Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold157G37356 Striga asiatica HOM05D005950 ORTHO05D008673 1.6e-155 552.7 280 100.0
MSTRG.8054 Avicennia marina HOM05D005950 ORTHO05D008673 1.9e-108 396.4 282 74.5
Migut.K01055 Erythranthe guttata HOM05D005950 ORTHO05D008673 2.1e-107 392.9 279 75.3
SalBow2G0445 Salvia bowleyana HOM05D005950 ORTHO05D008673 2.3e-106 389.4 284 72.9
Peaxi162Scf00023g00931 Petunia axillaris HOM05D005950 ORTHO05D008673 1.3e-96 357.1 275 67.3
QL03p049137 Quercus lobata HOM05D005950 ORTHO05D008673 3.4e-94 349.0 268 67.2
Nitab4.5_0006153g0020 Nicotiana tabacum HOM05D005950 ORTHO05D008673 2.9e-93 345.9 240 71.7
Oeu027106.1 Olea europaea HOM05D005950 ORTHO05D008673 3.8e-93 345.5 248 70.6
CiPaw.05G101200 Carya illinoinensis HOM05D005950 ORTHO05D008673 5.0e-93 345.1 263 67.3
Cc11_g15000 Coffea canephora HOM05D005950 ORTHO05D008673 5.0e-93 345.1 259 69.5
MELO3C022359.2 Cucumis melo HOM05D005950 ORTHO05D008673 6.5e-93 344.7 260 69.2
Dinv03756 Davidia involucrata HOM05D005950 ORTHO05D008673 1.1e-92 344.0 239 70.7
FAN07G2488 Fragaria x ananassa HOM05D005950 ORTHO05D008673 1.1e-92 344.0 284 65.5
CSS0041196 Camellia sinensis var. sinensis HOM05D005950 ORTHO05D008673 2.5e-92 342.8 267 65.2
GSVIVG01001090001 Vitis vinifera HOM05D005950 ORTHO05D008673 2.5e-92 342.8 257 66.9
CSS0009236 Camellia sinensis var. sinensis HOM05D005950 ORTHO05D008673 3.2e-92 342.4 267 65.2
Nitab4.5_0000208g0380 Nicotiana tabacum HOM05D005950 ORTHO05D008673 3.2e-92 342.4 240 71.7
unitig_747.g21110 Utricularia gibba HOM05D005950 ORTHO05D008673 5.5e-92 341.7 264 66.7
CAN.G624.24 Capsicum annuum HOM05D005950 ORTHO05D008673 9.4e-92 340.9 273 64.1
TAR629G3081 Trochodendron aralioides HOM05D005950 ORTHO05D008673 9.4e-92 340.9 257 67.3
CsaV3_6G007730 Cucumis sativus L. HOM05D005950 ORTHO05D008673 1.2e-91 340.5 246 69.9
FAN12G2095 Fragaria x ananassa HOM05D005950 ORTHO05D008673 1.2e-91 340.5 266 67.3
Manes.08G101200 Manihot esculenta HOM05D005950 ORTHO05D008673 1.2e-91 340.5 247 69.2
FvH4_4g22640 Fragaria vesca HOM05D005950 ORTHO05D008673 1.6e-91 340.1 269 66.5
Sed0005763 Sechium edule HOM05D005950 ORTHO05D008673 2.1e-91 339.7 250 70.0
RhsimUnG0153300 Rhododendron simsii HOM05D005950 ORTHO05D008673 2.7e-91 339.3 255 67.5
Ciclev10005525m.g Citrus clementina HOM05D005950 ORTHO05D008673 3.6e-91 339.0 244 68.4
Rhsim12G0072500 Rhododendron simsii HOM05D005950 ORTHO05D008673 3.6e-91 339.0 255 67.5
Lsat_1_v5_gn_3_32320 Lactuca sativa HOM05D005950 ORTHO05D008673 6.1e-91 338.2 244 68.0
Eucgr.B03560 Eucalyptus grandis HOM05D005950 ORTHO05D008673 7.9e-91 337.8 271 64.6
MD13G1130900 Malus domestica HOM05D005950 ORTHO05D008673 1.0e-90 337.4 293 59.7
FAN17G1731 Fragaria x ananassa HOM05D005950 ORTHO05D008673 1.4e-90 337.0 271 66.1
CARHR027610 Cardamine hirsuta HOM05D005950 ORTHO05D008673 3.9e-90 335.5 277 65.3
Thhalv10008446m.g Eutrema salsugineum HOM05D005950 ORTHO05D008673 5.1e-90 335.1 259 68.3
Ah.03g135560 Amaranthus hybridus HOM05D005950 ORTHO05D008673 6.7e-90 334.7 246 69.1
Haze_12503 Corylus avellana HOM05D005950 ORTHO05D008673 6.7e-90 334.7 238 68.1
RcHm_v2.0_Chr4g0428871 Rosa chinensis HOM05D005950 ORTHO05D008673 6.7e-90 334.7 279 64.2
Solyc05g012700.3 Solanum lycopersicum HOM05D005950 ORTHO05D008673 6.7e-90 334.7 245 67.3
TAR371G0811 Trochodendron aralioides HOM05D005950 ORTHO05D008673 6.7e-90 334.7 284 63.7
Prupe.1G214800 Prunus persica HOM05D005950 ORTHO05D008673 8.8e-90 334.3 272 63.6
TWI36G0089 Tripterygium wilfordii HOM05D005950 ORTHO05D008673 1.1e-89 334.0 241 69.3
Gohir.A01G020600 Gossypium hirsutum HOM05D005950 ORTHO05D008673 1.5e-89 333.6 291 60.1
PGR102G2360 Punica granatum HOM05D005950 ORTHO05D008673 1.5e-89 333.6 257 68.1
Sopen05g007530 Solanum pennellii HOM05D005950 ORTHO05D008673 1.5e-89 333.6 245 66.9
Gorai.002G021400 Gossypium raimondii HOM05D005950 ORTHO05D008673 2.0e-89 333.2 291 60.1
Potri.001G100300 Populus trichocarpa HOM05D005950 ORTHO05D008673 2.0e-89 333.2 241 68.5
PGSC0003DMG400028387 Solanum tuberosum HOM05D005950 ORTHO05D008673 2.5e-89 332.8 245 66.9
Atru.chr12.1419 Acer truncatum HOM05D005950 ORTHO05D008673 3.3e-89 332.4 241 68.9
AUR62005715 Chenopodium quinoa HOM05D005950 ORTHO05D008673 4.3e-89 332.0 244 68.9
Hma1.2p1_0660F.1_g197630 Hydrangea macrophylla HOM05D005950 ORTHO05D008673 4.3e-89 332.0 236 71.2
MBI10_g32324_MAGBIO Magnolia biondii HOM05D005950 ORTHO05D008673 9.7e-89 330.9 280 61.8
THA.LOC104820536 Tarenaya hassleriana HOM05D005950 ORTHO05D008673 9.7e-89 330.9 278 63.3
BolC5t31407H Brassica oleracea HOM05D005950 ORTHO05D008673 1.3e-88 330.5 248 69.8
Duzib248G1270 Durio zibethinus HOM05D005950 ORTHO05D008673 1.7e-88 330.1 248 65.7
Aa31sc45G70 Aethionema arabicum HOM05D005950 ORTHO05D008673 2.2e-88 329.7 278 64.4
EL10Ac6g13611 Beta vulgaris HOM05D005950 ORTHO05D008673 2.8e-88 329.3 243 68.7
BcaB07g32425 Brassica carinata HOM05D005950 ORTHO05D008673 2.8e-88 329.3 278 64.4
Hund27394 Selenicereus undatus HOM05D005950 ORTHO05D008673 2.8e-88 329.3 249 66.7
Aqoxy5G03108 Aquilegia oxysepala HOM05D005950 ORTHO05D008673 6.3e-88 328.2 247 67.2
AT1G28140 Arabidopsis thaliana HOM05D005950 ORTHO05D008673 6.3e-88 328.2 233 71.2
BcaC05g26819 Brassica carinata HOM05D005950 ORTHO05D008673 6.3e-88 328.2 282 64.2
Carub.0001s2657 Capsella rubella HOM05D005950 ORTHO05D008673 8.2e-88 327.8 243 69.1
TPR.G7754 Trifolium pratense HOM05D005950 ORTHO05D008673 1.1e-87 327.4 249 65.9
AL1G41670 Arabidopsis lyrata HOM05D005950 ORTHO05D008673 1.4e-87 327.0 276 65.2
CANSAT01G2759 Cannabis sativa HOM05D005950 ORTHO05D008673 1.4e-87 327.0 267 65.2
Thecc.02G192100 Theobroma cacao HOM05D005950 ORTHO05D008673 1.4e-87 327.0 285 61.4
Lalb_Chr06g0164721 Lupinus albus HOM05D005950 ORTHO05D008673 2.4e-87 326.2 247 66.4
Sc19g0003090 Simmondsia chinensis HOM05D005950 ORTHO05D008673 2.4e-87 326.2 253 64.8
COL.COLO4_36001 Corchorus olitorius HOM05D005950 ORTHO05D008673 4.1e-87 325.5 290 61.4
Sp1g24330 Schrenkiella parvula HOM05D005950 ORTHO05D008673 5.3e-87 325.1 259 64.9
C05p26890 Brassica napus HOM05D005950 ORTHO05D008673 5.9e-86 321.6 284 63.0
BraA09t39303Z Brassica rapa HOM05D005950 ORTHO05D008673 7.7e-86 321.2 284 63.4
Medtr1g099520 Medicago truncatula HOM05D005950 ORTHO05D008673 1.0e-85 320.9 253 64.4
Actinidia33998 Actinidia chinensis HOM05D005950 ORTHO05D008673 2.9e-85 319.3 238 66.4
A09p37910 Brassica napus HOM05D005950 ORTHO05D008673 2.9e-85 319.3 284 63.0
DCAR_024633 Daucus carota HOM05D000512 ORTHO05D008673 6.5e-85 318.2 235 66.8
PSO478G4484 Papaver somniferum HOM05D005950 ORTHO05D008673 1.9e-84 316.6 292 59.6
Cpa.g.sc182.2 Carica papaya HOM05D005950 ORTHO05D008673 2.5e-84 316.2 244 66.4
PSO017G6070 Papaver somniferum HOM05D005950 ORTHO05D008673 2.5e-84 316.2 280 61.1
HanXRQChr06g0175111 Helianthus annuus HOM05D005950 ORTHO05D008673 4.2e-84 315.5 268 62.7
vmacro16072 Vaccinium macrocarpon HOM05D005950 ORTHO05D008673 4.2e-84 315.5 312 57.4
VMungo0720G2460 Vigna mungo HOM05D005950 ORTHO05D008673 9.4e-84 314.3 252 64.7
ATR0582G132 Amborella trichopoda HOM05D005950 ORTHO05D008673 2.1e-83 313.2 269 59.5
LjContig00470g0001843 Lotus japonicus HOM05D005950 ORTHO05D008673 4.7e-83 312.0 246 64.6
Phvul.007G000300 Phaseolus vulgaris HOM05D005950 ORTHO05D008673 1.0e-82 310.8 246 63.0
Os03g0850600 Oryza sativa ssp. japonica HOM05D005950 ORTHO05D008673 2.3e-82 309.7 223 69.1
Sabra01G0075200 Salix brachista HOM05D005950 ORTHO05D008673 8.8e-82 307.8 292 57.2
Zm00001eb064540 Zea mays HOM05D005950 ORTHO05D008673 1.1e-81 307.4 251 62.2
arahy.Tifrunner.gnm1.ann1.MTDN4F Arachis hypogaea HOM05D005950 ORTHO05D008673 2.0e-81 306.6 258 61.2
CDE02G3863 Ceratophyllum demersum HOM05D005950 ORTHO05D008673 3.3e-81 305.8 222 67.1
HPP92_007045 Vanilla planifolia HOM05D005950 ORTHO05D008673 1.7e-80 303.5 244 63.1
Pp3c8_12800 Physcomitrium patens HOM05D005950 ORTHO05D008673 2.9e-77 292.7 252 60.7
Psat6g195320 Pisum sativum HOM05D005950 ORTHO05D008673 4.2e-76 288.9 221 65.6
Lj3A1077T57 Lonicera japonica HOM05D005950 ORTHO05D008673 7.2e-76 288.1 198 73.7
AagrBONN_evm.TU.Sc2ySwM_344.2741 Anthoceros agrestis HOM05D005950 ORTHO05D008673 8.0e-75 284.6 261 58.2
ClCG06G001700 Citrullus lanatus HOM05D005950 ORTHO05D008673 1.4e-74 283.9 260 60.0
Ca_10708_v3 Cicer arietinum L. HOM05D005950 ORTHO05D008673 1.1e-73 280.8 215 65.1
SMO367G1143 Selaginella moellendorffii HOM05D005950 ORTHO05D008673 2.0e-73 280.0 254 57.5
Glyma.20G249800 Glycine max HOM05D005950 ORTHO05D008673 2.8e-72 276.2 212 65.1
Mapoly0027s0093 Marchantia polymorpha HOM05D005950 ORTHO05D008673 8.2e-72 274.6 244 57.4
Duzib052G0358 Durio zibethinus HOM05D005950 ORTHO05D008673 3.1e-71 272.7 238 61.3
SEGI_01129 Sequoiadendron giganteum HOM05D005950 ORTHO05D008673 4.1e-71 272.3 212 65.1
CBR_g3659 Chara braunii HOM05D005950 ORTHO05D008673 3.7e-64 249.2 238 54.2
AUR62028840 Chenopodium quinoa HOM05D005950 ORTHO05D008673 4.8e-64 248.8 205 63.9
arahy.Tifrunner.gnm1.ann1.PXY63F Arachis hypogaea HOM05D005950 ORTHO05D008673 3.5e-62 242.7 258 52.3
Hma1.2p1_0660F.1_g197620 Hydrangea macrophylla HOM05D005950 ORTHO05D008673 7.2e-60 235.0 177 68.4
Nn3g16271 Nelumbo nucifera HOM05D005950 ORTHO05D008673 1.0e-58 231.1 266 50.0
CDE06G2125 Ceratophyllum demersum HOM05D005950 ORTHO05D008673 8.8e-58 228.0 148 73.0
MCO02G210 Micromonas commoda HOM05D005950 ORTHO05D008673 2.7e-46 189.9 215 48.8
TWI18G1378 Tripterygium wilfordii HOM05D005950 ORTHO05D008673 1.5e-44 184.1 147 62.6
Cre04.g228450 Chlamydomonas reinhardtii HOM05D005950 ORTHO05D008673 9.8e-41 171.4 246 42.3
PRCOL_00003015 Prasinoderma coloniale HOM05D005950 ORTHO05D008673 1.6e-38 164.1 213 44.6
TPR.G36353 Trifolium pratense HOM05D005950 ORTHO05D008673 1.1e-31 141.4 88 75.0
Peaxi162Scf00040g00101 Petunia axillaris HOM05D005950 ORTHO05D008673 1.6e-30 137.5 136 54.4
Gohir.D01G019100 Gossypium hirsutum HOM05D005950 ORTHO05D008673 2.6e-25 120.2 154 48.1
Zm00001eb422050 Zea mays HOM05D005950 ORTHO05D008673 2.1e-19 100.5 76 64.5
Zm00001eb141620 Zea mays HOM05D005950 ORTHO05D444810 8.1e-19 98.6 68 66.2
Hma1.2p1_0660F.1_g197640 Hydrangea macrophylla HOM05D005950 ORTHO05D020170 4.0e-18 96.3 56 78.6
MD16G1141000 Malus domestica HOM05D005950 ORTHO05D020170 8.9e-18 95.1 69 66.7
FAN20G0916 Fragaria x ananassa HOM05D005950 ORTHO05D020170 9.9e-17 91.7 64 71.9
FAN25G3256 Fragaria x ananassa HOM05D005950 ORTHO05D203075 1.1e-15 88.2 109 47.7
Zm00001eb187530 Zea mays HOM05D006345 ORTHO05D007428 4.2e-15 86.3 63 63.5
Peaxi162Scf00003g00713 Petunia axillaris HOM05D005950 ORTHO05D305722 1.6e-14 84.3 136 43.4
AL1G56270 Arabidopsis lyrata HOM05D005950 ORTHO05D000283 1.0e-13 81.6 61 63.9
C05p26860 Brassica napus HOM05D005950 ORTHO05D020170 1.1e-12 78.2 52 69.2
Peaxi162Scf00968g00313 Petunia axillaris HOM05D005950 ORTHO05D305879 7.3e-12 75.5 109 41.3
BolC5t31405H Brassica oleracea HOM05D005950 ORTHO05D020170 2.8e-11 73.6 49 67.3
Peaxi162Scf00059g01815 Petunia axillaris HOM05D005950 ORTHO05D306406 4.8e-11 72.8 169 33.7
Glyma.10G298600 Glycine max HOM05D005950 ORTHO05D020170 1.1e-10 71.6 50 64.0
CDE06G1299 Ceratophyllum demersum HOM05D005950 ORTHO05D130736 1.8e-10 70.9 56 60.7
A09p37930 Brassica napus HOM05D005950 ORTHO05D020170 2.4e-10 70.5 53 62.3
Peaxi162Scf00141g00098 Petunia axillaris HOM05D005950 ORTHO05D306108 1.3e-08 64.7 43 72.1
AL4G33820 Arabidopsis lyrata HOM05D005950 ORTHO05D080589 7.9e-06 55.5 80 42.5


User provided reference genes

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