Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold158G37451 Striga asiatica HOM05D007515 ORTHO05D009374 5.6e-58 227.6 135 100.0
SGA_v2.0_scaffold158G37447 Striga asiatica HOM05D007515 ORTHO05D009374 2.3e-51 205.7 135 91.1
SGA_v2.0_scaffold49G18111 Striga asiatica HOM05D007515 ORTHO05D009374 1.9e-37 159.5 121 75.2
MSTRG.23581 Avicennia marina HOM05D007515 ORTHO05D009374 5.4e-21 104.8 148 50.0
Nitab4.5_0000912g0070 Nicotiana tabacum HOM05D007515 ORTHO05D009374 3.5e-12 75.5 149 38.3
Migut.H00225 Erythranthe guttata HOM05D007515 ORTHO05D009374 4.6e-12 75.1 127 40.2
Peaxi162Scf00394g00816 Petunia axillaris HOM05D007515 ORTHO05D009374 5.1e-11 71.6 136 46.3
Nitab4.5_0007990g0020 Nicotiana tabacum HOM05D007515 ORTHO05D009374 1.9e-10 69.7 136 38.2
Solyc02g086170.3 Solanum lycopersicum HOM05D007515 ORTHO05D009374 9.6e-10 67.4 135 36.3
Sopen02g030860 Solanum pennellii HOM05D007515 ORTHO05D009374 2.1e-09 66.2 135 35.6
PGSC0003DMG400026389 Solanum tuberosum HOM05D007515 ORTHO05D009374 2.1e-09 66.2 138 34.8
Actinidia15892 Actinidia chinensis HOM05D007515 ORTHO05D009374 2.8e-09 65.9 129 40.3
Nn4g23909 Nelumbo nucifera HOM05D007515 ORTHO05D009374 1.1e-08 63.9 139 36.7
Atru.chr1.1654 Acer truncatum HOM05D007515 ORTHO05D009374 1.4e-08 63.5 143 37.1
Rhsim08G0082900 Rhododendron simsii HOM05D007515 ORTHO05D009374 1.4e-08 63.5 147 38.1
ECA238G4180 Erigeron canadensis HOM05D007515 ORTHO05D009374 1.8e-08 63.2 140 34.3
Hma1.2p1_0075F.1_g039300 Hydrangea macrophylla HOM05D007515 ORTHO05D009374 1.8e-08 63.2 125 45.6
unitig_736.g22559 Utricularia gibba HOM05D007515 ORTHO05D009374 3.1e-08 62.4 136 38.2
FvH4_4g18360 Fragaria vesca HOM05D007515 ORTHO05D009374 4.0e-08 62.0 142 33.1
SGA_v2.0_scaffold158G37444 Striga asiatica HOM05D007515 ORTHO05D009374 4.0e-08 62.0 46 80.4
Manes.02G070000 Manihot esculenta HOM05D007515 ORTHO05D009374 5.3e-08 61.6 137 32.8
Haze_14170 Corylus avellana HOM05D007515 ORTHO05D009374 6.9e-08 61.2 128 47.7
RcHm_v2.0_Chr4g0422841 Rosa chinensis HOM05D007515 ORTHO05D009374 6.9e-08 61.2 146 34.9
Ciclev10013056m.g Citrus clementina HOM05D007515 ORTHO05D009374 9.0e-08 60.8 149 36.2
Glyma.13G044900 Glycine max HOM05D007515 ORTHO05D009374 9.0e-08 60.8 148 39.9
Aqoxy3G00240 Aquilegia oxysepala HOM05D007515 ORTHO05D009374 1.2e-07 60.5 142 33.8
Lsat_1_v5_gn_2_79341 Lactuca sativa HOM05D007515 ORTHO05D009374 1.2e-07 60.5 138 37.0
Rhsim09G0050100 Rhododendron simsii HOM05D007515 ORTHO05D009374 1.2e-07 60.5 146 38.4
SalBow3G4303 Salvia bowleyana HOM05D007515 ORTHO05D009374 1.5e-07 60.1 132 40.9
Eucgr.J01508 Eucalyptus grandis HOM05D007515 ORTHO05D009374 2.0e-07 59.7 137 39.4
CiPaw.03G063100 Carya illinoinensis HOM05D007515 ORTHO05D009374 2.6e-07 59.3 129 34.1
QL12p016476 Quercus lobata HOM05D007515 ORTHO05D009374 3.4e-07 58.9 158 32.3
PGR042G1312 Punica granatum HOM05D007515 ORTHO05D009374 4.5e-07 58.5 150 36.0
Cc07_g08700 Coffea canephora HOM05D007515 ORTHO05D009374 7.6e-07 57.8 132 44.7
Gohir.A11G164100 Gossypium hirsutum HOM05D007515 ORTHO05D009374 1.0e-06 57.4 141 38.3
HanXRQChr14g0440481 Helianthus annuus HOM05D007515 ORTHO05D009374 1.0e-06 57.4 138 35.5
QL02p050960 Quercus lobata HOM05D007515 ORTHO05D009374 1.0e-06 57.4 158 31.6
VMungo0464G1380 Vigna mungo HOM05D007515 ORTHO05D009374 1.3e-06 57.0 146 34.2
GSVIVG01031005001 Vitis vinifera HOM05D007515 ORTHO05D009374 1.3e-06 57.0 139 36.0
Duzib138G0915 Durio zibethinus HOM05D007515 ORTHO05D009374 1.7e-06 56.6 147 34.0
Gohir.D11G170400 Gossypium hirsutum HOM05D007515 ORTHO05D009374 1.7e-06 56.6 154 35.7
Gorai.007G182300 Gossypium raimondii HOM05D007515 ORTHO05D009374 1.7e-06 56.6 154 35.7
Potri.017G116500 Populus trichocarpa HOM05D007515 ORTHO05D009374 2.2e-06 56.2 140 33.6
Glyma.19G050400 Glycine max HOM05D007515 ORTHO05D009374 2.9e-06 55.8 145 38.6
Oeu039735.1 Olea europaea HOM05D007515 ORTHO05D009374 2.9e-06 55.8 113 38.1
Phvul.004G062000 Phaseolus vulgaris HOM05D007515 ORTHO05D009374 2.9e-06 55.8 139 31.7
HPP92_011524 Vanilla planifolia HOM05D007515 ORTHO05D009374 3.8e-06 55.5 109 34.9
THA.LOC104827160 Tarenaya hassleriana HOM05D007515 ORTHO05D009374 4.9e-06 55.1 143 35.0
Lj2g0024883 Lotus japonicus HOM05D007515 ORTHO05D009374 6.5e-06 54.7 140 37.9
MD09G1254600 Malus domestica HOM05D007515 ORTHO05D009374 6.5e-06 54.7 143 41.3
TPR.G32460 Trifolium pratense HOM05D007515 ORTHO05D009374 6.5e-06 54.7 139 41.0


User provided reference genes

Program Settings