Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold156G37265 Striga asiatica HOM05D005417 ORTHO05D002591 8.4e-189 663.7 372 100.0
MSTRG.18834 Avicennia marina HOM05D005417 ORTHO05D002591 6.9e-58 228.8 457 44.9
SalBow6G1220 Salvia bowleyana HOM05D005417 ORTHO05D002591 1.1e-52 211.5 382 45.8
Migut.D02505 Erythranthe guttata HOM05D005417 ORTHO05D002591 1.1e-50 204.9 464 35.6
Oeu051530.1 Olea europaea HOM05D005417 ORTHO05D002591 2.7e-46 190.3 405 40.2
Dinv19167 Davidia involucrata HOM05D005417 ORTHO05D002591 3.5e-46 189.9 391 37.3
MSTRG.20970 Avicennia marina HOM05D005417 ORTHO05D002591 6.0e-46 189.1 412 38.1
Oeu007785.1 Olea europaea HOM05D005417 ORTHO05D002591 3.0e-45 186.8 395 38.0
Cfa010419 Carpinus fangiana HOM05D005417 ORTHO05D002591 1.5e-44 184.5 378 43.4
CiPaw.13G049000 Carya illinoinensis HOM05D005417 ORTHO05D002591 3.3e-44 183.3 422 41.5
QL09p051098 Quercus lobata HOM05D005417 ORTHO05D002591 4.3e-44 183.0 403 36.5
QL09p050923 Quercus lobata HOM05D005417 ORTHO05D002591 1.6e-43 181.0 390 36.9
CSS0019537 Camellia sinensis var. sinensis HOM05D005417 ORTHO05D002591 4.8e-43 179.5 410 34.9
Potri.002G246400 Populus trichocarpa HOM05D005417 ORTHO05D002591 4.8e-43 179.5 136 66.9
Thecc.01G219200 Theobroma cacao HOM05D005417 ORTHO05D002591 6.3e-43 179.1 424 41.5
CiPaw.14G038800 Carya illinoinensis HOM05D005417 ORTHO05D002591 1.8e-42 177.6 423 40.9
Manes.12G047700 Manihot esculenta HOM05D005417 ORTHO05D002591 3.1e-42 176.8 390 38.7
Actinidia39427 Actinidia chinensis HOM05D005417 ORTHO05D002591 4.1e-42 176.4 223 47.5
Sabra02G0187500 Salix brachista HOM05D005417 ORTHO05D002591 5.3e-42 176.0 190 53.7
Duzib211G0292 Durio zibethinus HOM05D005417 ORTHO05D002591 7.6e-41 172.2 419 41.5
CAN.G181.55 Capsicum annuum HOM05D005417 ORTHO05D002591 1.7e-40 171.0 231 45.9
Nitab4.5_0002985g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 1.1e-39 168.3 329 35.6
Dinv12644 Davidia involucrata HOM05D005417 ORTHO05D002591 3.2e-39 166.8 386 43.5
Prupe.8G197900 Prunus persica HOM05D005417 ORTHO05D002591 1.6e-38 164.5 416 34.4
Manes.13G049800 Manihot esculenta HOM05D005417 ORTHO05D002591 2.7e-38 163.7 406 36.0
Rhsim13G0048000 Rhododendron simsii HOM05D005417 ORTHO05D002591 3.6e-38 163.3 402 42.0
Solyc06g007790.1 Solanum lycopersicum HOM05D005417 ORTHO05D002591 3.9e-37 159.8 237 41.8
Eucgr.K02134 Eucalyptus grandis HOM05D005417 ORTHO05D002591 5.1e-37 159.5 334 37.1
Sopen06g002670 Solanum pennellii HOM05D005417 ORTHO05D002591 5.1e-37 159.5 221 44.8
Nitab4.5_0002641g0180 Nicotiana tabacum HOM05D005417 ORTHO05D002591 2.5e-36 157.1 322 35.4
Nitab4.5_0001161g0100 Nicotiana tabacum HOM05D005417 ORTHO05D002591 3.3e-36 156.8 412 39.8
PGSC0003DMG400022034 Solanum tuberosum HOM05D005417 ORTHO05D002591 9.7e-36 155.2 290 36.9
Psat3g149440 Pisum sativum HOM05D005417 ORTHO05D002591 1.3e-35 154.8 127 64.6
Cc01_g16680 Coffea canephora HOM05D005417 ORTHO05D002591 1.7e-35 154.5 201 45.8
TWI18G1450 Tripterygium wilfordii HOM05D005417 ORTHO05D002591 2.8e-35 153.7 296 40.9
Medtr7g055560 Medicago truncatula HOM05D005417 ORTHO05D002591 4.8e-35 152.9 317 37.9
Medtr7g055747 Medicago truncatula HOM05D005417 ORTHO05D002591 4.8e-35 152.9 317 37.9
Peaxi162Scf00372g00102 Petunia axillaris HOM05D005417 ORTHO05D002591 4.8e-35 152.9 401 35.7
COL.COLO4_08651 Corchorus olitorius HOM05D005417 ORTHO05D002591 2.4e-34 150.6 431 37.6
MD05G1170600 Malus domestica HOM05D005417 ORTHO05D002591 3.1e-34 150.2 136 61.0
Phvul.008G132000 Phaseolus vulgaris HOM05D005417 ORTHO05D002591 4.1e-34 149.8 124 63.7
Glyma.08G348101 Glycine max HOM05D005417 ORTHO05D002591 5.3e-34 149.4 124 66.1
arahy.Tifrunner.gnm1.ann1.K8JSLF Arachis hypogaea HOM05D005417 ORTHO05D002591 6.9e-34 149.1 370 30.8
Glyma.18G159700 Glycine max HOM05D005417 ORTHO05D002591 2.0e-33 147.5 125 62.4
Gohir.D11G145866 Gossypium hirsutum HOM05D005417 ORTHO05D002591 2.0e-33 147.5 436 36.5
Nitab4.5_0003656g0060 Nicotiana tabacum HOM05D005417 ORTHO05D002591 2.0e-33 147.5 129 64.3
Peaxi162Scf00068g00216 Petunia axillaris HOM05D005417 ORTHO05D002591 2.0e-33 147.5 232 47.0
VMungo1383G0191 Vigna mungo HOM05D005417 ORTHO05D002591 3.4e-33 146.7 288 40.6
Gohir.A07G092900 Gossypium hirsutum HOM05D005417 ORTHO05D002591 7.7e-33 145.6 376 42.8
Lalb_Chr03g0041401 Lupinus albus HOM05D005417 ORTHO05D002591 1.3e-32 144.8 139 56.8
MELO3C022719.2 Cucumis melo HOM05D005417 ORTHO05D002591 1.7e-32 144.4 128 60.2
ClCG07G002110 Citrullus lanatus HOM05D005417 ORTHO05D002591 2.2e-32 144.1 126 61.1
vmacro02785 Vaccinium macrocarpon HOM05D005417 ORTHO05D002591 2.2e-32 144.1 429 32.9
Gorai.007G156400 Gossypium raimondii HOM05D005417 ORTHO05D002591 2.9e-32 143.7 441 35.6
Nn1g07983 Nelumbo nucifera HOM05D005417 ORTHO05D002591 5.0e-32 142.9 405 39.0
Ca_03471_v3 Cicer arietinum L. HOM05D005417 ORTHO05D002591 6.5e-32 142.5 224 43.8
Lsat_1_v5_gn_9_14981 Lactuca sativa HOM05D005417 ORTHO05D002591 6.5e-32 142.5 233 46.4
Gohir.D07G097400 Gossypium hirsutum HOM05D005417 ORTHO05D002591 1.4e-31 141.4 386 41.5
Gohir.A11G139800 Gossypium hirsutum HOM05D005417 ORTHO05D002591 1.9e-31 141.0 432 34.7
TWI75G1481 Tripterygium wilfordii HOM05D005417 ORTHO05D002591 1.9e-31 141.0 400 33.8
vmacro14737 Vaccinium macrocarpon HOM05D005417 ORTHO05D002591 1.9e-31 141.0 132 61.4
PGSC0003DMG400017495 Solanum tuberosum HOM05D005417 ORTHO05D002591 2.5e-31 140.6 334 34.1
Ciclev10024373m.g Citrus clementina HOM05D005417 ORTHO05D002591 3.2e-31 140.2 423 40.4
RcHm_v2.0_Chr6g0284001 Rosa chinensis HOM05D005417 ORTHO05D002591 3.2e-31 140.2 135 63.7
Rhsim01G0253400 Rhododendron simsii HOM05D005417 ORTHO05D002591 4.2e-31 139.8 135 59.3
TAR365G0760 Trochodendron aralioides HOM05D005417 ORTHO05D002591 5.5e-31 139.4 114 63.2
Solyc09g059550.1 Solanum lycopersicum HOM05D005417 ORTHO05D002591 7.2e-31 139.0 165 53.9
Atru.chr6.1429 Acer truncatum HOM05D005417 ORTHO05D002591 9.4e-31 138.7 168 53.6
Cpa.g.sc34.103 Carica papaya HOM05D005417 ORTHO05D002591 2.1e-30 137.5 189 47.6
FAN15G1498 Fragaria x ananassa HOM05D005417 ORTHO05D002591 3.6e-30 136.7 210 47.6
ECA247G2945 Erigeron canadensis HOM05D005417 ORTHO05D002591 4.7e-30 136.3 303 37.6
Sopen09g022730 Solanum pennellii HOM05D005417 ORTHO05D002591 6.1e-30 136.0 342 35.7
HanXRQChr10g0279531 Helianthus annuus HOM05D005417 ORTHO05D002591 7.9e-30 135.6 140 59.3
TAR636G0419 Trochodendron aralioides HOM05D005417 ORTHO05D002591 7.9e-30 135.6 109 64.2
FvH4_2g18490 Fragaria vesca HOM05D005417 ORTHO05D002591 1.0e-29 135.2 135 63.7
FAN24G0779 Fragaria x ananassa HOM05D005417 ORTHO05D002591 1.0e-29 135.2 135 63.7
Aqoxy2G03972 Aquilegia oxysepala HOM05D005417 ORTHO05D002591 1.4e-29 134.8 135 52.6
ECA248G2280 Erigeron canadensis HOM05D005417 ORTHO05D002591 2.3e-29 134.0 313 38.0
PGR083G2240 Punica granatum HOM05D005417 ORTHO05D002591 3.0e-29 133.7 130 60.0
FAN27G1148 Fragaria x ananassa HOM05D005417 ORTHO05D002591 3.9e-29 133.3 210 46.2
MD10G1158800 Malus domestica HOM05D005417 ORTHO05D002591 5.1e-29 132.9 129 56.6
BcaC06g35784 Brassica carinata HOM05D005417 ORTHO05D002591 6.7e-29 132.5 163 52.1
C07p10920 Brassica napus HOM05D005417 ORTHO05D002591 6.7e-29 132.5 163 52.1
BolC7t41558H Brassica oleracea HOM05D005417 ORTHO05D002591 6.7e-29 132.5 163 52.1
HanXRQChr01g0015481 Helianthus annuus HOM05D005417 ORTHO05D002591 8.8e-29 132.1 212 44.8
CAN.G800.6 Capsicum annuum HOM05D005417 ORTHO05D002591 1.1e-28 131.7 297 37.0
A07p07230 Brassica napus HOM05D005417 ORTHO05D002591 2.0e-28 131.0 162 51.9
DCAR_012672 Daucus carota HOM05D005417 ORTHO05D002591 2.6e-28 130.6 379 31.7
Nitab4.5_0013864g0020 Nicotiana tabacum HOM05D005417 ORTHO05D002591 9.7e-28 128.6 134 56.0
AL3G40820 Arabidopsis lyrata HOM05D005417 ORTHO05D002591 1.3e-27 128.3 149 47.7
Gorai.001G104900 Gossypium raimondii HOM05D005417 ORTHO05D002591 2.2e-27 127.5 375 39.2
Nitab4.5_0003020g0050 Nicotiana tabacum HOM05D005417 ORTHO05D002591 2.2e-27 127.5 221 41.2
Sed0010610 Sechium edule HOM05D005417 ORTHO05D002591 3.7e-27 126.7 121 58.7
AT3G25130 Arabidopsis thaliana HOM05D005417 ORTHO05D002591 4.8e-27 126.3 153 49.7
BraA07t28509Z Brassica rapa HOM05D005417 ORTHO05D002591 4.8e-27 126.3 162 51.2
Sp3g22720 Schrenkiella parvula HOM05D005417 ORTHO05D002591 6.3e-27 125.9 159 47.8
Aa31sc95G70 Aethionema arabicum HOM05D005417 ORTHO05D002591 1.8e-26 124.4 369 32.8
Sc05g0001930 Simmondsia chinensis HOM05D005417 ORTHO05D002591 1.8e-26 124.4 284 36.6
Lj1g0009273 Lotus japonicus HOM05D005417 ORTHO05D002591 3.1e-26 123.6 262 40.8
MBI11_g07415_MAGBIO Magnolia biondii HOM05D005417 ORTHO05D002591 3.1e-26 123.6 111 62.2
BcaB06g26721 Brassica carinata HOM05D005417 ORTHO05D002591 6.9e-26 122.5 162 48.1
Carub.0003s2546 Capsella rubella HOM05D005417 ORTHO05D002591 9.1e-26 122.1 132 54.5
PSO017G4959 Papaver somniferum HOM05D005417 ORTHO05D002591 1.2e-25 121.7 143 50.3
PSO063G3464 Papaver somniferum HOM05D005417 ORTHO05D002591 1.5e-25 121.3 143 52.4
PGSC0003DMG400020102 Solanum tuberosum HOM05D005417 ORTHO05D002591 2.0e-25 120.9 121 52.9
CARHR101450 Cardamine hirsuta HOM05D005417 ORTHO05D002591 2.6e-25 120.6 137 51.8
Solyc06g083330.2 Solanum lycopersicum HOM05D005417 ORTHO05D002591 2.6e-25 120.6 121 53.7
MBI07_g27364_MAGBIO Magnolia biondii HOM05D005417 ORTHO05D002591 3.4e-25 120.2 121 60.3
Nn3g20048 Nelumbo nucifera HOM05D005417 ORTHO05D002591 7.7e-25 119.0 153 49.7
Nn3g20049 Nelumbo nucifera HOM05D005417 ORTHO05D002591 7.7e-25 119.0 153 49.7
SalBow5G5435 Salvia bowleyana HOM05D005417 ORTHO05D002591 1.1e-23 115.2 240 37.1
Sopen06g034710 Solanum pennellii HOM05D005417 ORTHO05D002591 1.4e-23 114.8 121 51.2
SGA_v2.0_scaffold3G01638 Striga asiatica HOM05D005417 ORTHO05D002591 1.9e-23 114.4 133 51.1
Peaxi162Scf01312g00003 Petunia axillaris HOM05D005417 ORTHO05D002591 3.2e-23 113.6 128 53.1
PGR044G1095 Punica granatum HOM05D005417 ORTHO05D002591 9.4e-23 112.1 152 48.0
HPP92_009946 Vanilla planifolia HOM05D005417 ORTHO05D002591 1.6e-22 111.3 134 47.8
EL10Ac7g17913 Beta vulgaris HOM05D005417 ORTHO05D002591 3.6e-22 110.2 224 42.0
THA.LOC104804626 Tarenaya hassleriana HOM05D005417 ORTHO05D002591 6.1e-22 109.4 184 44.6
unitig_899.g15407 Utricularia gibba HOM05D005417 ORTHO05D002591 5.2e-21 106.3 135 50.4
Gohir.A07G161200 Gossypium hirsutum HOM05D005417 ORTHO05D002591 1.5e-20 104.8 228 39.9
Gorai.001G188400 Gossypium raimondii HOM05D005417 ORTHO05D002591 2.0e-20 104.4 371 34.5
ATR0561G108 Amborella trichopoda HOM05D005417 ORTHO05D002591 2.8e-19 100.5 171 43.3
unitig_749.g13592 Utricularia gibba HOM05D005417 ORTHO05D002591 1.4e-18 98.2 155 41.9
TPR.G976 Trifolium pratense HOM05D005417 ORTHO05D002591 6.1e-14 82.8 87 56.3
TPR.G6388 Trifolium pratense HOM05D005417 ORTHO05D002591 5.7e-12 76.3 63 58.7
Haze_03369 Corylus avellana HOM05D005417 ORTHO05D002591 3.7e-11 73.6 285 34.7
AUR62016544 Chenopodium quinoa HOM05D005417 ORTHO05D002591 1.4e-10 71.6 60 61.7
CDE05G3071 Ceratophyllum demersum HOM05D000186 ORTHO05D002329 1.8e-10 71.2 139 33.8
Lj5g0025661 Lotus japonicus HOM05D005417 ORTHO05D002591 3.1e-10 70.5 142 40.1
Zm00001eb090480 Zea mays HOM05D005417 ORTHO05D002591 3.1e-10 70.5 155 36.8
Os11g0458100 Oryza sativa ssp. japonica HOM05D005417 ORTHO05D002591 6.5e-08 62.8 150 37.3
MELO3C021078.2 Cucumis melo HOM05D005417 ORTHO05D002591 9.4e-07 58.9 170 36.5
Gohir.D07G164700 Gossypium hirsutum HOM05D005417 ORTHO05D002591 1.6e-06 58.2 340 34.1
AUR62001135 Chenopodium quinoa HOM05D005417 ORTHO05D002591 2.7e-06 57.4 39 71.8
DCAR_004692 Daucus carota HOM05D005417 ORTHO05D002591 8.0e-06 55.8 112 33.9


User provided reference genes

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