Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold156G37278 Striga asiatica HOM05D003029 ORTHO05D003413 4.4e-219 764.6 468 100.0
SalBow6G0319 Salvia bowleyana HOM05D003029 ORTHO05D003413 4.3e-41 173.3 558 35.3
SalBow6G1280 Salvia bowleyana HOM05D003029 ORTHO05D003413 4.3e-41 173.3 558 35.3
Migut.D02515 Erythranthe guttata HOM05D003029 ORTHO05D003413 4.6e-35 153.3 505 40.0
Nn3g20075 Nelumbo nucifera HOM05D003029 ORTHO05D003413 7.2e-20 102.8 280 33.6
Dinv14526 Davidia involucrata HOM05D003029 ORTHO05D003413 4.6e-19 100.1 548 37.4
Lj2C1122G5 Lonicera japonica HOM05D003029 ORTHO05D003413 4.6e-19 100.1 315 30.5
Haze_11649 Corylus avellana HOM05D003029 ORTHO05D003413 2.3e-18 97.8 279 30.1
BolC1t05561H Brassica oleracea HOM05D003029 ORTHO05D003413 1.5e-17 95.1 516 29.8
Cfa014958 Carpinus fangiana HOM05D003029 ORTHO05D003413 2.0e-17 94.7 279 29.4
Nn3g20072 Nelumbo nucifera HOM05D003029 ORTHO05D003413 4.3e-17 93.6 280 30.0
PSO017G1724 Papaver somniferum HOM05D003029 ORTHO05D003413 9.7e-17 92.4 252 31.7
RcHm_v2.0_Chr4g0413691 Rosa chinensis HOM05D003029 ORTHO05D003413 2.2e-16 91.3 256 31.6
FvH4_4g13340 Fragaria vesca HOM05D003029 ORTHO05D003413 6.3e-16 89.7 278 29.9
FAN12G1114 Fragaria x ananassa HOM05D003029 ORTHO05D003413 6.3e-16 89.7 278 29.9
FAN22G0425 Fragaria x ananassa HOM05D003029 ORTHO05D003413 1.4e-15 88.6 254 30.7
Prupe.1G164200 Prunus persica HOM05D003029 ORTHO05D003413 1.4e-15 88.6 255 32.5
Sc05g0001900 Simmondsia chinensis HOM05D003029 ORTHO05D003413 1.4e-15 88.6 291 28.5
GSVIVG01004954001 Vitis vinifera HOM05D003029 ORTHO05D003413 2.4e-15 87.8 253 30.0
FAN17G0226 Fragaria x ananassa HOM05D003029 ORTHO05D003413 3.1e-15 87.4 278 28.4
PSO063G2363 Papaver somniferum HOM05D003029 ORTHO05D003413 4.1e-15 87.0 252 31.3
Sabra16G0202400 Salix brachista HOM05D003029 ORTHO05D003413 4.1e-15 87.0 279 26.5
SalBow3G0925 Salvia bowleyana HOM05D003029 ORTHO05D003413 4.1e-15 87.0 243 32.1
TWI36G0576 Tripterygium wilfordii HOM05D003029 ORTHO05D003413 5.3e-15 86.7 281 31.0
TAR362G1056 Trochodendron aralioides HOM05D003029 ORTHO05D003413 1.5e-14 85.1 546 31.1
vmacro02792 Vaccinium macrocarpon HOM05D003029 ORTHO05D003413 2.0e-14 84.7 236 28.4
Actinidia23384 Actinidia chinensis HOM05D003029 ORTHO05D003413 2.6e-14 84.3 261 31.0
BcaB04g21298 Brassica carinata HOM05D003029 ORTHO05D003413 4.5e-14 83.6 507 30.0
Duzib151G1197 Durio zibethinus HOM05D003029 ORTHO05D003413 4.5e-14 83.6 149 38.3
FAN07G2221 Fragaria x ananassa HOM05D003029 ORTHO05D003413 5.9e-14 83.2 278 29.9
TWI75G0963 Tripterygium wilfordii HOM05D003029 ORTHO05D003413 5.9e-14 83.2 279 29.0
CiPaw.01G117300 Carya illinoinensis HOM05D003029 ORTHO05D003413 1.0e-13 82.4 280 28.9
Haze_03354 Corylus avellana HOM05D003029 ORTHO05D003413 1.0e-13 82.4 250 30.0
Prupe.8G196300 Prunus persica HOM05D003029 ORTHO05D003413 1.0e-13 82.4 564 27.0
Cc01_g16520 Coffea canephora HOM05D003029 ORTHO05D003413 1.3e-13 82.0 614 33.7
Manes.12G049400 Manihot esculenta HOM05D003029 ORTHO05D003413 1.7e-13 81.6 281 29.2
Migut.G00757 Erythranthe guttata HOM05D003029 ORTHO05D003413 3.8e-13 80.5 278 28.8
Rhsim13G0050000 Rhododendron simsii HOM05D003029 ORTHO05D003413 3.8e-13 80.5 272 27.9
TWI36G1114 Tripterygium wilfordii HOM05D003029 ORTHO05D003413 3.8e-13 80.5 503 28.6
VMungo0251G2529 Vigna mungo HOM05D003029 ORTHO05D003413 3.8e-13 80.5 86 50.0
Nitab4.5_0002260g0050 Nicotiana tabacum HOM05D003029 ORTHO05D003413 8.5e-13 79.3 236 30.9
Potri.017G058500 Populus trichocarpa HOM05D003029 ORTHO05D003413 8.5e-13 79.3 259 29.0
CSS0049755 Camellia sinensis var. sinensis HOM05D003029 ORTHO05D003413 1.1e-12 79.0 241 28.2
Thhalv10004154m.g Eutrema salsugineum HOM05D003029 ORTHO05D003413 1.1e-12 79.0 283 28.3
Lj4g0000581 Lotus japonicus HOM05D003029 ORTHO05D003413 1.1e-12 79.0 149 36.2
DCAR_012677 Daucus carota HOM05D003029 ORTHO05D003413 1.4e-12 78.6 325 25.2
CiPaw.02G064700 Carya illinoinensis HOM05D003029 ORTHO05D003413 1.9e-12 78.2 279 28.3
Oeu057857.3 Olea europaea HOM05D003029 ORTHO05D003413 1.9e-12 78.2 74 50.0
Actinidia35843 Actinidia chinensis HOM05D003029 ORTHO05D003413 3.2e-12 77.4 131 35.9
Thecc.04G195700 Theobroma cacao HOM05D003029 ORTHO05D003413 3.2e-12 77.4 149 35.6
COL.COLO4_20221 Corchorus olitorius HOM05D003029 ORTHO05D003413 4.2e-12 77.0 240 30.0
Gohir.D02G022800 Gossypium hirsutum HOM05D003029 ORTHO05D003413 4.2e-12 77.0 74 52.7
TAR636G0249 Trochodendron aralioides HOM05D003029 ORTHO05D003413 4.2e-12 77.0 241 29.5
CiPaw.14G040000 Carya illinoinensis HOM05D003029 ORTHO05D003413 5.5e-12 76.6 288 28.1
Ca_17981_v3 Cicer arietinum L. HOM05D003029 ORTHO05D003413 5.5e-12 76.6 149 35.6
Peaxi162Scf00423g00411 Petunia axillaris HOM05D003029 ORTHO05D003413 5.5e-12 76.6 241 30.7
C03p42770 Brassica napus HOM05D003029 ORTHO05D003413 7.2e-12 76.3 517 31.1
BolC3t16546H Brassica oleracea HOM05D003029 ORTHO05D003413 7.2e-12 76.3 517 31.9
Phvul.003G050700 Phaseolus vulgaris HOM05D003029 ORTHO05D003413 7.2e-12 76.3 171 33.3
Sabra16G0202200 Salix brachista HOM05D003029 ORTHO05D003413 7.2e-12 76.3 282 26.6
TPR.G11807 Trifolium pratense HOM05D003029 ORTHO05D003413 7.2e-12 76.3 79 49.4
BraA03t12696Z Brassica rapa HOM05D003029 ORTHO05D003413 9.4e-12 75.9 517 30.8
Gorai.006G223500 Gossypium raimondii HOM05D003029 ORTHO05D003413 9.4e-12 75.9 151 35.8
Actinidia11454 Actinidia chinensis HOM05D003029 ORTHO05D003413 1.2e-11 75.5 264 26.9
VMungo0251G3135 Vigna mungo HOM05D003029 ORTHO05D003413 1.2e-11 75.5 147 33.3
BcaC05g29857 Brassica carinata HOM05D003029 ORTHO05D003413 1.6e-11 75.1 483 30.2
Gohir.A10G127900 Gossypium hirsutum HOM05D003029 ORTHO05D003413 1.6e-11 75.1 78 48.7
Gohir.D10G138100 Gossypium hirsutum HOM05D003029 ORTHO05D003413 1.6e-11 75.1 74 50.0
Gorai.011G153200 Gossypium raimondii HOM05D003029 ORTHO05D003413 1.6e-11 75.1 74 50.0
C07p39290 Brassica napus HOM05D003029 ORTHO05D003413 2.1e-11 74.7 524 30.2
BolC7t44449H Brassica oleracea HOM05D003029 ORTHO05D003413 2.1e-11 74.7 524 30.2
Glyma.05G152400 Glycine max HOM05D003029 ORTHO05D003413 2.1e-11 74.7 74 51.4
Sabra17G0052100 Salix brachista HOM05D003029 ORTHO05D003413 2.1e-11 74.7 256 28.1
Sc13g0000380 Simmondsia chinensis HOM05D003029 ORTHO05D003413 2.1e-11 74.7 82 46.3
TAR365G0314 Trochodendron aralioides HOM05D003029 ORTHO05D003413 2.1e-11 74.7 145 37.9
A03p35170 Brassica napus HOM05D003029 ORTHO05D003413 2.7e-11 74.3 526 31.0
DCAR_026643 Daucus carota HOM05D003029 ORTHO05D003413 2.7e-11 74.3 252 26.6
Thhalv10020618m.g Eutrema salsugineum HOM05D003029 ORTHO05D003413 2.7e-11 74.3 242 27.7
Glyma.11G255200 Glycine max HOM05D003029 ORTHO05D003413 2.7e-11 74.3 74 48.6
Nitab4.5_0000676g0030 Nicotiana tabacum HOM05D003029 ORTHO05D003413 2.7e-11 74.3 241 30.7
Nitab4.5_0006920g0030 Nicotiana tabacum HOM05D003029 ORTHO05D003413 2.7e-11 74.3 85 45.9
Phvul.003G050800 Phaseolus vulgaris HOM05D003029 ORTHO05D003413 2.7e-11 74.3 86 45.3
MSTRG.4243 Avicennia marina HOM05D003029 ORTHO05D003413 3.6e-11 73.9 83 42.2
ECA248G1735 Erigeron canadensis HOM05D003029 ORTHO05D003413 3.6e-11 73.9 77 44.2
Atru.chr4.1590 Acer truncatum HOM05D003029 ORTHO05D003413 4.7e-11 73.6 74 51.4
Duzib212G0885 Durio zibethinus HOM05D003029 ORTHO05D003413 4.7e-11 73.6 74 50.0
Gohir.A02G019500 Gossypium hirsutum HOM05D003029 ORTHO05D003413 4.7e-11 73.6 74 50.0
Nitab4.5_0006920g0010 Nicotiana tabacum HOM05D003029 ORTHO05D003413 4.7e-11 73.6 239 30.1
Sabra17G0052200 Salix brachista HOM05D003029 ORTHO05D003413 4.7e-11 73.6 257 28.8
MD04G1017000 Malus domestica HOM05D003029 ORTHO05D003413 6.1e-11 73.2 255 28.6
Manes.13G051200 Manihot esculenta HOM05D003029 ORTHO05D003413 6.1e-11 73.2 241 29.0
SGA_v2.0_scaffold270G46323 Striga asiatica HOM05D003029 ORTHO05D003413 6.1e-11 73.2 73 46.6
TWI18G0251 Tripterygium wilfordii HOM05D003029 ORTHO05D003413 6.1e-11 73.2 73 46.6
CSS0036198 Camellia sinensis var. sinensis HOM05D003029 ORTHO05D003413 7.9e-11 72.8 272 28.3
Rhsim02G0061600 Rhododendron simsii HOM05D003029 ORTHO05D003413 7.9e-11 72.8 127 33.9
Gohir.D09G199800 Gossypium hirsutum HOM05D003029 ORTHO05D003413 1.0e-10 72.4 151 34.4
HanXRQChr01g0022171 Helianthus annuus HOM05D003029 ORTHO05D003413 1.0e-10 72.4 80 50.0
Atru.chr6.1447 Acer truncatum HOM05D003029 ORTHO05D003413 1.4e-10 72.0 143 34.3
CAN.G765.36 Capsicum annuum HOM05D003029 ORTHO05D003413 1.4e-10 72.0 75 50.7
Cpa.g.sc157.52 Carica papaya HOM05D003029 ORTHO05D003413 1.4e-10 72.0 82 45.1
PGSC0003DMG400015747 Solanum tuberosum HOM05D003029 ORTHO05D003413 1.4e-10 72.0 74 48.6
arahy.Tifrunner.gnm1.ann1.R3AU9F Arachis hypogaea HOM05D003029 ORTHO05D003413 1.8e-10 71.6 74 45.9
BraA01t04389Z Brassica rapa HOM05D003029 ORTHO05D003413 1.8e-10 71.6 493 29.2
Duzib268G0331 Durio zibethinus HOM05D003029 ORTHO05D003413 1.8e-10 71.6 238 29.4
Ah.13g077980 Amaranthus hybridus HOM05D003029 ORTHO05D003413 3.0e-10 70.9 74 47.3
CAN.G767.12 Capsicum annuum HOM05D003029 ORTHO05D003413 3.0e-10 70.9 247 27.5
Ciclev10005071m.g Citrus clementina HOM05D003029 ORTHO05D003413 3.0e-10 70.9 101 42.6
Cc03_g08440 Coffea canephora HOM05D003029 ORTHO05D003413 3.0e-10 70.9 72 43.1
MD04G1017100 Malus domestica HOM05D003029 ORTHO05D003413 3.0e-10 70.9 240 27.5
GSVIVG01021020001 Vitis vinifera HOM05D003029 ORTHO05D003413 3.0e-10 70.9 280 28.2
DCAR_004743 Daucus carota HOM05D003029 ORTHO05D003413 3.9e-10 70.5 220 27.7
Glyma.18G001900 Glycine max HOM05D003029 ORTHO05D003413 3.9e-10 70.5 74 45.9
Sopen05g032240 Solanum pennellii HOM05D003029 ORTHO05D003413 3.9e-10 70.5 74 47.3
arahy.Tifrunner.gnm1.ann1.AU34HA Arachis hypogaea HOM05D003029 ORTHO05D003413 5.1e-10 70.1 151 31.1
Glyma.08G110100 Glycine max HOM05D003029 ORTHO05D003413 5.1e-10 70.1 150 32.0
Solyc05g053770.4 Solanum lycopersicum HOM05D003029 ORTHO05D003413 5.1e-10 70.1 74 48.6
MD13G1282000 Malus domestica HOM05D003029 ORTHO05D003413 6.7e-10 69.7 74 44.6
Actinidia21255 Actinidia chinensis HOM05D003029 ORTHO05D003413 8.8e-10 69.3 249 24.5
MBI07_g27661_MAGBIO Magnolia biondii HOM05D003029 ORTHO05D003413 8.8e-10 69.3 112 39.3
Potri.017G058600 Populus trichocarpa HOM05D003029 ORTHO05D003413 8.8e-10 69.3 256 26.6
Lalb_Chr23g0278361 Lupinus albus HOM05D003029 ORTHO05D003413 1.1e-09 68.9 144 34.0
Sp3g06230 Schrenkiella parvula HOM05D003029 ORTHO05D003413 1.1e-09 68.9 246 26.8
THA.LOC104822483 Tarenaya hassleriana HOM05D003029 ORTHO05D003413 1.1e-09 68.9 79 44.3
Ah.04g149350 Amaranthus hybridus HOM05D003029 ORTHO05D003413 1.5e-09 68.6 73 45.2
AT5G43490 Arabidopsis thaliana HOM05D003029 ORTHO05D003413 1.5e-09 68.6 134 35.8
BcaC06g30775 Brassica carinata HOM05D003029 ORTHO05D003413 1.5e-09 68.6 493 30.6
BNapus_Darmor_BZH_scaffold_109p00150 Brassica napus HOM05D003029 ORTHO05D003413 1.5e-09 68.6 260 27.3
Oeu043441.1 Olea europaea HOM05D003029 ORTHO05D003413 1.5e-09 68.6 247 27.1
Psat7g075040 Pisum sativum HOM05D003029 ORTHO05D003413 1.5e-09 68.6 81 44.4
Solyc12g098463.1 Solanum lycopersicum HOM05D003029 ORTHO05D003413 1.5e-09 68.6 85 44.7
A05p40910 Brassica napus HOM05D003029 ORTHO05D003413 2.0e-09 68.2 490 26.3
BraA05t22820Z Brassica rapa HOM05D003029 ORTHO05D003413 2.0e-09 68.2 490 26.3
Carub.0008s0826 Capsella rubella HOM05D003029 ORTHO05D003413 2.0e-09 68.2 263 25.5
Sopen12g033250 Solanum pennellii HOM05D003029 ORTHO05D003413 2.0e-09 68.2 85 44.7
Actinidia21254 Actinidia chinensis HOM05D003029 ORTHO05D003413 2.6e-09 67.8 131 32.8
Aqoxy2G03937 Aquilegia oxysepala HOM05D003029 ORTHO05D003413 3.3e-09 67.4 234 26.1
AL625U10010 Arabidopsis lyrata HOM05D003029 ORTHO05D003413 3.3e-09 67.4 246 26.8
Medtr8g081570 Medicago truncatula HOM05D003029 ORTHO05D003413 3.3e-09 67.4 81 43.2
Oeu056423.1 Olea europaea HOM05D003029 ORTHO05D003413 3.3e-09 67.4 73 47.9
Sp3g06210 Schrenkiella parvula HOM05D003029 ORTHO05D003413 3.3e-09 67.4 276 27.5
BcaC05g29734 Brassica carinata HOM05D003029 ORTHO05D003413 4.4e-09 67.0 263 25.9
Gorai.005G028200 Gossypium raimondii HOM05D003029 ORTHO05D003413 4.4e-09 67.0 112 38.4
Manes.03G144600 Manihot esculenta HOM05D003029 ORTHO05D003413 5.7e-09 66.6 240 26.7
AUR62020859 Chenopodium quinoa HOM05D003029 ORTHO05D003413 7.4e-09 66.2 289 24.6
Lalb_Chr07g0186821 Lupinus albus HOM05D003029 ORTHO05D003413 7.4e-09 66.2 92 40.2
CANSAT78G1052 Cannabis sativa HOM05D003029 ORTHO05D003413 1.3e-08 65.5 70 47.1
unitig_8.g3407 Utricularia gibba HOM05D003029 ORTHO05D003413 1.7e-08 65.1 98 40.8
Sed0025519 Sechium edule HOM05D003029 ORTHO05D003413 2.2e-08 64.7 95 40.0
Carub.0003s0681 Capsella rubella HOM05D003029 ORTHO05D003413 2.8e-08 64.3 244 28.3
ClCG06G007970 Citrullus lanatus HOM05D003029 ORTHO05D003413 2.8e-08 64.3 95 40.0
Sp2g18960 Schrenkiella parvula HOM05D003029 ORTHO05D003413 2.8e-08 64.3 75 46.7
Zm00001eb064410 Zea mays HOM05D003029 ORTHO05D003413 3.7e-08 63.9 143 29.4
AL3G18580 Arabidopsis lyrata HOM05D003029 ORTHO05D003413 4.8e-08 63.5 271 25.8
CARHR292000 Cardamine hirsuta HOM05D003029 ORTHO05D003413 4.8e-08 63.5 157 31.8
CsaV3_2G011760 Cucumis sativus L. HOM05D003029 ORTHO05D003413 4.8e-08 63.5 80 43.8
HPP92_025250 Vanilla planifolia HOM05D003029 ORTHO05D003413 4.8e-08 63.5 146 30.1
ATR0561G140 Amborella trichopoda HOM05D003029 ORTHO05D003413 6.3e-08 63.2 72 43.1
C05p60010 Brassica napus HOM05D003029 ORTHO05D003413 6.3e-08 63.2 97 34.0
BraA06t26818Z Brassica rapa HOM05D003029 ORTHO05D003413 6.3e-08 63.2 157 31.2
AUR62018560 Chenopodium quinoa HOM05D003029 ORTHO05D003413 8.2e-08 62.8 282 25.2
MSTRG.9800 Avicennia marina HOM05D003029 ORTHO05D003413 1.1e-07 62.4 239 27.2
Lalb_Chr12g0205611 Lupinus albus HOM05D003029 ORTHO05D003413 1.1e-07 62.4 53 56.6
MBI07_g42750_MAGBIO Magnolia biondii HOM05D003029 ORTHO05D003413 1.1e-07 62.4 252 27.0
Sed0005118 Sechium edule HOM05D003029 ORTHO05D003413 1.4e-07 62.0 95 38.9
CDE05G0723 Ceratophyllum demersum HOM05D003029 ORTHO05D003413 1.8e-07 61.6 111 31.5
Nitab4.5_0000850g0180 Nicotiana tabacum HOM05D003029 ORTHO05D003413 1.8e-07 61.6 235 28.5
Zm00001eb210840 Zea mays HOM05D003029 ORTHO05D003413 1.8e-07 61.6 139 31.7
ClCG05G003130 Citrullus lanatus HOM05D003029 ORTHO05D003413 2.4e-07 61.2 75 40.0
Hma1.2p1_0349F.1_g132190 Hydrangea macrophylla HOM05D003029 ORTHO05D003413 4.1e-07 60.5 79 40.5
EL10Ac3g07458 Beta vulgaris HOM05D003029 ORTHO05D003413 7.0e-07 59.7 286 23.4
A06p39050 Brassica napus HOM05D003029 ORTHO05D003413 7.0e-07 59.7 261 27.6
MELO3C020427.2 Cucumis melo HOM05D003029 ORTHO05D003413 7.0e-07 59.7 80 42.5
Eucgr.H00027 Eucalyptus grandis HOM05D003029 ORTHO05D003413 9.1e-07 59.3 84 39.3
MELO3C006294.2 Cucumis melo HOM05D003029 ORTHO05D003413 1.2e-06 58.9 75 42.7
CsaV3_3G010750 Cucumis sativus L. HOM05D003029 ORTHO05D003413 1.2e-06 58.9 75 42.7
Rhsim09G0059700 Rhododendron simsii HOM05D003029 ORTHO05D003413 1.2e-06 58.9 67 47.8
SHI28770 Sapria himalayana HOM05D003029 ORTHO05D003413 2.6e-06 57.8 83 39.8
PGR083G2864 Punica granatum HOM05D003029 ORTHO05D003413 4.5e-06 57.0 195 28.7
Lsat_1_v5_gn_1_70641 Lactuca sativa HOM05D003029 ORTHO05D003413 5.9e-06 56.6 262 24.0
Lalb_Chr13g0294851 Lupinus albus HOM05D003029 ORTHO05D003413 5.9e-06 56.6 92 39.1
TAR633G2732 Trochodendron aralioides HOM05D003029 ORTHO05D003413 5.9e-06 56.6 29 75.9
HPP92_006969 Vanilla planifolia HOM05D003029 ORTHO05D003413 5.9e-06 56.6 29 75.9
HanXRQChr11g0344321 Helianthus annuus HOM05D003029 ORTHO05D003413 7.7e-06 56.2 257 26.1


User provided reference genes

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