Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 0.0e+00 1090.9 539 100.0
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 1.3e-206 723.4 535 69.5
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 2.9e-206 722.2 539 68.8
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 3.7e-169 599.0 529 56.5
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 3.4e-167 592.4 536 56.9
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 3.4e-167 592.4 541 57.5
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 6.5e-166 588.2 538 57.1
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 1.2e-164 583.9 538 56.7
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 1.4e-160 570.5 529 56.1
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 1.8e-160 570.1 529 56.3
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 5.3e-160 568.5 539 54.7
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 1.2e-159 567.4 535 55.0
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 2.6e-159 566.2 535 54.8
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 2.6e-159 566.2 534 55.1
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 1.3e-158 563.9 517 59.4
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 1.3e-158 563.9 529 56.3
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 2.2e-158 563.1 540 53.9
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 1.2e-156 557.4 538 54.6
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 6.1e-156 555.1 540 53.0
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 6.1e-156 555.1 541 54.3
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 7.9e-156 554.7 535 54.0
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 7.9e-156 554.7 535 54.0
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 1.7e-153 547.0 533 53.5
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 1.4e-152 543.9 512 55.5
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 9.1e-152 541.2 545 53.0
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 1.4e-149 533.9 540 52.2
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 1.6e-148 530.4 537 50.3
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 2.7e-148 529.6 533 52.3
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 1.0e-147 527.7 535 52.5
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 1.0e-147 527.7 536 52.1
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 1.5e-146 523.9 536 52.1
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 2.8e-145 519.6 539 52.1
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 2.8e-145 519.6 530 51.1
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 1.1e-144 517.7 537 50.8
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 1.4e-144 517.3 530 51.1
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 1.8e-144 516.9 534 50.2
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 1.8e-144 516.9 531 49.9
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 7.0e-144 515.0 459 57.5
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 1.6e-143 513.8 532 51.1
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 5.9e-143 511.9 513 53.8
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 1.3e-142 510.8 537 50.3
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 1.5e-141 507.3 531 50.1
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 5.5e-141 505.4 536 50.0
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 5.5e-141 505.4 544 50.4
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 1.2e-140 504.2 536 50.4
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 1.4e-139 500.7 527 52.8
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 2.3e-139 500.0 516 51.7
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 3.0e-139 499.6 529 50.9
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 8.8e-139 498.0 535 51.4
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 1.2e-138 497.7 517 52.4
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 1.2e-138 497.7 538 48.7
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 4.1e-136 489.2 514 50.4
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 1.0e-134 484.6 544 50.2
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 2.2e-134 483.4 546 48.4
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 3.8e-134 482.6 538 48.9
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 6.5e-134 481.9 516 50.2
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 1.1e-133 481.1 517 51.6
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 1.5e-133 480.7 534 47.8
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 5.5e-133 478.8 532 47.4
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 1.6e-132 477.2 518 49.6
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 2.7e-132 476.5 538 48.3
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 6.3e-129 465.3 533 48.0
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 8.3e-129 464.9 539 46.8
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 8.3e-129 464.9 540 46.7
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 5.4e-128 462.2 530 47.2
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 9.1e-128 461.5 538 46.8
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 1.2e-127 461.1 536 47.9
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 1.6e-127 460.7 515 48.0
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 1.7e-126 457.2 513 49.1
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 1.7e-126 457.2 532 46.4
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 2.3e-126 456.8 537 47.1
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 3.8e-126 456.1 514 49.0
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 1.1e-125 454.5 536 47.2
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 1.6e-124 450.7 535 46.7
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 3.6e-124 449.5 535 46.5
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 1.0e-123 448.0 531 45.8
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 1.4e-123 447.6 524 49.4
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 4.0e-123 446.0 529 47.1
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 5.2e-123 445.7 539 45.6
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 5.2e-123 445.7 536 44.4
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 8.9e-123 444.9 534 45.5
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 1.3e-121 441.0 526 46.0
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 3.7e-121 439.5 514 47.3
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 8.3e-121 438.3 531 45.0
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 4.1e-120 436.0 514 47.9
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 9.2e-120 434.9 530 46.6
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 1.2e-119 434.5 515 47.8
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 7.8e-119 431.8 514 47.1
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 2.3e-118 430.3 514 46.5
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 6.6e-118 428.7 513 47.6
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 8.6e-118 428.3 401 54.9
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 1.0e-115 421.4 531 44.8
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 3.1e-115 419.9 485 49.1
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 2.2e-113 413.7 361 57.9
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 5.0e-110 402.5 531 42.9
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 1.5e-109 401.0 397 52.6
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 1.2e-103 381.3 327 63.3
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 2.1e-100 370.5 541 40.7
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 2.1e-100 370.5 509 42.2
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 1.7e-97 360.9 411 47.2
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 2.1e-92 344.0 347 51.9
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 1.4e-91 341.3 354 49.4
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 1.6e-79 301.2 270 54.8
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 3.4e-66 256.9 238 55.9
Mapoly0109s0061 Marchantia polymorpha HOM05D006455 ORTHO05D008098 7.9e-63 245.7 553 30.7
Manes.12G057503 Manihot esculenta HOM05D006455 ORTHO05D008098 1.8e-59 234.6 190 58.4
Manes.12G057505 Manihot esculenta HOM05D006455 ORTHO05D008098 1.8e-59 234.6 190 58.4
SMO200G0077 Selaginella moellendorffii HOM05D006455 ORTHO05D008098 1.9e-56 224.6 533 31.5
Pp3c10_13370 Physcomitrium patens HOM05D006455 ORTHO05D008098 2.1e-55 221.1 556 30.2
CDE05G1197 Ceratophyllum demersum HOM05D006455 ORTHO05D008098 1.5e-53 214.9 233 47.2
AagrBONN_evm.TU.Sc2ySwM_228.5553 Anthoceros agrestis HOM05D006455 ORTHO05D008098 5.3e-43 179.9 454 28.2
Manes.12G057504 Manihot esculenta HOM05D006455 ORTHO05D008098 2.5e-40 171.0 196 48.0
CBR_g48756 Chara braunii HOM05D006455 ORTHO05D000497 3.9e-38 163.7 507 27.2
Oeu030354.1 Olea europaea HOM05D006455 ORTHO05D008098 1.1e-37 162.2 116 69.0
PGSC0003DMG400020304 Solanum tuberosum HOM05D006455 ORTHO05D008098 1.8e-30 138.3 116 59.5
Manes.12G060108 Manihot esculenta HOM05D006455 ORTHO05D008098 2.0e-29 134.8 175 45.1
Zm00001eb128100 Zea mays HOM05D006455 ORTHO05D008098 6.5e-25 119.8 161 41.6
Oeu003682.1 Olea europaea HOM05D006455 ORTHO05D008098 3.2e-24 117.5 119 55.5
Zm00001eb274660 Zea mays HOM05D006455 ORTHO05D008098 2.1e-23 114.8 161 40.4
EL10Ac5g10574 Beta vulgaris HOM05D006455 ORTHO05D008098 6.1e-23 113.2 116 47.4
Phvul.003G297266 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 1.8e-22 111.7 117 47.0
Zm00001eb128090 Zea mays HOM05D006455 ORTHO05D008098 7.7e-18 96.3 173 32.9
Cre03.g197250 Chlamydomonas reinhardtii HOM05D006455 ORTHO05D008098 2.5e-16 91.3 240 27.9
Actinidia33399 Actinidia chinensis HOM05D006455 ORTHO05D008098 3.5e-10 70.9 48 60.4
SGA_v2.0_scaffold483G52344 Striga asiatica HOM05D005137 ORTHO05D008098 7.7e-10 69.7 98 44.9
SGA_v2.0_scaffold1053G53813 Striga asiatica HOM05D005137 ORTHO05D006478 1.5e-08 65.5 88 46.6
SGA_v2.0_scaffold386G50489 Striga asiatica HOM05D005137 ORTHO05D006478 3.3e-08 64.3 82 47.6


User provided reference genes

Program Settings