Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold157G37338 Striga asiatica HOM05D005560 ORTHO05D006862 5.6e-127 457.6 229 100.0
MSTRG.3846 Avicennia marina HOM05D005560 ORTHO05D006862 6.6e-43 178.3 122 74.6
SalBow8G4800 Salvia bowleyana HOM05D005560 ORTHO05D006862 4.3e-42 175.6 124 75.0
Migut.G00039 Erythranthe guttata HOM05D005560 ORTHO05D006862 5.2e-40 168.7 103 82.5
Dinv15139 Davidia involucrata HOM05D005560 ORTHO05D006862 2.2e-38 163.3 111 71.2
QL06p012974 Quercus lobata HOM05D005560 ORTHO05D006862 1.4e-37 160.6 111 70.3
Nn3g21792 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.9e-37 160.2 111 68.5
Peaxi162Scf00228g00733 Petunia axillaris HOM05D005560 ORTHO05D006862 1.9e-37 160.2 140 60.0
Dinv44258 Davidia involucrata HOM05D005560 ORTHO05D006862 3.2e-37 159.5 111 70.3
Prupe.1G113300 Prunus persica HOM05D005560 ORTHO05D006862 5.4e-37 158.7 111 69.4
TAR371G1140 Trochodendron aralioides HOM05D005560 ORTHO05D006862 5.4e-37 158.7 111 69.4
Lj6E694T0 Lonicera japonica HOM05D005560 ORTHO05D006862 7.0e-37 158.3 118 66.1
Oeu048287.1 Olea europaea HOM05D005560 ORTHO05D006862 7.0e-37 158.3 100 76.0
unitig_37.g12416 Utricularia gibba HOM05D005560 ORTHO05D007484 9.2e-37 157.9 96 82.3
Cc06_g13180 Coffea canephora HOM05D005560 ORTHO05D006862 1.2e-36 157.5 117 65.8
CSS0010593 Camellia sinensis var. sinensis HOM05D005560 ORTHO05D006862 3.5e-36 156.0 111 69.4
vmacro09713 Vaccinium macrocarpon HOM05D005560 ORTHO05D006862 3.5e-36 156.0 126 65.9
Ca_00962_v3 Cicer arietinum L. HOM05D005560 ORTHO05D006862 1.3e-35 154.1 111 66.7
Migut.O00585 Erythranthe guttata HOM05D005560 ORTHO05D006862 1.3e-35 154.1 100 79.0
Nitab4.5_0012592g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 1.7e-35 153.7 111 66.7
Potri.008G102200 Populus trichocarpa HOM05D005560 ORTHO05D006862 2.3e-35 153.3 106 69.8
arahy.Tifrunner.gnm1.ann1.JWH7Q7 Arachis hypogaea HOM05D005560 ORTHO05D006862 3.0e-35 152.9 111 66.7
TPR.G33875 Trifolium pratense HOM05D005560 ORTHO05D006862 3.0e-35 152.9 111 66.7
FAN07G2916 Fragaria x ananassa HOM05D005560 ORTHO05D006862 3.9e-35 152.5 111 68.5
Medtr2g033590 Medicago truncatula HOM05D005560 ORTHO05D006862 3.9e-35 152.5 111 67.6
Solyc01g058280.4 Solanum lycopersicum HOM05D005560 ORTHO05D006862 3.9e-35 152.5 111 66.7
CAN.G938.2 Capsicum annuum HOM05D005560 ORTHO05D006862 5.0e-35 152.1 111 67.6
Medtr2g097970 Medicago truncatula HOM05D005560 ORTHO05D006862 5.0e-35 152.1 111 66.7
PGSC0003DMG401029058 Solanum tuberosum HOM05D005560 ORTHO05D006862 5.0e-35 152.1 111 67.6
Manes.11G109500 Manihot esculenta HOM05D005560 ORTHO05D006862 6.6e-35 151.8 108 66.7
COL.COLO4_34571 Corchorus olitorius HOM05D005560 ORTHO05D006862 8.6e-35 151.4 111 66.7
FAN12G4019 Fragaria x ananassa HOM05D005560 ORTHO05D006862 8.6e-35 151.4 112 67.0
TPR.G30159 Trifolium pratense HOM05D005560 ORTHO05D006862 8.6e-35 151.4 111 65.8
Glyma.15G138200 Glycine max HOM05D005560 ORTHO05D006862 1.1e-34 151.0 111 65.8
MD16G1149600 Malus domestica HOM05D005560 ORTHO05D006862 1.1e-34 151.0 101 72.3
Sopen01g023770 Solanum pennellii HOM05D005560 ORTHO05D006862 1.1e-34 151.0 111 65.8
MELO3C015305.2 Cucumis melo HOM05D005560 ORTHO05D006862 2.5e-34 149.8 105 72.4
Lalb_Chr20g0120691 Lupinus albus HOM05D005560 ORTHO05D006862 2.5e-34 149.8 108 66.7
Sabra10G0114700 Salix brachista HOM05D005560 ORTHO05D006862 2.5e-34 149.8 127 57.5
DCAR_026978 Daucus carota HOM05D005560 ORTHO05D006862 3.3e-34 149.4 104 73.1
Lj6g0013029 Lotus japonicus HOM05D005560 ORTHO05D006862 4.3e-34 149.1 111 64.9
MD13G1149300 Malus domestica HOM05D005560 ORTHO05D006862 4.3e-34 149.1 101 70.3
RcHm_v2.0_Chr4g0425981 Rosa chinensis HOM05D005560 ORTHO05D006862 4.3e-34 149.1 111 66.7
Atru.chr4.3063 Acer truncatum HOM05D005560 ORTHO05D006862 5.6e-34 148.7 111 68.5
CDE06G0356 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 5.6e-34 148.7 112 64.3
Ciclev10006078m.g Citrus clementina HOM05D005560 ORTHO05D006862 5.6e-34 148.7 114 64.9
Nn8g38759 Nelumbo nucifera HOM05D005560 ORTHO05D006862 5.6e-34 148.7 108 66.7
Manes.11G060400 Manihot esculenta HOM05D005560 ORTHO05D006862 7.3e-34 148.3 108 65.7
THA.LOC104827102 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 7.3e-34 148.3 111 64.9
CsaV3_1G038810 Cucumis sativus L. HOM05D005560 ORTHO05D006862 9.5e-34 147.9 105 71.4
Lalb_Chr18g0058561 Lupinus albus HOM05D005560 ORTHO05D006862 9.5e-34 147.9 111 64.0
TWI09G0868 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 2.1e-33 146.7 111 64.9
Sed0008051 Sechium edule HOM05D005560 ORTHO05D006862 2.8e-33 146.4 105 67.6
Sc13g0007210 Simmondsia chinensis HOM05D005560 ORTHO05D006862 2.8e-33 146.4 111 65.8
FvH4_4g20620 Fragaria vesca HOM05D005560 ORTHO05D006862 3.6e-33 146.0 111 65.8
VMungo0540G1255 Vigna mungo HOM05D005560 ORTHO05D006862 8.0e-33 144.8 111 65.8
CAN.G1860.1 Capsicum annuum HOM05D005560 ORTHO05D006862 1.4e-32 144.1 111 64.9
Hma1.2p1_1400F.1_g280950 Hydrangea macrophylla HOM05D005560 ORTHO05D006862 1.4e-32 144.1 104 68.3
Phvul.006G120000 Phaseolus vulgaris HOM05D005560 ORTHO05D006862 1.8e-32 143.7 111 64.9
Ah.13g071490 Amaranthus hybridus HOM05D005560 ORTHO05D006862 2.3e-32 143.3 111 66.7
EL10Ac3g05546 Beta vulgaris HOM05D005560 ORTHO05D006862 3.1e-32 142.9 161 49.7
CARHR287970 Cardamine hirsuta HOM05D005560 ORTHO05D006862 1.2e-31 141.0 106 66.0
Aa31LG11G8340 Aethionema arabicum HOM05D005560 ORTHO05D006862 1.5e-31 140.6 106 66.0
Cpa.g.sc9.16 Carica papaya HOM05D005560 ORTHO05D006862 1.5e-31 140.6 111 64.9
ECA246G4816 Erigeron canadensis HOM05D005560 ORTHO05D006862 2.0e-31 140.2 106 65.1
Gohir.A02G055900 Gossypium hirsutum HOM05D005560 ORTHO05D006862 2.0e-31 140.2 111 63.1
Gohir.D02G061100 Gossypium hirsutum HOM05D005560 ORTHO05D006862 2.0e-31 140.2 111 63.1
Glyma.17G036700 Glycine max HOM05D005560 ORTHO05D006862 2.6e-31 139.8 106 67.0
MBI10_g06741_MAGBIO Magnolia biondii HOM05D005560 ORTHO05D006862 2.6e-31 139.8 104 64.4
PSO063G2615 Papaver somniferum HOM05D005560 ORTHO05D006862 2.6e-31 139.8 100 67.0
Duzib212G0918 Durio zibethinus HOM05D005560 ORTHO05D006862 3.4e-31 139.4 111 62.2
Thhalv10005160m.g Eutrema salsugineum HOM05D005560 ORTHO05D006862 3.4e-31 139.4 106 66.0
PSO782G0665 Papaver somniferum HOM05D005560 ORTHO05D006862 3.4e-31 139.4 100 66.0
THA.LOC104818873 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 3.4e-31 139.4 111 61.3
CANSAT78G0499 Cannabis sativa HOM05D005560 ORTHO05D006862 4.4e-31 139.0 111 64.9
CiPaw.02G072600 Carya illinoinensis HOM05D005560 ORTHO05D006862 4.4e-31 139.0 104 67.3
Glyma.09G033400 Glycine max HOM05D005560 ORTHO05D006862 4.4e-31 139.0 126 57.1
Gohir.A10G174500 Gossypium hirsutum HOM05D005560 ORTHO05D006862 4.4e-31 139.0 111 61.3
CiPaw.01G134900 Carya illinoinensis HOM05D005560 ORTHO05D006862 7.5e-31 138.3 111 62.2
arahy.Tifrunner.gnm1.ann1.K4HITJ Arachis hypogaea HOM05D005560 ORTHO05D006862 9.8e-31 137.9 111 62.2
CAN.G484.71 Capsicum annuum HOM05D005560 ORTHO05D006862 9.8e-31 137.9 111 62.2
Sp2g19850 Schrenkiella parvula HOM05D005560 ORTHO05D006862 9.8e-31 137.9 106 66.0
AL8G23330 Arabidopsis lyrata HOM05D005560 ORTHO05D006862 1.7e-30 137.1 106 65.1
BcaC04g23733 Brassica carinata HOM05D005560 ORTHO05D006862 1.7e-30 137.1 106 65.1
GSVIVG01034955001 Vitis vinifera HOM05D001281 ORTHO05D001139 1.7e-30 137.1 147 53.7
A09p04870 Brassica napus HOM05D005560 ORTHO05D006862 2.2e-30 136.7 117 60.7
BraA09t36124Z Brassica rapa HOM05D005560 ORTHO05D006862 2.2e-30 136.7 117 60.7
Carub.0008s0942 Capsella rubella HOM05D005560 ORTHO05D006862 2.9e-30 136.3 106 65.1
Aqoxy5G02923 Aquilegia oxysepala HOM05D005560 ORTHO05D006862 3.7e-30 136.0 111 62.2
BcaB04g19617 Brassica carinata HOM05D005560 ORTHO05D006862 3.7e-30 136.0 106 65.1
C09p05260 Brassica napus HOM05D005560 ORTHO05D006862 3.7e-30 136.0 106 65.1
BolC9t53453H Brassica oleracea HOM05D005560 ORTHO05D006862 3.7e-30 136.0 106 65.1
Psat0s5068g0040 Pisum sativum HOM05D005560 ORTHO05D006862 3.7e-30 136.0 104 63.5
ClCG03G017390 Citrullus lanatus HOM05D005560 ORTHO05D006862 4.9e-30 135.6 98 67.3
Hund11992 Selenicereus undatus HOM05D005560 ORTHO05D006862 4.9e-30 135.6 99 65.7
Haze_01347 Corylus avellana HOM05D005560 ORTHO05D006862 6.4e-30 135.2 104 64.4
AT5G49540 Arabidopsis thaliana HOM05D005560 ORTHO05D006862 8.3e-30 134.8 106 64.2
HanXRQChr01g0022341 Helianthus annuus HOM05D005560 ORTHO05D006862 1.4e-29 134.0 89 69.7
SEGI_13216 Sequoiadendron giganteum HOM05D005560 ORTHO05D006862 1.9e-29 133.7 112 58.9
BolC7t44528H Brassica oleracea HOM05D005560 ORTHO05D006862 2.4e-29 133.3 106 64.2
A06p38280 Brassica napus HOM05D005560 ORTHO05D006862 3.2e-29 132.9 106 64.2
Nitab4.5_0002561g0080 Nicotiana tabacum HOM05D005560 ORTHO05D006862 3.2e-29 132.9 104 62.5
PGR004G2070 Punica granatum HOM05D005560 ORTHO05D006862 4.1e-29 132.5 111 63.1
Sed0013449 Sechium edule HOM05D005560 ORTHO05D006862 4.1e-29 132.5 98 66.3
QL02p001630 Quercus lobata HOM05D005560 ORTHO05D006862 9.2e-29 131.3 90 68.9
HPP92_015326 Vanilla planifolia HOM05D005560 ORTHO05D006862 9.2e-29 131.3 113 60.2
Potri.010G148600 Populus trichocarpa HOM05D005560 ORTHO05D006862 2.1e-28 130.2 106 58.5
Gohir.D10G181000 Gossypium hirsutum HOM05D005560 ORTHO05D006862 2.7e-28 129.8 112 58.0
Lsat_1_v5_gn_6_116081 Lactuca sativa HOM05D005560 ORTHO05D006862 3.5e-28 129.4 104 65.4
Eucgr.F02752 Eucalyptus grandis HOM05D005560 ORTHO05D006862 4.6e-28 129.0 164 47.0
AUR62016242 Chenopodium quinoa HOM05D005560 ORTHO05D006862 1.7e-27 127.1 80 72.5
ATR0598G271 Amborella trichopoda HOM05D005560 ORTHO05D006862 3.0e-27 126.3 105 58.1
Gorai.005G068700 Gossypium raimondii HOM05D005560 ORTHO05D006862 3.0e-27 126.3 136 51.5
Lsat_1_v5_gn_3_139661 Lactuca sativa HOM05D005560 ORTHO05D006862 3.9e-27 125.9 98 66.3
TWI53G0383 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 5.1e-27 125.6 104 61.5
Gorai.011G202500 Gossypium raimondii HOM05D005560 ORTHO05D006862 1.9e-26 123.6 112 56.2
Zm00001eb295100 Zea mays HOM05D005560 ORTHO05D006862 4.3e-26 122.5 94 59.6
Thecc.04G305600 Theobroma cacao HOM05D005560 ORTHO05D006862 7.3e-26 121.7 110 57.3
HanXRQChr10g0310551 Helianthus annuus HOM05D005560 ORTHO05D006862 9.5e-26 121.3 78 71.8
Oeu052158.1 Olea europaea HOM05D005560 ORTHO05D006862 1.6e-25 120.6 109 60.6
Zm00001eb343110 Zea mays HOM05D005560 ORTHO05D006862 6.2e-25 118.6 94 57.4
CDE07G1301 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 3.1e-24 116.3 79 69.6
BraA06t26743Z Brassica rapa HOM05D005560 ORTHO05D006862 6.8e-24 115.2 104 57.7
Mapoly0008s0274 Marchantia polymorpha HOM05D005560 ORTHO05D006862 6.8e-24 115.2 101 55.4
AagrBONN_evm.TU.Sc2ySwM_362.2649 Anthoceros agrestis HOM05D005560 ORTHO05D006862 2.9e-22 109.8 99 53.5
AUR62032779 Chenopodium quinoa HOM05D005560 ORTHO05D006862 4.9e-22 109.0 118 53.4
SMO117G0178 Selaginella moellendorffii HOM05D005560 ORTHO05D006862 1.4e-21 107.5 89 56.2
CBR_g22909 Chara braunii HOM05D005560 ORTHO05D006862 7.8e-20 101.7 104 48.1
AagrBONN_evm.TU.Sc2ySwM_340.65 Anthoceros agrestis HOM05D005560 ORTHO05D006862 1.3e-19 100.9 83 57.8
Nitab4.5_0008521g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 1.1e-18 97.8 67 70.1
Nn8g41304 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.2e-17 94.4 56 75.0
arahy.Tifrunner.gnm1.ann1.CCFX3U Arachis hypogaea HOM05D001281 ORTHO05D001139 1.6e-17 94.0 123 48.0
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 1.6e-17 94.0 66 71.2
PRCOL_00001634 Prasinoderma coloniale HOM05D005560 ORTHO05D006862 7.1e-13 78.6 104 42.3
Nn1g07816 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.7e-11 73.9 58 56.9
TWI73G0491 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 2.8e-09 66.6 52 57.7
arahy.Tifrunner.gnm1.ann1.NI9QGM Arachis hypogaea HOM05D005560 ORTHO05D006862 3.1e-08 63.2 54 51.9
Cre14.g614250 Chlamydomonas reinhardtii HOM05D005560 ORTHO05D006862 3.8e-06 56.2 106 31.1


User provided reference genes

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