Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 1.3e-105 386.3 193 100.0
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 2.4e-78 295.8 212 75.5
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 2.5e-75 285.8 193 77.7
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 6.7e-73 277.7 195 73.3
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 6.7e-73 277.7 195 73.3
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 4.8e-71 271.6 195 72.3
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 3.4e-69 265.4 195 74.4
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 8.5e-60 234.2 194 66.0
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 1.1e-59 233.8 194 65.5
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 1.9e-59 233.0 194 66.0
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 8.8e-57 224.2 191 60.7
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 1.1e-56 223.8 185 64.3
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 1.5e-56 223.4 195 62.1
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 2.0e-56 223.0 187 61.5
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 2.6e-56 222.6 198 64.6
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 3.3e-56 222.2 179 62.0
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 4.4e-56 221.9 139 76.3
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 1.7e-55 219.9 191 58.6
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 1.7e-55 219.9 137 72.3
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 6.3e-55 218.0 194 58.8
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 6.3e-55 218.0 191 58.6
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 6.3e-55 218.0 200 61.5
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 8.2e-55 217.6 192 58.9
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 2.4e-54 216.1 191 59.7
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 4.1e-54 215.3 147 68.7
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 4.1e-54 215.3 131 76.3
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 5.3e-54 214.9 129 76.7
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 5.3e-54 214.9 187 59.9
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 7.0e-54 214.5 187 59.9
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 9.1e-54 214.2 187 59.9
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 1.2e-53 213.8 185 60.0
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 1.2e-53 213.8 129 76.7
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 1.2e-53 213.8 192 58.3
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 1.2e-53 213.8 196 56.6
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 1.2e-53 213.8 132 72.0
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 1.2e-53 213.8 191 60.7
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 1.6e-53 213.4 187 59.4
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 1.6e-53 213.4 130 76.2
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 1.6e-53 213.4 129 76.7
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 2.0e-53 213.0 172 64.5
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 2.0e-53 213.0 121 78.5
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 2.6e-53 212.6 189 58.7
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 3.5e-53 212.2 130 76.2
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 3.5e-53 212.2 129 76.0
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 5.9e-53 211.5 129 75.2
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 5.9e-53 211.5 187 58.8
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 5.9e-53 211.5 136 69.9
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 7.7e-53 211.1 192 57.8
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 7.7e-53 211.1 153 63.4
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 1.0e-52 210.7 194 59.3
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 1.7e-52 209.9 187 56.1
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 1.7e-52 209.9 199 55.8
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 2.9e-52 209.1 189 57.7
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 5.0e-52 208.4 189 58.2
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 6.5e-52 208.0 189 58.2
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 6.5e-52 208.0 189 58.2
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 6.5e-52 208.0 145 64.1
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 8.5e-52 207.6 192 55.7
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 1.5e-51 206.8 166 61.4
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 1.9e-51 206.5 185 57.3
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 1.9e-51 206.5 187 58.8
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 1.9e-51 206.5 191 55.5
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 3.2e-51 205.7 191 56.5
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 4.2e-51 205.3 197 56.3
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 4.2e-51 205.3 153 64.1
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 4.2e-51 205.3 123 74.8
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 5.5e-51 204.9 138 68.1
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 5.5e-51 204.9 204 53.4
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 5.5e-51 204.9 123 74.8
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 5.5e-51 204.9 183 59.0
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 7.2e-51 204.5 186 58.6
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 7.2e-51 204.5 183 59.6
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 9.4e-51 204.1 185 56.2
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 1.2e-50 203.8 159 62.9
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 1.2e-50 203.8 125 73.6
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 1.2e-50 203.8 140 65.0
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 1.2e-50 203.8 198 56.1
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 1.2e-50 203.8 135 68.1
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 1.6e-50 203.4 195 59.5
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 2.1e-50 203.0 216 54.2
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 2.1e-50 203.0 136 65.4
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 2.1e-50 203.0 190 56.3
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 3.6e-50 202.2 111 82.9
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 4.7e-50 201.8 196 55.6
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 6.1e-50 201.4 193 55.4
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 1.4e-49 200.3 198 55.6
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 1.4e-49 200.3 184 58.7
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 1.8e-49 199.9 193 54.9
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 2.3e-49 199.5 136 65.4
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 5.2e-49 198.4 154 63.0
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 5.7e-48 194.9 212 50.9
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 5.7e-48 194.9 194 53.1
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 7.5e-48 194.5 187 54.5
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 9.7e-48 194.1 111 76.6
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 1.7e-47 193.4 192 53.6
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 2.2e-47 193.0 144 59.7
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 1.1e-46 190.7 116 76.7
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 1.4e-46 190.3 131 65.6
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 5.3e-46 188.3 167 59.9
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 4.5e-45 185.3 116 76.7
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 1.3e-44 183.7 221 51.1
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 6.5e-44 181.4 196 49.5
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 1.2e-42 177.2 120 67.5
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 8.0e-42 174.5 112 69.6
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 8.0e-42 174.5 121 62.0
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 2.3e-41 172.9 122 62.3
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 1.6e-37 160.2 91 76.9
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 3.5e-37 159.1 115 62.6
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 1.1e-35 154.1 124 59.7
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 1.1e-35 154.1 125 56.8
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 1.1e-35 154.1 155 48.4
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 2.1e-34 149.8 150 59.3
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 3.6e-34 149.1 92 76.1
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 1.8e-33 146.7 120 61.7
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 3.0e-33 146.0 109 62.4
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 5.2e-33 145.2 154 54.5
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 8.3e-31 137.9 126 59.5
Sed0008711 Sechium edule HOM05D005819 ORTHO05D006780 1.8e-30 136.7 89 66.3
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 5.4e-30 135.2 135 54.1
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 4.6e-29 132.1 147 51.7
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 1.0e-28 131.0 73 83.6
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 1.5e-27 127.1 123 45.5
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 1.9e-27 126.7 109 55.0
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 1.0e-25 120.9 115 51.3
HanXRQChr04g0112441 Helianthus annuus HOM05D005819 ORTHO05D006780 2.0e-24 116.7 81 64.2
PRCOL_00006727 Prasinoderma coloniale HOM05D005819 ORTHO05D006780 2.0e-21 106.7 97 49.5
MCO13G341 Micromonas commoda HOM05D005819 ORTHO05D006780 2.1e-18 96.7 111 43.2
HPP92_008010 Vanilla planifolia HOM05D005819 ORTHO05D006780 3.1e-17 92.8 79 58.2
COL.COLO4_13056 Corchorus olitorius HOM05D005819 ORTHO05D006780 2.2e-15 86.7 117 47.9
Cfa024975 Carpinus fangiana HOM05D005819 ORTHO05D006780 1.6e-13 80.5 111 37.8
ATR1132G123 Amborella trichopoda HOM05D005819 ORTHO05D006780 3.9e-12 75.9 61 57.4
Haze_01489 Corylus avellana HOM05D005819 ORTHO05D006780 1.4e-09 67.4 129 42.6
Actinidia30496 Actinidia chinensis HOM05D005819 ORTHO05D006780 9.9e-08 61.2 37 70.3
TAR623G0306 Trochodendron aralioides HOM05D003242 ORTHO05D003593 1.4e-06 57.4 43 55.8
Lsat_1_v5_gn_8_145740 Lactuca sativa HOM05D005244 ORTHO05D006780 7.1e-06 55.1 78 39.7


User provided reference genes

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