Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold159G37574 Striga asiatica HOM05D005385 ORTHO05D006768 1.9e-276 955.3 498 100.0
MSTRG.14146 Avicennia marina HOM05D005385 ORTHO05D006768 2.8e-123 446.4 540 51.3
Migut.H01229 Erythranthe guttata HOM05D005385 ORTHO05D006768 9.0e-122 441.4 579 49.4
SalBow1G8666 Salvia bowleyana HOM05D005385 ORTHO05D006768 1.3e-107 394.4 613 44.0
SalBow1G7937 Salvia bowleyana HOM05D005385 ORTHO05D006768 1.6e-102 377.5 614 43.8
SGA_v2.0_scaffold49G18342 Striga asiatica HOM05D005385 ORTHO05D006768 4.3e-79 299.7 256 64.5
Oeu036745.2 Olea europaea HOM05D005385 ORTHO05D006768 1.2e-73 281.6 476 42.6
Dinv39728 Davidia involucrata HOM05D005385 ORTHO05D006768 3.6e-70 270.0 528 39.4
Dinv08748 Davidia involucrata HOM05D005385 ORTHO05D006768 1.4e-69 268.1 532 39.3
CSS0010990 Camellia sinensis var. sinensis HOM05D005385 ORTHO05D006768 1.7e-67 261.2 532 38.0
Rhsim06G0165400 Rhododendron simsii HOM05D005385 ORTHO05D006768 3.7e-67 260.0 529 37.1
vmacro12184 Vaccinium macrocarpon HOM05D005385 ORTHO05D006768 5.0e-64 249.6 529 36.7
Cfa014342 Carpinus fangiana HOM05D005385 ORTHO05D006768 2.5e-63 247.3 525 36.0
Cc05_g03620 Coffea canephora HOM05D005385 ORTHO05D006768 7.3e-63 245.7 591 34.2
Haze_12803 Corylus avellana HOM05D005385 ORTHO05D006768 9.5e-63 245.4 526 36.5
Actinidia09739 Actinidia chinensis HOM05D005385 ORTHO05D006768 8.1e-62 242.3 473 36.6
Potri.002G227200 Populus trichocarpa HOM05D005385 ORTHO05D006768 3.2e-58 230.3 528 35.2
QL08p031674 Quercus lobata HOM05D005385 ORTHO05D006768 3.9e-56 223.4 532 34.6
Lj8A127T46 Lonicera japonica HOM05D005385 ORTHO05D006768 4.3e-55 219.9 614 34.0
Sabra02G0173800 Salix brachista HOM05D005385 ORTHO05D006768 8.1e-54 215.7 540 34.8
Solyc07g049750.3 Solanum lycopersicum HOM05D005385 ORTHO05D006768 2.3e-53 214.2 580 30.9
CANSAT64G0851 Cannabis sativa HOM05D005385 ORTHO05D006768 4.0e-53 213.4 525 33.9
Sopen07g025370 Solanum pennellii HOM05D005385 ORTHO05D006768 5.2e-53 213.0 580 30.9
PGSC0003DMG400001080 Solanum tuberosum HOM05D005385 ORTHO05D006768 5.2e-53 213.0 582 30.2
PGR142G3338 Punica granatum HOM05D005385 ORTHO05D006768 6.8e-53 212.6 513 33.5
Prupe.3G214000 Prunus persica HOM05D005385 ORTHO05D006768 2.0e-52 211.1 542 34.1
Nitab4.5_0008855g0010 Nicotiana tabacum HOM05D005385 ORTHO05D006768 2.6e-52 210.7 627 30.8
CSS0011006 Camellia sinensis var. sinensis HOM05D005385 ORTHO05D006768 4.4e-52 209.9 523 34.2
CAN.G290.3 Capsicum annuum HOM05D005385 ORTHO05D006768 7.1e-50 202.6 588 31.1
Manes.12G072400 Manihot esculenta HOM05D005385 ORTHO05D006768 7.8e-49 199.1 546 32.8
DCAR_021157 Daucus carota HOM05D005385 ORTHO05D006768 2.3e-48 197.6 405 37.5
CiPaw.03G158000 Carya illinoinensis HOM05D005385 ORTHO05D006768 3.9e-48 196.8 472 35.2
Nitab4.5_0004549g0030 Nicotiana tabacum HOM05D005385 ORTHO05D006768 1.5e-47 194.9 431 35.0
GSVIVG01030472001 Vitis vinifera HOM05D005385 ORTHO05D006768 5.6e-47 193.0 526 31.9
TWI75G1493 Tripterygium wilfordii HOM05D005385 ORTHO05D006768 1.2e-46 191.8 644 29.3
TWI36G1417 Tripterygium wilfordii HOM05D005385 ORTHO05D006768 2.1e-46 191.0 655 29.2
Aqoxy5G00128 Aquilegia oxysepala HOM05D005385 ORTHO05D006768 1.8e-45 188.0 519 31.4
Sed0009256 Sechium edule HOM05D005385 ORTHO05D006768 4.0e-45 186.8 534 32.2
CsaV3_2G034680 Cucumis sativus L. HOM05D005385 ORTHO05D006768 9.9e-44 182.2 516 30.4
unitig_52.g17609 Utricularia gibba HOM05D005385 ORTHO05D006768 2.2e-43 181.0 364 36.3
ClCG02G009040 Citrullus lanatus HOM05D005385 ORTHO05D006768 2.9e-43 180.6 522 32.0
TAR627G0869 Trochodendron aralioides HOM05D005385 ORTHO05D006768 3.8e-43 180.3 538 31.0
Sed0009527 Sechium edule HOM05D005385 ORTHO05D006768 1.1e-42 178.7 530 31.5
MELO3C019298.2 Cucumis melo HOM05D005385 ORTHO05D006768 2.7e-41 174.1 531 30.1
HanXRQChr16g0506711 Helianthus annuus HOM05D005385 ORTHO05D006768 1.7e-40 171.4 598 30.1
Eucgr.K00777 Eucalyptus grandis HOM05D005385 ORTHO05D006768 9.6e-39 165.6 513 30.6
Peaxi162Scf00007g00224 Petunia axillaris HOM05D005385 ORTHO05D006768 1.3e-35 155.2 727 25.4
MD09G1071600 Malus domestica HOM05D005385 ORTHO05D006768 1.7e-35 154.8 659 27.6
PSO339G4227 Papaver somniferum HOM05D005385 ORTHO05D006768 8.4e-35 152.5 493 31.0
Lsat_1_v5_gn_7_93260 Lactuca sativa HOM05D005385 ORTHO05D006768 1.4e-34 151.8 563 31.1
Lj4g0021844 Lotus japonicus HOM05D005385 ORTHO05D006768 1.4e-34 151.8 459 31.2
Glyma.18G128300 Glycine max HOM05D005385 ORTHO05D006768 1.9e-34 151.4 474 30.0
RcHm_v2.0_Chr2g0158651 Rosa chinensis HOM05D005385 ORTHO05D006768 1.9e-34 151.4 660 26.5
Psat4g129200 Pisum sativum HOM05D005385 ORTHO05D006768 2.4e-34 151.0 511 31.1
PSO384G2490 Papaver somniferum HOM05D005385 ORTHO05D006768 4.2e-34 150.2 493 30.4
Manes.13G068800 Manihot esculenta HOM05D005385 ORTHO05D006768 1.2e-33 148.7 233 38.2
TPR.G29371 Trifolium pratense HOM05D005385 ORTHO05D006768 2.7e-33 147.5 435 31.0
FvH4_6g42760 Fragaria vesca HOM05D005385 ORTHO05D006768 4.6e-33 146.7 658 26.6
FAN14G3333 Fragaria x ananassa HOM05D005385 ORTHO05D006768 7.9e-33 146.0 658 26.4
Phvul.003G071200 Phaseolus vulgaris HOM05D005385 ORTHO05D006768 7.9e-33 146.0 490 31.0
Hma1.2p1_0895F.1_g233780 Hydrangea macrophylla HOM05D005385 ORTHO05D006768 1.0e-32 145.6 306 35.9
Lalb_Chr10g0107231 Lupinus albus HOM05D005385 ORTHO05D006768 3.3e-31 140.6 498 30.3
Ca_22840_v3 Cicer arietinum L. HOM05D005385 ORTHO05D006768 7.4e-31 139.4 428 31.5
Lj1A770T48 Lonicera japonica HOM05D005385 ORTHO05D006768 1.6e-30 138.3 247 38.9
FAN05G0986 Fragaria x ananassa HOM05D005385 ORTHO05D006768 3.6e-30 137.1 658 25.8
Glyma.08G294700 Glycine max HOM05D005385 ORTHO05D006768 3.6e-30 137.1 464 28.9
Sc21g0001240 Simmondsia chinensis HOM05D005385 ORTHO05D006768 4.8e-30 136.7 538 27.7
Ciclev10014304m.g Citrus clementina HOM05D005385 ORTHO05D006768 1.4e-29 135.2 253 36.8
FAN09G2639 Fragaria x ananassa HOM05D005385 ORTHO05D006768 3.1e-29 134.0 658 26.0
Medtr8g061890 Medicago truncatula HOM05D005385 ORTHO05D006768 2.0e-28 131.3 477 29.6
arahy.Tifrunner.gnm1.ann1.1871C9 Arachis hypogaea HOM05D005385 ORTHO05D006768 2.6e-28 131.0 259 36.3
COL.COLO4_21830 Corchorus olitorius HOM05D005385 ORTHO05D006768 2.6e-28 131.0 364 32.7
arahy.Tifrunner.gnm1.ann1.N42FWL Arachis hypogaea HOM05D005385 ORTHO05D006768 3.4e-28 130.6 259 36.7
FAN02G3845 Fragaria x ananassa HOM05D005385 ORTHO05D006768 5.8e-28 129.8 658 25.4
Duzib138G1383 Durio zibethinus HOM05D005385 ORTHO05D006768 2.2e-27 127.9 493 28.2
MBI14_g48057_MAGBIO Magnolia biondii HOM05D005385 ORTHO05D006768 2.4e-26 124.4 454 27.8
MD17G1100500 Malus domestica HOM05D005385 ORTHO05D006768 2.7e-25 120.9 523 28.3
Nn8g40525 Nelumbo nucifera HOM05D005385 ORTHO05D006768 6.0e-25 119.8 257 31.9
ECA236G2918 Erigeron canadensis HOM05D005385 ORTHO05D006768 3.9e-24 117.1 393 31.8
THA.LOC104801549 Tarenaya hassleriana HOM05D005385 ORTHO05D006768 1.9e-23 114.8 688 24.4
Atru.chr6.3225 Acer truncatum HOM05D005385 ORTHO05D006768 3.3e-23 114.0 491 27.1
Carub.0001s0438 Capsella rubella HOM05D005385 ORTHO05D006768 5.6e-23 113.2 693 24.0
Duzib133G0129 Durio zibethinus HOM05D005385 ORTHO05D006768 1.3e-22 112.1 352 29.8
Thecc.01G177600 Theobroma cacao HOM05D005385 ORTHO05D006768 1.3e-22 112.1 476 27.5
Sp1g03960 Schrenkiella parvula HOM05D005385 ORTHO05D006768 6.2e-22 109.8 226 35.0
AL1G14860 Arabidopsis lyrata HOM05D005385 ORTHO05D006768 8.1e-22 109.4 718 23.1
Aa31LG1G19650 Aethionema arabicum HOM05D005385 ORTHO05D006768 5.3e-21 106.7 669 24.2
Ah.03g136860 Amaranthus hybridus HOM05D005385 ORTHO05D006768 5.3e-21 106.7 488 26.2
Gohir.D07G088200 Gossypium hirsutum HOM05D005385 ORTHO05D006768 1.5e-20 105.1 489 26.2
CARHR004550 Cardamine hirsuta HOM05D005385 ORTHO05D006768 4.5e-20 103.6 221 33.0
AT1G05087 Arabidopsis thaliana HOM05D005385 ORTHO05D006768 5.8e-20 103.2 245 32.2
Thhalv10006711m.g Eutrema salsugineum HOM05D005385 ORTHO05D006768 5.8e-20 103.2 226 34.5
CSS0039058 Camellia sinensis var. sinensis HOM05D005385 ORTHO05D006768 7.6e-20 102.8 292 31.8
EL10Ac6g14187 Beta vulgaris HOM05D005385 ORTHO05D006768 1.0e-19 102.4 497 29.0
BcaC07g36864 Brassica carinata HOM05D005385 ORTHO05D006768 1.7e-19 101.7 404 27.0
Gorai.001G094400 Gossypium raimondii HOM05D005385 ORTHO05D006768 1.7e-19 101.7 451 27.7
Nitab4.5_0000130g0270 Nicotiana tabacum HOM05D005385 ORTHO05D006768 1.7e-19 101.7 518 25.7
AUR62043283 Chenopodium quinoa HOM05D005385 ORTHO05D006768 2.9e-19 100.9 414 28.3
Gohir.A07G081700 Gossypium hirsutum HOM05D005385 ORTHO05D006768 3.8e-19 100.5 534 26.0
Duzib211G0060 Durio zibethinus HOM05D005385 ORTHO05D006768 8.4e-19 99.4 392 27.8
C05p03280 Brassica napus HOM05D005385 ORTHO05D006768 1.1e-18 99.0 222 34.7
BraA10t42636Z Brassica rapa HOM05D005385 ORTHO05D006768 1.1e-18 99.0 222 35.1
Rhsim06G0165100 Rhododendron simsii HOM05D005385 ORTHO05D006768 1.1e-18 99.0 342 29.2
BcaB02g06881 Brassica carinata HOM05D005385 ORTHO05D006768 1.4e-18 98.6 222 38.3
BolC5t29109H Brassica oleracea HOM05D005385 ORTHO05D006768 3.2e-18 97.4 222 34.2
C08p01740 Brassica napus HOM05D005385 ORTHO05D006768 2.1e-17 94.7 158 39.2
MD17G1100200 Malus domestica HOM05D005385 ORTHO05D006768 2.7e-17 94.4 204 36.3
Sc06g0009590 Simmondsia chinensis HOM05D005385 ORTHO05D006768 4.6e-17 93.6 143 34.3
BcaC05g24419 Brassica carinata HOM05D005385 ORTHO05D006768 1.0e-16 92.4 679 23.9
AUR62043954 Chenopodium quinoa HOM05D005385 ORTHO05D006768 1.8e-16 91.7 399 27.6
A08p36580 Brassica napus HOM05D005385 ORTHO05D006768 3.0e-16 90.9 676 23.4
BolC8t46974H Brassica oleracea HOM05D005385 ORTHO05D006768 3.0e-16 90.9 672 23.5
CDE02G3131 Ceratophyllum demersum HOM05D005385 ORTHO05D006768 1.9e-15 88.2 269 30.9
A10p03600 Brassica napus HOM05D005385 ORTHO05D006768 1.3e-14 85.5 686 23.2
BraA08t35560Z Brassica rapa HOM05D005385 ORTHO05D006768 6.3e-14 83.2 676 22.8
DCAR_021158 Daucus carota HOM05D005385 ORTHO05D006768 1.5e-12 78.6 256 32.0
VMungo0251G1899 Vigna mungo HOM05D005385 ORTHO05D006768 1.5e-12 78.6 103 39.8
AT4G20720 Arabidopsis thaliana HOM05D005385 ORTHO05D006768 6.5e-11 73.2 359 25.9
CDE05G0211 Ceratophyllum demersum HOM05D005385 ORTHO05D006768 6.5e-11 73.2 434 27.4
Rhsim06G0164700 Rhododendron simsii HOM05D005385 ORTHO05D006768 1.4e-10 72.0 368 28.0
RhsimUnG0010700 Rhododendron simsii HOM05D005385 ORTHO05D006768 1.4e-10 72.0 368 28.0
Lj1P773T39 Lonicera japonica HOM05D005385 ORTHO05D006768 1.9e-10 71.6 101 41.6
AT1G05090 Arabidopsis thaliana HOM05D005385 ORTHO05D006768 9.3e-10 69.3 345 25.8
MD17G1100100 Malus domestica HOM05D005385 ORTHO05D006768 2.2e-06 58.2 172 33.1


User provided reference genes

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