Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold157G37418 Striga asiatica HOM05D004955 ORTHO05D005965 3.7e-274 947.6 475 100.0
SGA_v2.0_scaffold18G08384 Striga asiatica HOM05D004955 ORTHO05D005965 2.4e-188 662.5 428 80.6
SalBow6G1446 Salvia bowleyana HOM05D004955 ORTHO05D005965 3.6e-176 622.1 454 72.0
Migut.E00912 Erythranthe guttata HOM05D004955 ORTHO05D005965 3.0e-175 619.0 453 72.0
Migut.E00798 Erythranthe guttata HOM05D004955 ORTHO05D005965 5.2e-175 618.2 453 72.0
MSTRG.1970 Avicennia marina HOM05D004955 ORTHO05D005965 8.8e-175 617.5 449 72.2
GSVIVG01013229001 Vitis vinifera HOM05D004955 ORTHO05D005965 1.5e-158 563.5 455 65.9
Oeu039341.2 Olea europaea HOM05D004955 ORTHO05D005965 5.7e-158 561.6 480 63.8
Nitab4.5_0002055g0140 Nicotiana tabacum HOM05D004955 ORTHO05D005965 4.8e-157 558.5 454 66.1
Nitab4.5_0006693g0050 Nicotiana tabacum HOM05D004955 ORTHO05D005965 2.4e-156 556.2 449 67.0
Cpa.g.sc39.114 Carica papaya HOM05D004955 ORTHO05D005965 4.1e-156 555.4 458 63.8
Dinv28916 Davidia involucrata HOM05D004955 ORTHO05D005965 9.1e-156 554.3 454 63.9
GSVIVG01011242001 Vitis vinifera HOM05D004955 ORTHO05D005965 1.6e-155 553.5 455 64.4
DCAR_005602 Daucus carota HOM05D004955 ORTHO05D005965 2.0e-155 553.1 454 64.3
CSS0030337 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 2.7e-155 552.7 455 64.2
vmacro21668 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 5.9e-155 551.6 455 64.6
Nn1g00613 Nelumbo nucifera HOM05D004955 ORTHO05D005965 1.0e-154 550.8 455 63.5
Ciclev10031124m.g Citrus clementina HOM05D004955 ORTHO05D005965 1.7e-154 550.1 456 62.9
Cc05_g03300 Coffea canephora HOM05D004955 ORTHO05D005965 2.2e-154 549.7 454 63.7
CSS0027312 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 2.9e-154 549.3 455 64.0
Atru.BG.31.p Acer truncatum HOM05D004955 ORTHO05D005965 1.5e-153 547.0 456 62.7
Potri.001G146900 Populus trichocarpa HOM05D004955 ORTHO05D005965 3.2e-153 545.8 456 62.5
Rhsim09G0128800 Rhododendron simsii HOM05D004955 ORTHO05D005965 7.2e-153 544.7 454 64.8
CAN.G799.17 Capsicum annuum HOM05D004955 ORTHO05D005965 4.7e-152 542.0 454 64.1
Gohir.A01G044000 Gossypium hirsutum HOM05D004955 ORTHO05D005965 4.7e-152 542.0 456 62.3
Gorai.002G043000 Gossypium raimondii HOM05D004955 ORTHO05D005965 6.1e-152 541.6 456 62.5
Sopen08g025850 Solanum pennellii HOM05D004955 ORTHO05D005965 6.1e-152 541.6 454 64.1
Thecc.07G110200 Theobroma cacao HOM05D004955 ORTHO05D005965 6.1e-152 541.6 456 62.3
Manes.15G172800 Manihot esculenta HOM05D004955 ORTHO05D005965 8.0e-152 541.2 464 61.9
Solyc08g077270.4 Solanum lycopersicum HOM05D004955 ORTHO05D005965 1.0e-151 540.8 454 63.7
Duzib213G0438 Durio zibethinus HOM05D004955 ORTHO05D005965 2.3e-151 539.7 456 61.8
Peaxi162Scf00084g00922 Petunia axillaris HOM05D004955 ORTHO05D005965 2.3e-151 539.7 481 61.3
Prupe.5G046300 Prunus persica HOM05D004955 ORTHO05D005965 2.3e-151 539.7 456 62.3
Gohir.D01G034800 Gossypium hirsutum HOM05D004955 ORTHO05D005965 4.0e-151 538.9 456 62.1
COL.COLO4_17563 Corchorus olitorius HOM05D004955 ORTHO05D005965 6.8e-151 538.1 456 61.8
MD06G1040100 Malus domestica HOM05D004955 ORTHO05D005965 2.0e-150 536.6 458 61.8
Lj3A396G10 Lonicera japonica HOM05D004955 ORTHO05D005965 3.4e-150 535.8 468 61.5
RcHm_v2.0_Chr7g0208321 Rosa chinensis HOM05D004955 ORTHO05D005965 3.4e-150 535.8 456 62.1
Ca_24631_v3 Cicer arietinum L. HOM05D004955 ORTHO05D005965 9.8e-150 534.3 451 62.5
arahy.Tifrunner.gnm1.ann1.JVPY2N Arachis hypogaea HOM05D004955 ORTHO05D005965 1.3e-149 533.9 457 61.5
arahy.Tifrunner.gnm1.ann1.U6D9EY Arachis hypogaea HOM05D004955 ORTHO05D005965 1.3e-149 533.9 457 61.5
vmacro00352 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 1.7e-149 533.5 455 63.1
Sabra01G0115600 Salix brachista HOM05D004955 ORTHO05D005965 3.7e-149 532.3 456 61.2
Lj2g0012431 Lotus japonicus HOM05D004955 ORTHO05D005965 1.8e-148 530.0 457 61.5
CiPaw.12G060300 Carya illinoinensis HOM05D004955 ORTHO05D005965 3.1e-148 529.3 466 60.1
Medtr5g013970 Medicago truncatula HOM05D004955 ORTHO05D005965 3.1e-148 529.3 451 61.9
TAR375G0042 Trochodendron aralioides HOM05D004955 ORTHO05D005965 3.1e-148 529.3 456 62.5
Psat2g174720 Pisum sativum HOM05D004955 ORTHO05D005965 7.0e-148 528.1 457 60.6
PGR031G1993 Punica granatum HOM05D004955 ORTHO05D005965 7.0e-148 528.1 458 63.3
AUR62007230 Chenopodium quinoa HOM05D004955 ORTHO05D005965 9.2e-148 527.7 456 60.3
FAN18G2324 Fragaria x ananassa HOM05D004955 ORTHO05D005965 9.2e-148 527.7 452 61.9
AUR62018770 Chenopodium quinoa HOM05D004955 ORTHO05D005965 1.2e-147 527.3 455 60.7
FvH4_5g21180 Fragaria vesca HOM05D004955 ORTHO05D005965 1.2e-147 527.3 456 61.4
VMungo1215G2917 Vigna mungo HOM05D004955 ORTHO05D005965 5.9e-147 525.0 457 60.8
FAN08G3652 Fragaria x ananassa HOM05D004955 ORTHO05D005965 1.0e-146 524.2 450 62.2
QL12p007112 Quercus lobata HOM05D004955 ORTHO05D005965 1.7e-146 523.5 457 61.7
Sc07g0008830 Simmondsia chinensis HOM05D004955 ORTHO05D005965 1.7e-146 523.5 456 61.0
EL10Ac5g12196 Beta vulgaris HOM05D004955 ORTHO05D005965 3.8e-146 522.3 456 60.5
AUR62001104 Chenopodium quinoa HOM05D004955 ORTHO05D005965 5.0e-146 521.9 457 59.5
MBI04_g44837_MAGBIO Magnolia biondii HOM05D004955 ORTHO05D005965 8.6e-146 521.2 463 60.9
Phvul.002G003600 Phaseolus vulgaris HOM05D004955 ORTHO05D005965 1.1e-145 520.8 460 60.0
unitig_21.g20378 Utricularia gibba HOM05D004955 ORTHO05D005965 5.6e-145 518.5 453 62.5
PSO017G5366 Papaver somniferum HOM05D004955 ORTHO05D005965 7.3e-145 518.1 457 60.2
Eucgr.D02153 Eucalyptus grandis HOM05D004955 ORTHO05D005965 9.5e-145 517.7 456 61.8
Hund14430 Selenicereus undatus HOM05D004955 ORTHO05D005965 9.5e-145 517.7 467 59.5
FAN04G2254 Fragaria x ananassa HOM05D004955 ORTHO05D005965 1.2e-144 517.3 467 60.0
PSO063G1154 Papaver somniferum HOM05D004955 ORTHO05D005965 2.8e-144 516.2 456 59.4
TWI81G0724 Tripterygium wilfordii HOM05D004955 ORTHO05D005965 3.6e-144 515.8 457 60.8
Aqoxy3G03106 Aquilegia oxysepala HOM05D004955 ORTHO05D005965 1.0e-143 514.2 488 57.2
PGSC0003DMG400024224 Solanum tuberosum HOM05D004955 ORTHO05D005965 1.0e-143 514.2 429 64.6
Glyma.20G095000 Glycine max HOM05D004955 ORTHO05D005965 1.2e-142 510.8 458 59.8
FAN13G2236 Fragaria x ananassa HOM05D004955 ORTHO05D005965 2.6e-142 509.6 459 59.9
PSO541G5086 Papaver somniferum HOM05D004955 ORTHO05D005965 7.5e-142 508.1 456 59.2
Glyma.07G096600 Glycine max HOM05D004955 ORTHO05D005965 2.9e-141 506.1 459 59.0
Carub.0006s1636 Capsella rubella HOM05D004955 ORTHO05D005965 8.3e-141 504.6 466 58.6
HanXRQChr14g0455871 Helianthus annuus HOM05D004955 ORTHO05D005965 2.4e-140 503.1 456 60.3
Lalb_Chr16g0379231 Lupinus albus HOM05D004955 ORTHO05D005965 3.2e-140 502.7 432 61.8
MD16G1269200 Malus domestica HOM05D004955 ORTHO05D005965 1.2e-139 500.7 455 58.9
AL6G29260 Arabidopsis lyrata HOM05D004955 ORTHO05D005965 2.0e-139 500.0 465 58.1
CSS0006893 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 2.7e-139 499.6 430 62.1
AT5G18070 Arabidopsis thaliana HOM05D004955 ORTHO05D005965 1.1e-137 494.2 465 57.4
CsaV3_1G038770 Cucumis sativus L. HOM05D004955 ORTHO05D005965 1.9e-137 493.4 458 57.9
CARHR195050 Cardamine hirsuta HOM05D004955 ORTHO05D005965 2.1e-136 490.0 462 57.8
Aa31LG9G15390 Aethionema arabicum HOM05D004955 ORTHO05D005965 6.2e-136 488.4 463 56.8
C09p58920 Brassica napus HOM05D004955 ORTHO05D005965 2.3e-135 486.5 461 56.2
BraA10t44206Z Brassica rapa HOM05D004955 ORTHO05D005965 2.3e-135 486.5 461 56.8
ClCG03G017340 Citrullus lanatus HOM05D004955 ORTHO05D005965 4.0e-135 485.7 457 58.0
MELO3C015301.2 Cucumis melo HOM05D004955 ORTHO05D005965 8.9e-135 484.6 454 57.7
MBI04_g29834_MAGBIO Magnolia biondii HOM05D004955 ORTHO05D005965 8.9e-135 484.6 466 57.7
Sed0006321 Sechium edule HOM05D004955 ORTHO05D005965 8.9e-135 484.6 459 57.3
ATR0829G014 Amborella trichopoda HOM05D004955 ORTHO05D005965 1.3e-133 480.7 459 55.8
CANSAT80G1132 Cannabis sativa HOM05D004955 ORTHO05D005965 3.7e-133 479.2 477 56.2
Thhalv10013080m.g Eutrema salsugineum HOM05D004955 ORTHO05D005965 3.7e-133 479.2 468 55.8
BolC9t58736H Brassica oleracea HOM05D004955 ORTHO05D005965 4.9e-133 478.8 461 56.2
THA.LOC104814429 Tarenaya hassleriana HOM05D004955 ORTHO05D005965 4.9e-133 478.8 465 55.7
HPP92_017500 Vanilla planifolia HOM05D004955 ORTHO05D005965 4.9e-133 478.8 459 56.9
BcaC04g18728 Brassica carinata HOM05D004955 ORTHO05D005965 8.3e-133 478.0 461 55.7
ECA233G2813 Erigeron canadensis HOM05D004955 ORTHO05D005965 1.9e-132 476.9 427 60.0
Sp6g26230 Schrenkiella parvula HOM05D004955 ORTHO05D005965 5.4e-132 475.3 467 55.9
A10p21440 Brassica napus HOM05D004955 ORTHO05D005965 2.0e-131 473.4 461 54.9
Lsat_1_v5_gn_6_66461 Lactuca sativa HOM05D004955 ORTHO05D005965 2.0e-131 473.4 460 57.4
Zm00001eb119880 Zea mays HOM05D004955 ORTHO05D005965 1.5e-129 467.2 459 54.2
Os07g0195400 Oryza sativa ssp. japonica HOM05D004955 ORTHO05D005965 3.3e-129 466.1 458 52.4
C03p10070 Brassica napus HOM05D004955 ORTHO05D005965 2.8e-128 463.0 460 54.8
BraA03t10187Z Brassica rapa HOM05D004955 ORTHO05D005965 1.4e-127 460.7 460 54.6
BcaB01g05173 Brassica carinata HOM05D004955 ORTHO05D005965 5.2e-127 458.8 461 54.0
BolC3t13493H Brassica oleracea HOM05D004955 ORTHO05D005965 5.2e-127 458.8 461 54.0
A03p08630 Brassica napus HOM05D004955 ORTHO05D005965 8.9e-127 458.0 459 54.7
Actinidia25945 Actinidia chinensis HOM05D004955 ORTHO05D005965 5.8e-126 455.3 455 56.9
Haze_07894 Corylus avellana HOM05D004955 ORTHO05D005965 1.6e-123 447.2 457 54.9
SEGI_00537 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 5.2e-119 432.2 457 51.6
CDE08G0647 Ceratophyllum demersum HOM05D004955 ORTHO05D005965 2.5e-113 413.3 378 56.3
Pp3c15_140 Physcomitrium patens HOM05D004955 ORTHO05D005965 2.9e-109 399.8 473 47.4
SHI01417 Sapria himalayana HOM05D004955 ORTHO05D005965 1.9e-108 397.1 380 56.6
Haze_08299 Corylus avellana HOM05D004955 ORTHO05D005965 4.2e-108 396.0 387 56.3
BcaB08g36711 Brassica carinata HOM05D004955 ORTHO05D005965 1.2e-107 394.4 454 49.8
Haze_08303 Corylus avellana HOM05D004955 ORTHO05D005965 6.2e-104 382.1 352 58.2
CBR_g36832 Chara braunii HOM05D004955 ORTHO05D005965 1.7e-101 374.0 485 45.4
SMO174G0171 Selaginella moellendorffii HOM05D004955 ORTHO05D005965 3.8e-101 372.9 451 47.5
Dinv25184 Davidia involucrata HOM05D004955 ORTHO05D005965 3.5e-99 366.3 326 61.3
AagrBONN_evm.TU.Sc2ySwM_362.507 Anthoceros agrestis HOM05D004955 ORTHO05D005965 6.0e-99 365.5 465 45.6
Mapoly0074s0077 Marchantia polymorpha HOM05D004955 ORTHO05D005965 4.8e-96 355.9 460 46.1
Atru.chr6.1775 Acer truncatum HOM05D004955 ORTHO05D005965 3.1e-95 353.2 284 65.1
Haze_08304 Corylus avellana HOM05D004955 ORTHO05D005965 1.1e-81 308.1 268 60.1
Nn3g19414 Nelumbo nucifera HOM05D004955 ORTHO05D005965 1.1e-73 281.6 249 58.6
PRCOL_00000375 Prasinoderma coloniale HOM05D004955 ORTHO05D005965 2.5e-73 280.4 449 42.3
Glyma.16G093333 Glycine max HOM05D004955 ORTHO05D005965 1.2e-70 271.6 233 63.5
Glyma.01G201400 Glycine max HOM05D004955 ORTHO05D005965 5.0e-69 266.2 226 62.8
MCO08G085 Micromonas commoda HOM05D004955 ORTHO05D005965 2.1e-67 260.8 487 36.8
Cre08.g379700 Chlamydomonas reinhardtii HOM05D004955 ORTHO05D005965 1.4e-66 258.1 482 37.1
TPR.G6765 Trifolium pratense HOM05D004955 ORTHO05D005965 4.4e-49 199.9 444 34.7
MD09G1284100 Malus domestica HOM05D004955 ORTHO05D005965 4.2e-36 156.8 340 35.6
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 3.1e-31 140.6 425 29.9
SEGI_27182 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 3.5e-30 137.1 285 31.6
Haze_26496 Corylus avellana HOM05D004955 ORTHO05D005965 3.3e-28 130.6 214 39.3
Glyma.16G093267 Glycine max HOM05D004955 ORTHO05D005965 2.3e-26 124.4 110 60.0
BcaB01g01790 Brassica carinata HOM05D004955 ORTHO05D005965 1.1e-23 115.5 116 52.6
Glyma.01G201300 Glycine max HOM05D004955 ORTHO05D005965 1.7e-21 108.2 100 58.0
Cc05_g03290 Coffea canephora HOM05D004955 ORTHO05D005965 4.7e-19 100.1 78 62.8
CARHR185470 Cardamine hirsuta HOM05D004955 ORTHO05D005965 1.4e-18 98.6 87 58.6
SEGI_19301 Sequoiadendron giganteum HOM05D005396 ORTHO05D006400 1.2e-17 95.5 188 36.2
vmacro21667 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 1.7e-16 91.7 76 63.2
Haze_08302 Corylus avellana HOM05D004955 ORTHO05D005965 2.9e-16 90.9 93 55.9
SHI01420 Sapria himalayana HOM05D004955 ORTHO05D000023 4.6e-14 83.6 63 61.9
Haze_08300 Corylus avellana HOM05D004955 ORTHO05D005965 1.7e-13 81.6 85 55.3
Glyma.16G093100 Glycine max HOM05D004955 ORTHO05D005965 2.3e-13 81.3 78 50.0
ATR0149G020 Amborella trichopoda HOM05D004955 ORTHO05D005965 2.5e-12 77.8 88 52.3
Ah.04g153990 Amaranthus hybridus HOM05D004955 ORTHO05D005965 7.3e-12 76.3 208 31.2
SEGI_05540 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 8.9e-10 69.3 78 44.9


User provided reference genes

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