Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold154G37171 Striga asiatica HOM05D000475 ORTHO05D000343 2.6e-65 251.9 127 100.0
SGA_v2.0_scaffold47G17595 Striga asiatica HOM05D000475 ORTHO05D000343 7.6e-25 117.5 132 53.8
MSTRG.24095 Avicennia marina HOM05D000475 ORTHO05D000343 1.4e-13 80.1 143 39.2
Migut.F00065 Erythranthe guttata HOM05D000475 ORTHO05D000343 1.8e-13 79.7 142 40.1
Oeu011747.1 Olea europaea HOM05D000475 ORTHO05D000343 1.8e-13 79.7 144 38.9
CSS0011365 Camellia sinensis var. sinensis HOM05D000475 ORTHO05D000343 2.3e-13 79.3 130 38.5
CSS0035498 Camellia sinensis var. sinensis HOM05D000475 ORTHO05D000343 2.3e-13 79.3 140 37.1
Dinv25660 Davidia involucrata HOM05D000475 ORTHO05D000343 2.3e-13 79.3 142 41.5
SGA_v2.0_scaffold253G45196 Striga asiatica HOM05D000475 ORTHO05D000343 2.3e-13 79.3 129 42.6
SGA_v2.0_scaffold44G16912 Striga asiatica HOM05D000475 ORTHO05D000343 5.1e-13 78.2 140 40.0
Cc07_g00820 Coffea canephora HOM05D000475 ORTHO05D000343 6.7e-13 77.8 138 39.9
vmacro05956 Vaccinium macrocarpon HOM05D000475 ORTHO05D000343 1.9e-12 76.3 138 38.4
CAN.G1300.3 Capsicum annuum HOM05D000475 ORTHO05D000343 9.7e-12 73.9 141 39.0
Dinv33338 Davidia involucrata HOM05D000475 ORTHO05D000343 1.3e-11 73.6 121 41.3
Manes.15G160800 Manihot esculenta HOM05D000475 ORTHO05D000343 4.8e-11 71.6 144 36.8
Hma1.2p1_1057F.1_g252850 Hydrangea macrophylla HOM05D000475 ORTHO05D000343 6.3e-11 71.2 125 37.6
Sc07g0003970 Simmondsia chinensis HOM05D000475 ORTHO05D000343 6.3e-11 71.2 135 36.3
Actinidia36202 Actinidia chinensis HOM05D000475 ORTHO05D000343 1.4e-10 70.1 140 35.7
SalBow7G3560 Salvia bowleyana HOM05D000475 ORTHO05D000343 1.4e-10 70.1 141 34.0
Cfa007229 Carpinus fangiana HOM05D000475 ORTHO05D000343 1.8e-10 69.7 112 43.8
Lju41C52T21 Lonicera japonica HOM05D000475 ORTHO05D000343 1.8e-10 69.7 146 34.9
PGSC0003DMG400006977 Solanum tuberosum HOM05D000475 ORTHO05D000343 1.8e-10 69.7 148 37.8
Ah.02g120570 Amaranthus hybridus HOM05D000475 ORTHO05D000343 5.3e-10 68.2 137 37.2
Oeu035223.1 Olea europaea HOM05D000475 ORTHO05D000343 5.3e-10 68.2 138 37.0
Eucgr.J02349 Eucalyptus grandis HOM05D000475 ORTHO05D000343 6.9e-10 67.8 140 36.4
Gohir.A11G064400 Gossypium hirsutum HOM05D000475 ORTHO05D000343 6.9e-10 67.8 156 35.9
Duzib187G1559 Durio zibethinus HOM05D000475 ORTHO05D000343 1.2e-09 67.0 145 36.6
Actinidia05906 Actinidia chinensis HOM05D000475 ORTHO05D000343 1.5e-09 66.6 141 34.8
Duzib264G0063 Durio zibethinus HOM05D000475 ORTHO05D000343 1.5e-09 66.6 145 35.9
FAN02G2086 Fragaria x ananassa HOM05D000475 ORTHO05D000343 1.5e-09 66.6 140 36.4
FAN02G2592 Fragaria x ananassa HOM05D000475 ORTHO05D000343 1.5e-09 66.6 140 36.4
FAN14G2626 Fragaria x ananassa HOM05D000475 ORTHO05D000343 1.5e-09 66.6 140 36.4
Gohir.A05G338700 Gossypium hirsutum HOM05D000475 ORTHO05D000343 1.5e-09 66.6 144 36.1
CSS0036607 Camellia sinensis var. sinensis HOM05D000475 ORTHO05D000343 2.0e-09 66.2 158 34.8
CSS0039214 Camellia sinensis var. sinensis HOM05D000475 ORTHO05D000343 2.0e-09 66.2 158 34.8
DCAR_011308 Daucus carota HOM05D000475 ORTHO05D000343 2.0e-09 66.2 137 35.8
Nitab4.5_0008640g0030 Nicotiana tabacum HOM05D000475 ORTHO05D000343 2.0e-09 66.2 141 37.6
Potri.001G330300 Populus trichocarpa HOM05D000475 ORTHO05D000343 2.0e-09 66.2 141 36.9
Sed0003099 Sechium edule HOM05D000475 ORTHO05D000343 2.0e-09 66.2 148 35.1
Peaxi162Scf00700g00002 Petunia axillaris HOM05D000475 ORTHO05D000343 2.6e-09 65.9 140 39.3
RcHm_v2.0_Chr2g0175541 Rosa chinensis HOM05D000475 ORTHO05D000343 2.6e-09 65.9 141 36.2
MSTRG.3077 Avicennia marina HOM05D000475 ORTHO05D000343 4.5e-09 65.1 144 34.7
FAN09G3268 Fragaria x ananassa HOM05D000475 ORTHO05D000343 4.5e-09 65.1 138 36.2
Gohir.D04G077000 Gossypium hirsutum HOM05D000475 ORTHO05D000343 4.5e-09 65.1 146 34.9
Nitab4.5_0000559g0410 Nicotiana tabacum HOM05D000475 ORTHO05D000343 4.5e-09 65.1 119 38.7
Peaxi162Scf00420g00553 Petunia axillaris HOM05D000475 ORTHO05D000343 5.9e-09 64.7 141 35.5
FvH4_6g53510 Fragaria vesca HOM05D000475 ORTHO05D000343 7.7e-09 64.3 140 35.7
arahy.Tifrunner.gnm1.ann1.SKI1QK Arachis hypogaea HOM05D000475 ORTHO05D000343 1.0e-08 63.9 142 36.6
Cpa.g.sc171.17 Carica papaya HOM05D000475 ORTHO05D000343 1.0e-08 63.9 147 35.4
Ca_27121_v3 Cicer arietinum L. HOM05D000475 ORTHO05D000343 1.0e-08 63.9 139 38.1
Prupe.3G306100 Prunus persica HOM05D000475 ORTHO05D000343 1.0e-08 63.9 130 36.2
Sabra16G0211600 Salix brachista HOM05D000475 ORTHO05D000343 1.0e-08 63.9 140 36.4
arahy.Tifrunner.gnm1.ann1.7GY2ZZ Arachis hypogaea HOM05D000475 ORTHO05D000343 1.3e-08 63.5 143 36.4
CiPaw.04G036500 Carya illinoinensis HOM05D000475 ORTHO05D000343 1.3e-08 63.5 129 36.4
Haze_14874 Corylus avellana HOM05D000475 ORTHO05D000343 1.3e-08 63.5 143 35.7
FAN05G0007 Fragaria x ananassa HOM05D000475 ORTHO05D000343 1.3e-08 63.5 142 35.2
FAN05G2551 Fragaria x ananassa HOM05D000475 ORTHO05D000343 1.3e-08 63.5 142 35.2
CiPaw.03G055400 Carya illinoinensis HOM05D000475 ORTHO05D000343 1.7e-08 63.2 134 36.6
AUR62017825 Chenopodium quinoa HOM05D000475 ORTHO05D000343 1.7e-08 63.2 111 39.6
DCAR_021793 Daucus carota HOM05D000475 ORTHO05D000343 1.7e-08 63.2 142 34.5
Medtr7g029130 Medicago truncatula HOM05D000475 ORTHO05D000343 1.7e-08 63.2 142 37.3
COL.COLO4_13259 Corchorus olitorius HOM05D000475 ORTHO05D000343 2.2e-08 62.8 145 35.9
Psat3g172280 Pisum sativum HOM05D000475 ORTHO05D000343 2.2e-08 62.8 139 37.4
AUR62003513 Chenopodium quinoa HOM05D000475 ORTHO05D000343 2.9e-08 62.4 110 38.2
Atru.chr6.2568 Acer truncatum HOM05D000475 ORTHO05D000343 3.8e-08 62.0 121 37.2
Gorai.007G073500 Gossypium raimondii HOM05D000475 ORTHO05D000343 5.0e-08 61.6 156 34.0
Gorai.012G086900 Gossypium raimondii HOM05D000475 ORTHO05D000343 6.5e-08 61.2 144 34.0
Gorai.001G271300 Gossypium raimondii HOM05D000475 ORTHO05D000343 8.5e-08 60.8 147 33.3
MELO3C014883.2 Cucumis melo HOM05D000475 ORTHO05D000343 1.1e-07 60.5 151 31.1
Thecc.04G035800 Theobroma cacao HOM05D000475 ORTHO05D000343 1.1e-07 60.5 145 34.5
CsaV3_3G027020 Cucumis sativus L. HOM05D000475 ORTHO05D000343 1.4e-07 60.1 151 31.1
Gohir.A07G228300 Gossypium hirsutum HOM05D000475 ORTHO05D000343 1.4e-07 60.1 147 34.7
Sp6g29860 Schrenkiella parvula HOM05D000475 ORTHO05D000343 1.4e-07 60.1 125 36.0
SpUn0049_0060 Schrenkiella parvula HOM05D000475 ORTHO05D000343 1.4e-07 60.1 125 36.0
Solyc02g094130.3 Solanum lycopersicum HOM05D000475 ORTHO05D000343 1.4e-07 60.1 140 32.9
Sopen02g038760 Solanum pennellii HOM05D000475 ORTHO05D000343 1.4e-07 60.1 140 34.3
PGSC0003DMG400020211 Solanum tuberosum HOM05D000475 ORTHO05D000343 1.4e-07 60.1 140 32.9
CAN.G473.98 Capsicum annuum HOM05D000475 ORTHO05D000343 1.9e-07 59.7 147 32.7
Glyma.16G056600 Glycine max HOM05D000475 ORTHO05D000343 1.9e-07 59.7 138 35.5
Gohir.D11G068700 Gossypium hirsutum HOM05D000475 ORTHO05D000343 1.9e-07 59.7 156 33.3
Lj1g0001677 Lotus japonicus HOM05D000475 ORTHO05D000343 2.5e-07 59.3 141 34.8
Potri.017G069100 Populus trichocarpa HOM05D000475 ORTHO05D000343 2.5e-07 59.3 140 33.6
Nitab4.5_0003376g0060 Nicotiana tabacum HOM05D000475 ORTHO05D000343 3.2e-07 58.9 137 36.5
TPR.G40012 Trifolium pratense HOM05D000475 ORTHO05D000343 4.2e-07 58.5 143 35.7
TAR622G0304 Trochodendron aralioides HOM05D000475 ORTHO05D000343 4.2e-07 58.5 149 30.9
Aqoxy3G00801 Aquilegia oxysepala HOM05D000475 ORTHO05D000343 7.2e-07 57.8 142 33.1
vmacro18343 Vaccinium macrocarpon HOM05D000475 ORTHO05D000343 7.2e-07 57.8 131 35.9
Duzib147G0237 Durio zibethinus HOM05D000475 ORTHO05D000343 9.4e-07 57.4 146 33.6
Nn3g16470 Nelumbo nucifera HOM05D000475 ORTHO05D000343 9.4e-07 57.4 147 32.7
ClCG05G013500 Citrullus lanatus HOM05D000475 ORTHO05D000343 1.2e-06 57.0 151 31.8
TAR374G1304 Trochodendron aralioides HOM05D000475 ORTHO05D000343 1.2e-06 57.0 143 33.6
Gohir.D07G235500 Gossypium hirsutum HOM05D000475 ORTHO05D000343 1.6e-06 56.6 147 34.0
MD00G1139300 Malus domestica HOM05D000475 ORTHO05D000343 1.6e-06 56.6 132 35.6
Nitab4.5_0002050g0100 Nicotiana tabacum HOM05D000475 ORTHO05D000343 1.6e-06 56.6 140 31.4
VMungo1383G0206 Vigna mungo HOM05D000475 ORTHO05D000343 1.6e-06 56.6 143 33.6
Lalb_Chr14g0363421 Lupinus albus HOM05D000475 ORTHO05D000343 2.1e-06 56.2 142 31.0
Phvul.001G093700 Phaseolus vulgaris HOM05D000475 ORTHO05D000343 2.1e-06 56.2 142 33.8
Hund04343 Selenicereus undatus HOM05D000475 ORTHO05D000343 2.1e-06 56.2 140 32.9
Sopen02g017230 Solanum pennellii HOM05D000475 ORTHO05D000343 2.1e-06 56.2 147 34.0
Aqoxy2G02222 Aquilegia oxysepala HOM05D000475 ORTHO05D000343 2.7e-06 55.8 137 34.3
Nitab4.5_0011569g0030 Nicotiana tabacum HOM05D000475 ORTHO05D000343 3.6e-06 55.5 140 32.9
Solyc02g068120.3 Solanum lycopersicum HOM05D000475 ORTHO05D000343 3.6e-06 55.5 147 34.0
MD09G1011000 Malus domestica HOM05D000475 ORTHO05D000343 4.7e-06 55.1 134 35.8
QL02p071456 Quercus lobata HOM05D000475 ORTHO05D000343 7.9e-06 54.3 152 31.6


User provided reference genes

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