 35.8
HPP92_011117 Vanilla planifolia HOM05D006426 ORTHO05D007737 2.0e-09 67.8 244 28.3
SGA_v2.0_scaffold51G18895 Striga asiatica HOM05D001803 ORTHO05D001686 2.2e-08 64.3 131 40.5
CDE10G0475 Ceratophyllum demersum HOM05D006426 ORTHO05D007737 1.4e-07 61.6 271 29.5


User provided reference genes

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