Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold159G37554 Striga asiatica HOM05D003996 ORTHO05D004665 0.0e+00 1458.7 739 100.0
Migut.H01245 Erythranthe guttata HOM05D003996 ORTHO05D004665 1.3e-281 973.0 683 74.7
MSTRG.14132 Avicennia marina HOM05D003996 ORTHO05D004665 4.3e-277 958.0 666 74.3
SalBow7G2067 Salvia bowleyana HOM05D003996 ORTHO05D004665 3.5e-223 778.9 742 57.4
Oeu046908.1 Olea europaea HOM05D003996 ORTHO05D004665 1.6e-220 770.0 619 65.1
SGA_v2.0_scaffold70G23382 Striga asiatica HOM05D003996 ORTHO05D004665 5.0e-209 731.9 645 62.3
PGSC0003DMG400000690 Solanum tuberosum HOM05D003996 ORTHO05D004665 2.5e-208 729.6 657 60.4
Sopen07g024690 Solanum pennellii HOM05D003996 ORTHO05D004665 3.2e-208 729.2 657 60.3
Dinv39747 Davidia involucrata HOM05D003996 ORTHO05D004665 7.9e-207 724.5 640 59.5
Solyc07g049350.3 Solanum lycopersicum HOM05D003996 ORTHO05D004665 3.0e-206 722.6 657 59.5
Thecc.01G181600 Theobroma cacao HOM05D003996 ORTHO05D004665 6.7e-206 721.5 647 59.5
Sabra14G0120200 Salix brachista HOM05D003996 ORTHO05D004665 3.3e-205 719.2 662 57.7
CAN.G1493.1 Capsicum annuum HOM05D003996 ORTHO05D004665 5.7e-205 718.4 670 58.7
Migut.M00422 Erythranthe guttata HOM05D003996 ORTHO05D004665 6.3e-204 714.9 655 58.8
Potri.002G224900 Populus trichocarpa HOM05D003996 ORTHO05D004665 8.2e-204 714.5 640 58.3
Gorai.001G196200 Gossypium raimondii HOM05D003996 ORTHO05D004665 1.8e-203 713.4 675 57.6
Hma1.2p1_0177F.1_g078040 Hydrangea macrophylla HOM05D003996 ORTHO05D004665 1.8e-203 713.4 625 60.0
Oeu010926.4 Olea europaea HOM05D003996 ORTHO05D004665 1.8e-203 713.4 605 62.6
DCAR_012922 Daucus carota HOM05D003996 ORTHO05D004665 2.4e-203 713.0 647 59.5
Dinv08722 Davidia involucrata HOM05D003996 ORTHO05D004665 4.1e-203 712.2 587 62.9
Potri.014G158200 Populus trichocarpa HOM05D003996 ORTHO05D004665 9.1e-203 711.1 665 57.6
HanXRQChr16g0506421 Helianthus annuus HOM05D003996 ORTHO05D004665 1.2e-202 710.7 642 56.9
Duzib138G0037 Durio zibethinus HOM05D003996 ORTHO05D004665 2.0e-202 709.9 625 61.0
Ciclev10014490m.g Citrus clementina HOM05D003996 ORTHO05D004665 1.0e-201 707.6 655 58.3
Rhsim04G0050600 Rhododendron simsii HOM05D003996 ORTHO05D004665 2.2e-201 706.4 678 55.9
QL08p030755 Quercus lobata HOM05D003996 ORTHO05D004665 5.0e-201 705.3 667 58.2
TWI75G1163 Tripterygium wilfordii HOM05D003996 ORTHO05D004665 8.5e-201 704.5 668 56.6
Lsat_1_v5_gn_7_95060 Lactuca sativa HOM05D003996 ORTHO05D004665 9.4e-200 701.0 632 57.9
TWI36G0149 Tripterygium wilfordii HOM05D003996 ORTHO05D004665 9.4e-200 701.0 657 57.4
Nitab4.5_0000482g0250 Nicotiana tabacum HOM05D003996 ORTHO05D004665 1.6e-199 700.3 653 60.0
Peaxi162Scf00921g00252 Petunia axillaris HOM05D003996 ORTHO05D004665 1.4e-198 697.2 645 59.8
PSO210G1396 Papaver somniferum HOM05D003996 ORTHO05D004665 1.5e-197 693.7 645 58.1
Cc05_g02970 Coffea canephora HOM05D003996 ORTHO05D004665 2.0e-197 693.3 638 58.5
MBI16_g26185_MAGBIO Magnolia biondii HOM05D003996 ORTHO05D004665 3.3e-197 692.6 647 57.5
vmacro09358 Vaccinium macrocarpon HOM05D003996 ORTHO05D004665 1.3e-196 690.6 653 57.1
Hma1.2p1_2319F.1_g319820 Hydrangea macrophylla HOM05D003996 ORTHO05D004665 2.4e-195 686.4 653 56.8
Nitab4.5_0008863g0010 Nicotiana tabacum HOM05D003996 ORTHO05D004665 5.3e-195 685.3 651 59.1
Aqoxy1G02929 Aquilegia oxysepala HOM05D003996 ORTHO05D004665 7.0e-195 684.9 646 57.4
Nn1g07292 Nelumbo nucifera HOM05D003996 ORTHO05D004665 7.0e-195 684.9 654 55.5
PSO832G2142 Papaver somniferum HOM05D003996 ORTHO05D004665 9.1e-195 684.5 646 57.6
CANSAT64G2545 Cannabis sativa HOM05D003996 ORTHO05D004665 3.5e-194 682.6 640 56.2
ECA234G3864 Erigeron canadensis HOM05D003996 ORTHO05D004665 1.3e-193 680.6 631 55.5
Sed0004670 Sechium edule HOM05D003996 ORTHO05D004665 2.2e-193 679.9 656 55.2
Atru.chr6.3252 Acer truncatum HOM05D003996 ORTHO05D004665 3.8e-193 679.1 668 55.2
Gohir.A07G168800 Gossypium hirsutum HOM05D003996 ORTHO05D004665 2.7e-191 672.9 658 57.3
Gorai.001G095400 Gossypium raimondii HOM05D003996 ORTHO05D004665 3.6e-191 672.5 665 56.1
GSVIVG01030501001 Vitis vinifera HOM05D003996 ORTHO05D004665 6.1e-191 671.8 646 56.5
Gohir.D07G089000 Gossypium hirsutum HOM05D003996 ORTHO05D004665 1.0e-190 671.0 665 56.1
Gohir.D07G175200 Gossypium hirsutum HOM05D003996 ORTHO05D004665 5.2e-190 668.7 675 55.7
AUR62032475 Chenopodium quinoa HOM05D003996 ORTHO05D004665 6.8e-190 668.3 625 59.0
Lj6g0017826 Lotus japonicus HOM05D003996 ORTHO05D004665 2.0e-189 666.8 637 55.3
Duzib211G0403 Durio zibethinus HOM05D003996 ORTHO05D004665 3.4e-189 666.0 656 57.2
ClCG02G018060 Citrullus lanatus HOM05D003996 ORTHO05D004665 6.3e-188 661.8 685 53.1
Hund15359 Selenicereus undatus HOM05D003996 ORTHO05D004665 8.3e-188 661.4 626 56.7
Actinidia10801 Actinidia chinensis HOM05D003996 ORTHO05D004665 9.1e-187 657.9 596 58.4
CsaV3_6G015350 Cucumis sativus L. HOM05D003996 ORTHO05D004665 5.9e-186 655.2 681 52.0
Lj1C780G17 Lonicera japonica HOM05D003996 ORTHO05D004665 2.2e-185 653.3 576 60.1
Thhalv10016338m.g Eutrema salsugineum HOM05D003996 ORTHO05D004665 5.0e-185 652.1 659 52.5
MELO3C019738.2 Cucumis melo HOM05D003996 ORTHO05D004665 1.1e-184 651.0 644 54.5
Medtr3g080400 Medicago truncatula HOM05D003996 ORTHO05D004665 1.9e-184 650.2 642 54.7
DCAR_021140 Daucus carota HOM05D003996 ORTHO05D004665 2.5e-184 649.8 709 51.5
Manes.12G069800 Manihot esculenta HOM05D003996 ORTHO05D004665 5.5e-184 648.7 665 53.7
THA.LOC104801005 Tarenaya hassleriana HOM05D003996 ORTHO05D004665 1.6e-183 647.1 631 54.0
ECA236G3366 Erigeron canadensis HOM05D003996 ORTHO05D004665 3.6e-183 646.0 645 56.4
PSO541G1393 Papaver somniferum HOM05D003996 ORTHO05D004665 1.8e-182 643.7 655 52.2
Gohir.A07G082500 Gossypium hirsutum HOM05D003996 ORTHO05D004665 3.0e-182 642.9 665 54.9
PSO675G0796 Papaver somniferum HOM05D003996 ORTHO05D004665 3.0e-182 642.9 655 51.9
AUR62040130 Chenopodium quinoa HOM05D003996 ORTHO05D004665 5.2e-182 642.1 625 58.1
Ah.03g136730 Amaranthus hybridus HOM05D003996 ORTHO05D004665 1.3e-180 637.5 630 57.1
THA.LOC104826134 Tarenaya hassleriana HOM05D003996 ORTHO05D004665 1.3e-180 637.5 665 51.3
Eucgr.K00757 Eucalyptus grandis HOM05D003996 ORTHO05D004665 6.3e-180 635.2 674 51.2
CARHR126920 Cardamine hirsuta HOM05D003996 ORTHO05D004665 1.2e-178 630.9 667 50.2
Phvul.006G012800 Phaseolus vulgaris HOM05D003996 ORTHO05D004665 1.2e-178 630.9 681 51.7
Prupe.3G210900 Prunus persica HOM05D003996 ORTHO05D004665 1.2e-178 630.9 763 47.7
PGR142G3363 Punica granatum HOM05D003996 ORTHO05D004665 1.2e-178 630.9 670 51.3
MD09G1113700 Malus domestica HOM05D003996 ORTHO05D004665 5.9e-178 628.6 708 50.6
BolC3t14538H Brassica oleracea HOM05D003996 ORTHO05D004665 7.7e-178 628.2 658 51.5
FAN14G1081 Fragaria x ananassa HOM05D003996 ORTHO05D004665 7.7e-178 628.2 678 53.5
HanXRQChr10g0310161 Helianthus annuus HOM05D003996 ORTHO05D004665 7.7e-178 628.2 635 54.5
BcaC01g05877 Brassica carinata HOM05D003996 ORTHO05D004665 1.3e-177 627.5 669 51.0
VMungo0540G1114 Vigna mungo HOM05D003996 ORTHO05D004665 1.3e-177 627.5 670 50.9
C03p21510 Brassica napus HOM05D003996 ORTHO05D004665 1.7e-177 627.1 659 51.3
FvH4_6g42290 Fragaria vesca HOM05D003996 ORTHO05D004665 1.7e-177 627.1 678 52.9
RcHm_v2.0_Chr2g0158131 Rosa chinensis HOM05D003996 ORTHO05D004665 2.9e-177 626.3 701 51.5
Ca_16283_v3 Cicer arietinum L. HOM05D003996 ORTHO05D004665 3.8e-177 625.9 586 56.5
EL10Ac6g13970 Beta vulgaris HOM05D003996 ORTHO05D004665 5.0e-177 625.5 590 55.4
TPR.G29036 Trifolium pratense HOM05D003996 ORTHO05D004665 6.6e-177 625.2 638 52.5
A03p18420 Brassica napus HOM05D003996 ORTHO05D004665 8.6e-177 624.8 656 51.4
Sp4g15330 Schrenkiella parvula HOM05D003996 ORTHO05D004665 8.6e-177 624.8 644 51.7
Lalb_Chr18g0049761 Lupinus albus HOM05D003996 ORTHO05D004665 3.3e-176 622.9 625 54.7
HanXRQChr10g0306531 Helianthus annuus HOM05D003996 ORTHO05D004665 2.1e-175 620.2 675 50.1
Haze_12770 Corylus avellana HOM05D003996 ORTHO05D004665 8.0e-175 618.2 547 58.5
arahy.Tifrunner.gnm1.ann1.LM4IV6 Arachis hypogaea HOM05D003996 ORTHO05D004665 1.0e-174 617.8 664 50.9
AL4G28490 Arabidopsis lyrata HOM05D003996 ORTHO05D004665 1.4e-174 617.5 668 49.6
Sabra02G0172000 Salix brachista HOM05D003996 ORTHO05D004665 1.8e-174 617.1 673 51.0
ECA240G4712 Erigeron canadensis HOM05D003996 ORTHO05D004665 5.2e-174 615.5 678 52.4
CSS0033567 Camellia sinensis var. sinensis HOM05D003996 ORTHO05D004665 4.4e-173 612.5 584 57.0
Manes.13G066300 Manihot esculenta HOM05D003996 ORTHO05D004665 9.8e-173 611.3 609 54.5
Lalb_Chr15g0080851 Lupinus albus HOM05D003996 ORTHO05D004665 1.3e-172 610.9 633 53.7
FAN02G1294 Fragaria x ananassa HOM05D003996 ORTHO05D004665 3.7e-172 609.4 695 50.6
AT2G32970 Arabidopsis thaliana HOM05D003996 ORTHO05D004665 1.1e-171 607.8 655 50.1
FAN09G4790 Fragaria x ananassa HOM05D003996 ORTHO05D004665 1.8e-171 607.1 710 50.3
FAN05G2256 Fragaria x ananassa HOM05D003996 ORTHO05D004665 5.4e-171 605.5 693 50.9
TAR626G1560 Trochodendron aralioides HOM05D003996 ORTHO05D004665 9.2e-171 604.7 655 53.9
Lsat_1_v5_gn_5_124380 Lactuca sativa HOM05D003996 ORTHO05D004665 2.7e-170 603.2 625 52.3
Aa31LG5G4630 Aethionema arabicum HOM05D003996 ORTHO05D004665 2.9e-169 599.7 662 48.9
BcaB01g03955 Brassica carinata HOM05D003996 ORTHO05D004665 3.6e-167 592.8 661 48.9
MD17G1103800 Malus domestica HOM05D003996 ORTHO05D004665 6.2e-167 592.0 708 49.0
Nn1g03381 Nelumbo nucifera HOM05D003996 ORTHO05D004665 2.4e-163 580.1 650 50.5
Glyma.20G056800 Glycine max HOM05D003996 ORTHO05D004665 4.1e-163 579.3 694 49.9
Lsat_1_v5_gn_9_105800 Lactuca sativa HOM05D003996 ORTHO05D004665 1.2e-162 577.8 677 48.4
Psat5g111680 Pisum sativum HOM05D003996 ORTHO05D004665 1.6e-162 577.4 637 50.5
Carub.0004s1441 Capsella rubella HOM05D003996 ORTHO05D004665 4.6e-162 575.9 672 48.8
unitig_26.g9924 Utricularia gibba HOM05D003996 ORTHO05D004665 1.1e-160 571.2 502 60.8
Lj8A129T88 Lonicera japonica HOM05D003996 ORTHO05D004665 7.3e-160 568.5 687 48.8
A05p12660 Brassica napus HOM05D003996 ORTHO05D004665 1.8e-158 563.9 636 48.3
Sed0016081 Sechium edule HOM05D003996 ORTHO05D004665 5.2e-158 562.4 596 52.3
BraA05t20204Z Brassica rapa HOM05D003996 ORTHO05D004665 9.8e-157 558.1 637 48.2
Zm00001eb256350 Zea mays HOM05D003996 ORTHO05D004665 1.7e-156 557.4 679 47.0
arahy.Tifrunner.gnm1.ann1.ZWYX82 Arachis hypogaea HOM05D003996 ORTHO05D004665 4.6e-154 549.3 621 49.6
C04p16550 Brassica napus HOM05D003996 ORTHO05D004665 1.7e-153 547.4 637 47.7
BcaC02g11363 Brassica carinata HOM05D003996 ORTHO05D004665 2.3e-153 547.0 637 47.7
SHI10040 Sapria himalayana HOM05D003996 ORTHO05D000023 3.0e-153 546.6 663 47.7
BraA03t11105Z Brassica rapa HOM05D003996 ORTHO05D004665 6.2e-151 538.9 653 46.4
HPP92_010852 Vanilla planifolia HOM05D003996 ORTHO05D004665 1.2e-149 534.6 671 45.9
BolC4t23207H Brassica oleracea HOM05D003996 ORTHO05D004665 2.9e-148 530.0 646 46.1
Os02g0771800 Oryza sativa ssp. japonica HOM05D003996 ORTHO05D004665 3.5e-146 523.1 665 44.5
CDE07G0144 Ceratophyllum demersum HOM05D003996 ORTHO05D004665 3.9e-145 519.6 705 43.4
Sc06g0009640 Simmondsia chinensis HOM05D003996 ORTHO05D004665 1.6e-143 514.2 516 53.5
CiPaw.04G110600 Carya illinoinensis HOM05D003996 ORTHO05D004665 1.4e-139 501.1 499 55.1
DCAR_023146 Daucus carota HOM05D003996 ORTHO05D004665 8.1e-135 485.3 713 42.6
Glyma.13G026700 Glycine max HOM05D003996 ORTHO05D004665 7.6e-133 478.8 439 59.7
BcaNung06410 Brassica carinata HOM05D003996 ORTHO05D004665 2.5e-128 463.8 657 43.5
COL.COLO4_21871 Corchorus olitorius HOM05D003996 ORTHO05D004665 7.9e-114 415.6 403 58.1
Sc05g0002040 Simmondsia chinensis HOM05D003996 ORTHO05D004665 3.9e-113 413.3 623 42.5
BcaB02g10511 Brassica carinata HOM05D003996 ORTHO05D004665 4.8e-111 406.4 488 45.9
SEGI_14118 Sequoiadendron giganteum HOM05D003996 ORTHO05D004665 1.1e-110 405.2 712 37.2
Duzib133G0500 Durio zibethinus HOM05D003996 ORTHO05D004665 2.7e-106 390.6 617 38.6
CANSAT01G0074 Cannabis sativa HOM05D003996 ORTHO05D004665 6.7e-105 386.0 647 38.0
CiPaw.03G155400 Carya illinoinensis HOM05D003996 ORTHO05D004665 1.9e-99 367.9 361 55.7
EL10Ac7g17863 Beta vulgaris HOM05D003996 ORTHO05D004665 4.2e-99 366.7 650 37.5
GSVIVG01003286001 Vitis vinifera HOM05D003996 ORTHO05D004665 2.3e-97 360.9 613 39.0
AUR62001107 Chenopodium quinoa HOM05D003996 ORTHO05D004665 3.9e-97 360.1 642 36.8
AUR62008931 Chenopodium quinoa HOM05D003996 ORTHO05D004665 7.4e-96 355.9 659 35.8
Pp3c17_9940 Physcomitrium patens HOM05D003996 ORTHO05D004665 1.4e-89 335.1 710 34.1
SMO361G0133 Selaginella moellendorffii HOM05D003996 ORTHO05D004665 3.9e-89 333.6 630 36.5
Hund18404 Selenicereus undatus HOM05D003996 ORTHO05D004665 4.4e-88 330.1 635 36.4
CANSAT01G3237 Cannabis sativa HOM05D003996 ORTHO05D004665 6.5e-84 316.2 477 39.8
Manes.13G046600 Manihot esculenta HOM05D003996 ORTHO05D004665 5.5e-83 313.2 547 38.0
Pp3c9_1750 Physcomitrium patens HOM05D003996 ORTHO05D004665 3.6e-82 310.5 738 32.8
Mapoly0071s0059 Marchantia polymorpha HOM05D003996 ORTHO05D004665 1.1e-78 298.9 796 31.7
HPP92_011782 Vanilla planifolia HOM05D003996 ORTHO05D004665 7.7e-77 292.7 346 47.1
Zm00001eb297890 Zea mays HOM05D003996 ORTHO05D004665 3.2e-75 287.3 545 34.9
AagrBONN_evm.TU.Sc2ySwM_368.1061 Anthoceros agrestis HOM05D003996 ORTHO05D004665 6.1e-74 283.1 729 30.7
Ah.08g214450 Amaranthus hybridus HOM05D003996 ORTHO05D004665 2.3e-73 281.2 507 37.1
Hund05567 Selenicereus undatus HOM05D003996 ORTHO05D004665 1.2e-66 258.8 509 34.2
COL.COLO4_21870 Corchorus olitorius HOM05D003996 ORTHO05D004665 1.4e-65 255.4 192 66.7
CiPaw.03G155500 Carya illinoinensis HOM05D003996 ORTHO05D004665 3.0e-65 254.2 196 66.8
Cpa.g.sc132.19 Carica papaya HOM05D003996 ORTHO05D004665 7.7e-61 239.6 284 50.7
CBR_g29855 Chara braunii HOM05D003996 ORTHO05D004665 4.6e-53 213.8 331 35.3
Actinidia03595 Actinidia chinensis HOM05D003996 ORTHO05D004665 4.7e-26 124.0 95 64.2
Thecc.01G223400 Theobroma cacao HOM05D003996 ORTHO05D004665 4.0e-25 120.9 195 39.0
Actinidia03596 Actinidia chinensis HOM05D003996 ORTHO05D004665 2.0e-24 118.6 227 33.0
Actinidia03594 Actinidia chinensis HOM05D003996 ORTHO05D004665 1.3e-23 115.9 116 51.7
Hund15378 Selenicereus undatus HOM05D003996 ORTHO05D004665 6.6e-20 103.6 111 53.2
unitig_26.g9925 Utricularia gibba HOM05D003996 ORTHO05D004665 9.3e-14 83.2 49 77.6
MCO15G069 Micromonas commoda HOM05D003996 ORTHO05D004665 1.0e-12 79.7 163 33.1
Cre12.g513852 Chlamydomonas reinhardtii HOM05D003996 ORTHO05D004665 3.0e-12 78.2 151 37.1
CiPaw.04G110700 Carya illinoinensis HOM05D003996 ORTHO05D004665 9.0e-09 66.6 44 72.7
C09p40870 Brassica napus HOM05D003996 ORTHO05D004665 7.6e-08 63.5 48 66.7
BcaC09g50171 Brassica carinata HOM05D003996 ORTHO05D092235 9.9e-08 63.2 49 59.2


User provided reference genes

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