Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold158G37494 Striga asiatica HOM05D000017 ORTHO05D000013 9.0e-153 543.5 265 100.0
CANSAT56G3886 Cannabis sativa HOM05D000017 ORTHO05D000013 1.9e-17 94.0 161 36.0
CANSAT21G2557 Cannabis sativa HOM05D000017 ORTHO05D000013 6.1e-16 89.0 180 32.2
CANSAT80G0400 Cannabis sativa HOM05D000017 ORTHO05D000013 2.3e-15 87.0 175 32.6
CANSAT80G0333 Cannabis sativa HOM05D000017 ORTHO05D000013 3.0e-15 86.7 186 32.8
SGA_v2.0_scaffold444G51711 Striga asiatica HOM05D000768 ORTHO05D000665 3.0e-15 86.7 80 53.8
CANSAT21G2295 Cannabis sativa HOM05D000017 ORTHO05D000013 8.8e-15 85.1 162 32.7
CANSAT54G1361 Cannabis sativa HOM05D000017 ORTHO05D000013 8.8e-15 85.1 211 29.9
CANSAT35G1386 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-14 84.0 211 28.4
CANSAT64G1942 Cannabis sativa HOM05D000017 ORTHO05D000013 7.4e-14 82.0 207 29.0
CANSAT21G0526 Cannabis sativa HOM05D000017 ORTHO05D000013 2.8e-13 80.1 188 32.4
CANSAT80G0531 Cannabis sativa HOM05D000017 ORTHO05D000013 3.7e-13 79.7 210 28.6
CANSAT01G2945 Cannabis sativa HOM05D000017 ORTHO05D000013 8.2e-13 78.6 211 29.4
CANSAT01G2928 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-12 77.8 218 28.9
CANSAT64G0736 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-12 77.8 218 28.9
CANSAT54G0599 Cannabis sativa HOM05D000017 ORTHO05D000013 1.8e-12 77.4 206 28.2
CANSAT01G1536 Cannabis sativa HOM05D000017 ORTHO05D000013 3.1e-12 76.6 206 28.2
CANSAT01G2730 Cannabis sativa HOM05D000017 ORTHO05D000013 3.1e-12 76.6 206 28.2
CANSAT78G2080 Cannabis sativa HOM05D000017 ORTHO05D000013 3.1e-12 76.6 206 28.2
CANSAT64G0496 Cannabis sativa HOM05D000017 ORTHO05D000013 4.1e-12 76.3 220 26.8
CANSAT56G0674 Cannabis sativa HOM05D000017 ORTHO05D000013 3.4e-11 73.2 207 27.5
CANSAT35G1872 Cannabis sativa HOM05D000017 ORTHO05D000013 4.5e-11 72.8 209 27.3
CANSAT11G2350 Cannabis sativa HOM05D000017 ORTHO05D000013 5.9e-11 72.4 203 29.1
CANSAT25G1145 Cannabis sativa HOM05D000017 ORTHO05D000013 7.7e-11 72.0 207 26.6
CANSAT35G1787 Cannabis sativa HOM05D000017 ORTHO05D000013 7.7e-11 72.0 206 26.7
CANSAT01G0945 Cannabis sativa HOM05D000017 ORTHO05D000013 1.0e-10 71.6 207 27.1
CANSAT56G4317 Cannabis sativa HOM05D000017 ORTHO05D000013 1.7e-10 70.9 206 26.7
CANSAT80G0068 Cannabis sativa HOM05D000017 ORTHO05D000013 1.7e-10 70.9 78 43.6
CANSAT01G1843 Cannabis sativa HOM05D000017 ORTHO05D000013 2.9e-10 70.1 220 25.9
CANSAT01G0559 Cannabis sativa HOM05D000017 ORTHO05D000013 5.0e-10 69.3 81 42.0
CANSAT35G1652 Cannabis sativa HOM05D000017 ORTHO05D000013 8.5e-10 68.6 203 28.6
CANSAT54G0405 Cannabis sativa HOM05D000017 ORTHO05D000013 8.5e-10 68.6 78 43.6
CANSAT56G1010 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-09 68.2 80 42.5
CANSAT25G1496 Cannabis sativa HOM05D000017 ORTHO05D000013 1.9e-09 67.4 78 42.3
CANSAT54G1422 Cannabis sativa HOM05D000017 ORTHO05D000013 1.9e-09 67.4 80 42.5
CANSAT78G2065 Cannabis sativa HOM05D000017 ORTHO05D000013 1.9e-09 67.4 214 25.7
CANSAT64G0409 Cannabis sativa HOM05D000017 ORTHO05D000013 2.5e-09 67.0 80 42.5
CANSAT54G0555 Cannabis sativa HOM05D000017 ORTHO05D000013 3.2e-09 66.6 221 25.3
CANSAT54G1083 Cannabis sativa HOM05D000017 ORTHO05D000013 4.2e-09 66.2 60 51.7
CANSAT64G2311 Cannabis sativa HOM05D000017 ORTHO05D000013 5.5e-09 65.9 74 41.9
CANSAT21G0539 Cannabis sativa HOM05D000017 ORTHO05D000013 7.2e-09 65.5 163 31.3
CANSAT01G1372 Cannabis sativa HOM05D000017 ORTHO05D000013 9.4e-09 65.1 80 40.0
CANSAT01G2588 Cannabis sativa HOM05D000017 ORTHO05D000013 9.4e-09 65.1 80 40.0
CANSAT25G1804 Cannabis sativa HOM05D000017 ORTHO05D000013 9.4e-09 65.1 80 40.0
CANSAT54G0096 Cannabis sativa HOM05D000017 ORTHO05D000013 9.4e-09 65.1 80 40.0
CANSAT56G0518 Cannabis sativa HOM05D000017 ORTHO05D000013 9.4e-09 65.1 80 40.0
CANSAT78G0359 Cannabis sativa HOM05D000017 ORTHO05D000013 9.4e-09 65.1 80 40.0
CANSAT80G2093 Cannabis sativa HOM05D000017 ORTHO05D000013 9.4e-09 65.1 80 40.0
CANSAT01G0792 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-08 64.7 79 38.0
CANSAT21G0206 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-08 64.7 80 40.0
CANSAT78G1719 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-08 64.7 80 40.0
CANSAT80G0838 Cannabis sativa HOM05D000017 ORTHO05D000013 1.2e-08 64.7 80 40.0
CANSAT35G1887 Cannabis sativa HOM05D000017 ORTHO05D000013 1.6e-08 64.3 74 40.5
TWI77G0635 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.6e-08 64.3 150 32.0
CANSAT56G3267 Cannabis sativa HOM05D000017 ORTHO05D000013 2.1e-08 63.9 208 26.4
CANSAT64G1246 Cannabis sativa HOM05D000017 ORTHO05D000013 2.1e-08 63.9 80 40.0
CANSAT01G2148 Cannabis sativa HOM05D000017 ORTHO05D000013 3.6e-08 63.2 158 28.5
CANSAT78G0314 Cannabis sativa HOM05D000017 ORTHO05D000013 3.6e-08 63.2 78 39.7
CANSAT78G0358 Cannabis sativa HOM05D000017 ORTHO05D000013 3.6e-08 63.2 196 28.6
CANSAT25G2090 Cannabis sativa HOM05D000017 ORTHO05D000013 4.7e-08 62.8 96 35.4
CANSAT78G1617 Cannabis sativa HOM05D000017 ORTHO05D000013 4.7e-08 62.8 80 40.0
CANSAT25G1793 Cannabis sativa HOM05D000017 ORTHO05D000013 6.1e-08 62.4 80 36.2
Sopen05g015880 Solanum pennellii HOM05D000017 ORTHO05D000013 6.1e-08 62.4 214 27.6
Sopen12g022630 Solanum pennellii HOM05D000017 ORTHO05D000013 6.1e-08 62.4 214 27.6
Peaxi162Scf00020g01812 Petunia axillaris HOM05D000017 ORTHO05D000013 7.9e-08 62.0 119 29.4
CANSAT78G1192 Cannabis sativa HOM05D000017 ORTHO05D000013 1.0e-07 61.6 72 41.7
CANSAT54G0823 Cannabis sativa HOM05D000017 ORTHO05D000013 1.4e-07 61.2 79 39.2
Nitab4.5_0001115g0040 Nicotiana tabacum HOM05D000017 ORTHO05D000013 3.0e-07 60.1 184 24.5
Atru.chr6.1119 Acer truncatum HOM05D000017 ORTHO05D000013 3.9e-07 59.7 173 30.1
CANSAT21G2462 Cannabis sativa HOM05D000017 ORTHO05D000013 3.9e-07 59.7 81 37.0
CANSAT54G0189 Cannabis sativa HOM05D000017 ORTHO05D000013 3.9e-07 59.7 80 36.2
CANSAT25G3531 Cannabis sativa HOM05D000017 ORTHO05D000013 8.8e-07 58.5 81 38.3
CANSAT56G3678 Cannabis sativa HOM05D000017 ORTHO05D000013 8.8e-07 58.5 80 33.8
Nitab4.5_0006458g0040 Nicotiana tabacum HOM05D007248 ORTHO05D000013 8.8e-07 58.5 70 45.7
Nitab4.5_0010583g0020 Nicotiana tabacum HOM05D000017 ORTHO05D000013 8.8e-07 58.5 67 47.8
CANSAT56G3614 Cannabis sativa HOM05D000017 ORTHO05D000013 1.1e-06 58.2 80 37.5
Nitab4.5_0000379g0020 Nicotiana tabacum HOM05D007248 ORTHO05D000013 1.1e-06 58.2 70 47.1
Sopen06g011940 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-06 58.2 214 27.1
SGA_v2.0_scaffold220G42614 Striga asiatica HOM05D000017 ORTHO05D000013 1.1e-06 58.2 73 41.1
CANSAT01G2376 Cannabis sativa HOM05D000017 ORTHO05D000013 1.5e-06 57.8 98 36.7
CANSAT11G2629 Cannabis sativa HOM05D000017 ORTHO05D000013 1.5e-06 57.8 59 47.5
CANSAT80G1581 Cannabis sativa HOM05D000017 ORTHO05D000013 1.5e-06 57.8 98 36.7
ATR0365G001 Amborella trichopoda HOM05D000017 ORTHO05D000013 2.0e-06 57.4 81 37.0
CANSAT01G0280 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-06 57.4 81 37.0
CANSAT21G0023 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-06 57.4 81 37.0
CANSAT21G1653 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-06 57.4 81 35.8
CANSAT35G1556 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-06 57.4 81 35.8
CANSAT54G0260 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-06 57.4 81 35.8
CANSAT54G2395 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-06 57.4 81 35.8
CANSAT56G2425 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-06 57.4 81 37.0
CANSAT78G0699 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-06 57.4 81 35.8
CANSAT78G1679 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-06 57.4 81 38.3
CANSAT78G2414 Cannabis sativa HOM05D000017 ORTHO05D000013 2.0e-06 57.4 81 35.8
Nitab4.5_0002352g0130 Nicotiana tabacum HOM05D000017 ORTHO05D000013 2.6e-06 57.0 214 25.2
Atru.chr12.1233 Acer truncatum HOM05D000017 ORTHO05D000013 3.3e-06 56.6 226 25.2
Atru.chr7.75 Acer truncatum HOM05D000017 ORTHO05D000013 3.3e-06 56.6 210 27.6
ATR0727G001 Amborella trichopoda HOM05D000017 ORTHO05D000013 3.3e-06 56.6 81 35.8
CANSAT11G1736 Cannabis sativa HOM05D000017 ORTHO05D000013 3.3e-06 56.6 72 38.9
CANSAT56G0999 Cannabis sativa HOM05D000017 ORTHO05D000013 3.3e-06 56.6 81 35.8
CANSAT78G1370 Cannabis sativa HOM05D000017 ORTHO05D000013 3.3e-06 56.6 98 36.7
CANSAT78G2408 Cannabis sativa HOM05D000017 ORTHO05D000013 3.3e-06 56.6 210 23.8
Nitab4.5_0027109g0010 Nicotiana tabacum HOM05D007248 ORTHO05D000013 3.3e-06 56.6 70 44.3
Peaxi162Scf00069g01615 Petunia axillaris HOM05D000017 ORTHO05D000013 3.3e-06 56.6 47 55.3
Peaxi162Scf03709g00003 Petunia axillaris HOM05D000017 ORTHO05D000013 3.3e-06 56.6 47 53.2
CANSAT64G1909 Cannabis sativa HOM05D000017 ORTHO05D000013 4.4e-06 56.2 78 34.6
CANSAT78G0791 Cannabis sativa HOM05D000017 ORTHO05D000013 4.4e-06 56.2 59 45.8
CANSAT78G2091 Cannabis sativa HOM05D000017 ORTHO05D000013 4.4e-06 56.2 58 44.8
Nitab4.5_0012303g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.4e-06 56.2 78 41.0
Atru.chr6.42 Acer truncatum HOM05D000017 ORTHO05D000013 5.7e-06 55.8 209 27.8
CSS0015918 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 5.7e-06 55.8 153 28.1
CANSAT64G1445 Cannabis sativa HOM05D000017 ORTHO05D000013 5.7e-06 55.8 78 33.3
CANSAT54G1988 Cannabis sativa HOM05D000017 ORTHO05D000013 9.7e-06 55.1 81 35.8
CANSAT78G2460 Cannabis sativa HOM05D000017 ORTHO05D000013 9.7e-06 55.1 81 33.3


User provided reference genes

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