Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold154G37132 Striga asiatica HOM05D005599 ORTHO05D006921 2.7e-67 258.5 123 100.0
SGA_v2.0_scaffold181G39695 Striga asiatica HOM05D005599 ORTHO05D006921 6.0e-67 257.3 123 99.2
SGA_v2.0_scaffold6G03128 Striga asiatica HOM05D005599 ORTHO05D006921 1.5e-57 226.1 124 90.3
PGSC0003DMG400005984 Solanum tuberosum HOM05D005599 ORTHO05D006921 2.8e-56 221.9 122 80.3
Solyc04g007700.3 Solanum lycopersicum HOM05D005599 ORTHO05D006921 4.7e-56 221.1 122 80.3
Sopen04g002790 Solanum pennellii HOM05D005599 ORTHO05D006921 4.7e-56 221.1 122 80.3
CAN.G1244.3 Capsicum annuum HOM05D005599 ORTHO05D006921 1.8e-55 219.2 122 80.3
Rhsim09G0066400 Rhododendron simsii HOM05D005599 ORTHO05D006921 1.8e-55 219.2 122 82.8
Cc11_g08600 Coffea canephora HOM05D005599 ORTHO05D006921 2.4e-55 218.8 120 82.5
Nitab4.5_0000426g0280 Nicotiana tabacum HOM05D005599 ORTHO05D006921 9.0e-55 216.9 122 79.5
Nitab4.5_0004230g0050 Nicotiana tabacum HOM05D005599 ORTHO05D006921 9.0e-55 216.9 122 79.5
vmacro14440 Vaccinium macrocarpon HOM05D005599 ORTHO05D006921 5.8e-54 214.2 122 81.1
Peaxi162Scf00253g01125 Petunia axillaris HOM05D005599 ORTHO05D006921 7.6e-54 213.8 122 82.0
QL01p001565 Quercus lobata HOM05D005599 ORTHO05D006921 1.7e-53 212.6 120 81.7
GSVIVG01011752001 Vitis vinifera HOM05D005599 ORTHO05D006921 3.8e-53 211.5 120 80.0
MSTRG.6631 Avicennia marina HOM05D005599 ORTHO05D006921 4.9e-53 211.1 122 78.7
FAN05G3069 Fragaria x ananassa HOM05D005599 ORTHO05D006921 6.4e-53 210.7 122 77.9
FAN12G4015 Fragaria x ananassa HOM05D005599 ORTHO05D006921 6.4e-53 210.7 122 77.9
FAN25G3147 Fragaria x ananassa HOM05D005599 ORTHO05D006921 6.4e-53 210.7 122 77.9
RcHm_v2.0_Chr4g0425701 Rosa chinensis HOM05D005599 ORTHO05D006921 6.4e-53 210.7 122 77.9
CiPaw.06G011400 Carya illinoinensis HOM05D005599 ORTHO05D006921 1.4e-52 209.5 120 79.2
AUR62032768 Chenopodium quinoa HOM05D005599 ORTHO05D006921 1.4e-52 209.5 122 79.5
Thecc.02G282300 Theobroma cacao HOM05D005599 ORTHO05D006921 1.9e-52 209.1 122 77.9
FAN07G1516 Fragaria x ananassa HOM05D005599 ORTHO05D006921 4.2e-52 208.0 122 77.0
COL.COLO4_20491 Corchorus olitorius HOM05D005599 ORTHO05D006921 5.4e-52 207.6 122 77.9
Duzib251G0393 Durio zibethinus HOM05D005599 ORTHO05D006921 5.4e-52 207.6 122 77.0
unitig_899.g15269 Utricularia gibba HOM05D005599 ORTHO05D006921 7.1e-52 207.2 118 78.0
Hma1.2p1_0096F.1_g047800 Hydrangea macrophylla HOM05D005599 ORTHO05D006921 1.2e-51 206.5 120 78.3
Manes.15G128100 Manihot esculenta HOM05D005599 ORTHO05D006921 1.6e-51 206.1 119 79.0
Hund09673 Selenicereus undatus HOM05D005599 ORTHO05D006921 1.6e-51 206.1 119 79.0
EL10Ac9g21851 Beta vulgaris HOM05D005599 ORTHO05D006921 2.1e-51 205.7 122 77.9
Gohir.A03G120800 Gossypium hirsutum HOM05D005599 ORTHO05D006921 2.7e-51 205.3 122 76.2
Dinv14427 Davidia involucrata HOM05D005599 ORTHO05D006921 4.6e-51 204.5 120 77.5
Ah.04g163140 Amaranthus hybridus HOM05D005599 ORTHO05D006921 6.0e-51 204.1 119 79.0
FvH4_4g19980 Fragaria vesca HOM05D005599 ORTHO05D006921 6.0e-51 204.1 122 77.0
Lj6g0000510 Lotus japonicus HOM05D005599 ORTHO05D006921 7.8e-51 203.8 120 76.7
Prupe.1G325600 Prunus persica HOM05D005599 ORTHO05D006921 7.8e-51 203.8 122 76.2
Sed0017153 Sechium edule HOM05D005599 ORTHO05D006921 1.3e-50 203.0 122 76.2
Atru.chr11.497 Acer truncatum HOM05D005599 ORTHO05D006921 1.7e-50 202.6 122 73.0
Glyma.19G089600 Glycine max HOM05D005599 ORTHO05D006921 1.7e-50 202.6 122 77.0
Potri.008G129900 Populus trichocarpa HOM05D005599 ORTHO05D006921 1.7e-50 202.6 122 75.4
Gohir.D02G144100 Gossypium hirsutum HOM05D005599 ORTHO05D006921 2.3e-50 202.2 122 75.4
Cfa008617 Carpinus fangiana HOM05D005599 ORTHO05D006921 3.0e-50 201.8 122 74.6
HanXRQChr08g0212121 Helianthus annuus HOM05D005599 ORTHO05D006921 3.0e-50 201.8 122 77.0
Glyma.16G057902 Glycine max HOM05D005599 ORTHO05D006921 3.9e-50 201.4 120 76.7
ECA236G1659 Erigeron canadensis HOM05D005599 ORTHO05D006921 5.1e-50 201.1 122 76.2
Sc14g0007100 Simmondsia chinensis HOM05D005599 ORTHO05D006921 5.1e-50 201.1 120 76.7
TWI79G1349 Tripterygium wilfordii HOM05D005599 ORTHO05D006921 5.1e-50 201.1 122 77.0
MBI16_g23758_MAGBIO Magnolia biondii HOM05D005599 ORTHO05D006921 6.6e-50 200.7 119 75.6
HanXRQChr12g0364441 Helianthus annuus HOM05D005599 ORTHO05D006921 1.1e-49 199.9 122 75.4
Phvul.001G094900 Phaseolus vulgaris HOM05D005599 ORTHO05D006921 1.5e-49 199.5 120 76.7
THA.LOC104823847 Tarenaya hassleriana HOM05D005599 ORTHO05D006921 1.9e-49 199.1 119 76.5
Lsat_1_v5_gn_9_79661 Lactuca sativa HOM05D005599 ORTHO05D006921 2.5e-49 198.7 119 75.6
MD16G1027400 Malus domestica HOM05D005599 ORTHO05D006921 2.5e-49 198.7 119 75.6
DCAR_023596 Daucus carota HOM05D005599 ORTHO05D006921 3.3e-49 198.4 120 70.8
TAR622G1178 Trochodendron aralioides HOM05D005599 ORTHO05D006921 3.3e-49 198.4 120 73.3
Ca_21512_v3 Cicer arietinum L. HOM05D005599 ORTHO05D006921 4.3e-49 198.0 120 75.8
ATR0796G095 Amborella trichopoda HOM05D005599 ORTHO05D006921 5.6e-49 197.6 119 76.5
MD13G1024900 Malus domestica HOM05D005599 ORTHO05D006921 5.6e-49 197.6 119 74.8
PGR004G1422 Punica granatum HOM05D005599 ORTHO05D006921 5.6e-49 197.6 122 73.0
ClCG07G006660 Citrullus lanatus HOM05D005599 ORTHO05D006921 9.6e-49 196.8 120 75.0
Ciclev10017195m.g Citrus clementina HOM05D005599 ORTHO05D006921 1.6e-48 196.1 119 73.9
RcHm_v2.0_Chr4g0441361 Rosa chinensis HOM05D005599 ORTHO05D006921 1.6e-48 196.1 128 71.1
CsaV3_5G013870 Cucumis sativus L. HOM05D005599 ORTHO05D006921 2.1e-48 195.7 120 74.2
Potri.010G112300 Populus trichocarpa HOM05D005599 ORTHO05D006921 2.8e-48 195.3 119 74.8
VMungo0464G0261 Vigna mungo HOM05D005599 ORTHO05D006921 4.8e-48 194.5 120 75.8
Oeu003383.1 Olea europaea HOM05D005599 ORTHO05D006921 8.1e-48 193.7 107 79.4
AL1G27050 Arabidopsis lyrata HOM05D005599 ORTHO05D006921 1.1e-47 193.4 119 73.1
Lalb_Chr08g0237401 Lupinus albus HOM05D005599 ORTHO05D006921 1.1e-47 193.4 120 73.3
Zm00001eb161570 Zea mays HOM05D005599 ORTHO05D006921 1.4e-47 193.0 113 76.1
Aqoxy3G01068 Aquilegia oxysepala HOM05D005599 ORTHO05D006921 1.8e-47 192.6 119 72.3
CDE07G0704 Ceratophyllum demersum HOM05D005599 ORTHO05D006921 1.8e-47 192.6 122 71.3
Eucgr.B01298 Eucalyptus grandis HOM05D005599 ORTHO05D006921 1.8e-47 192.6 119 72.3
MELO3C018308.2 Cucumis melo HOM05D005599 ORTHO05D006921 2.4e-47 192.2 120 73.3
DCAR_026778 Daucus carota HOM05D005599 ORTHO05D006921 2.4e-47 192.2 119 70.6
Os01g0606050 Oryza sativa ssp. japonica HOM05D005599 ORTHO05D006921 2.4e-47 192.2 113 77.0
Aa31LG2G8490 Aethionema arabicum HOM05D005599 ORTHO05D006921 3.1e-47 191.8 122 71.3
BcaB02g06563 Brassica carinata HOM05D005599 ORTHO05D006921 4.0e-47 191.4 119 74.8
Carub.0001s1476 Capsella rubella HOM05D005599 ORTHO05D006921 4.0e-47 191.4 119 73.9
Sp1g13380 Schrenkiella parvula HOM05D005599 ORTHO05D006921 4.0e-47 191.4 113 76.1
AT1G14990 Arabidopsis thaliana HOM05D005599 ORTHO05D006921 5.3e-47 191.0 119 72.3
PSO170G3715 Papaver somniferum HOM05D005599 ORTHO05D006921 5.3e-47 191.0 119 71.4
Oeu045860.1 Olea europaea HOM05D005599 ORTHO05D006921 1.2e-46 189.9 108 79.6
HPP92_003868 Vanilla planifolia HOM05D005599 ORTHO05D006921 1.2e-46 189.9 120 74.2
HPP92_003899 Vanilla planifolia HOM05D005599 ORTHO05D006921 1.2e-46 189.9 120 74.2
A09p61660 Brassica napus HOM05D005599 ORTHO05D006921 2.0e-46 189.1 119 72.3
CARHR015530 Cardamine hirsuta HOM05D005599 ORTHO05D006921 2.6e-46 188.7 119 70.6
Medtr1g069405 Medicago truncatula HOM05D005599 ORTHO05D006921 2.6e-46 188.7 120 71.7
A06p11010 Brassica napus HOM05D005599 ORTHO05D006921 3.4e-46 188.3 119 73.1
TPR.G19139 Trifolium pratense HOM05D005599 ORTHO05D006921 4.5e-46 188.0 120 71.7
AUR62042684 Chenopodium quinoa HOM05D005599 ORTHO05D006921 9.9e-46 186.8 110 78.2
vmacro00414 Vaccinium macrocarpon HOM05D005599 ORTHO05D006921 9.9e-46 186.8 107 80.4
Migut.M00054 Erythranthe guttata HOM05D005599 ORTHO05D006921 1.3e-45 186.4 122 73.8
Psat6g049960 Pisum sativum HOM05D005599 ORTHO05D006921 2.2e-45 185.7 120 71.7
CANSAT11G1373 Cannabis sativa HOM05D005599 ORTHO05D006921 2.9e-45 185.3 120 69.2
BolC5t30050H Brassica oleracea HOM05D005599 ORTHO05D006921 3.8e-45 184.9 119 71.4
Cpa.g.sc65.146 Carica papaya HOM05D005599 ORTHO05D006921 8.4e-45 183.7 104 79.8
Dinv07654 Davidia involucrata HOM05D005599 ORTHO05D006921 1.9e-44 182.6 103 77.7
BolC8t52072H Brassica oleracea HOM05D005599 ORTHO05D006921 2.4e-44 182.2 132 65.9
Haze_10995 Corylus avellana HOM05D005599 ORTHO05D006921 7.1e-44 180.6 111 73.0
Gorai.005G161400 Gossypium raimondii HOM05D005599 ORTHO05D006921 1.2e-43 179.9 107 75.7
BraA09t41538Z Brassica rapa HOM05D005599 ORTHO05D006921 1.6e-43 179.5 137 63.5
arahy.Tifrunner.gnm1.ann1.UU8CC3 Arachis hypogaea HOM05D005599 ORTHO05D006921 2.1e-43 179.1 107 75.7
Sabra08G0098500 Salix brachista HOM05D005599 ORTHO05D006921 2.1e-43 179.1 107 75.7
CSS0007655 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 3.5e-43 178.3 105 78.1
CSS0037826 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 3.5e-43 178.3 105 78.1
arahy.Tifrunner.gnm1.ann1.5FG4B2 Arachis hypogaea HOM05D005599 ORTHO05D006921 6.0e-43 177.6 105 76.2
CSS0001207 Camellia sinensis var. sinensis HOM05D005599 ORTHO05D006921 2.3e-42 175.6 104 74.0
arahy.Tifrunner.gnm1.ann1.5G098T Arachis hypogaea HOM05D005599 ORTHO05D006921 3.0e-42 175.3 104 76.0
Sabra10G0082600 Salix brachista HOM05D005599 ORTHO05D006921 3.3e-41 171.8 104 75.0
Aqoxy1G03319 Aquilegia oxysepala HOM05D005599 ORTHO05D006921 1.6e-40 169.5 104 71.2
C05p13060 Brassica napus HOM05D005599 ORTHO05D006921 2.1e-40 169.1 127 63.8
PSO782G0484 Papaver somniferum HOM05D005599 ORTHO05D006921 1.4e-39 166.4 105 69.5
Thhalv10009435m.g Eutrema salsugineum HOM05D005599 ORTHO05D006921 1.8e-39 166.0 104 71.2
SEGI_33740 Sequoiadendron giganteum HOM05D005599 ORTHO05D006921 3.1e-39 165.2 114 65.8
Sed0011013 Sechium edule HOM05D005599 ORTHO05D006921 1.2e-38 163.3 98 75.5
BraA06t24281Z Brassica rapa HOM05D005599 ORTHO05D006921 2.6e-38 162.2 111 67.6
C08p45240 Brassica napus HOM05D005599 ORTHO05D006921 3.4e-38 161.8 104 70.2
AUR62014127 Chenopodium quinoa HOM05D005599 ORTHO05D006921 1.6e-35 152.9 84 83.3
BcaC07g38244 Brassica carinata HOM05D005599 ORTHO05D006921 4.6e-35 151.4 104 68.3
C08p09930 Brassica napus HOM05D005599 ORTHO05D006921 4.6e-35 151.4 104 68.3
BolC8t48670H Brassica oleracea HOM05D005599 ORTHO05D006921 4.6e-35 151.4 104 68.3
SGA_v2.0_scaffold2G00929 Striga asiatica HOM05D005599 ORTHO05D006921 1.3e-29 133.3 66 90.9
Eucgr.E01608 Eucalyptus grandis HOM05D005599 ORTHO05D006921 2.2e-29 132.5 105 60.0
Pp3c16_10100 Physcomitrium patens HOM05D005599 ORTHO05D006921 1.9e-28 129.4 111 50.5
BcaC05g25431 Brassica carinata HOM05D005599 ORTHO05D006921 1.8e-26 122.9 119 51.3
Eucgr.B02904 Eucalyptus grandis HOM05D005599 ORTHO05D006921 1.1e-25 120.2 93 58.1
arahy.Tifrunner.gnm1.ann1.XM49AS Arachis hypogaea HOM05D005599 ORTHO05D006921 1.9e-25 119.4 65 80.0
Mapoly0035s0140 Marchantia polymorpha HOM05D005599 ORTHO05D006921 1.1e-23 113.6 109 46.8
MBI16_g23757_MAGBIO Magnolia biondii HOM05D005599 ORTHO05D006921 1.6e-19 99.8 66 66.7
MBI16_g23756_MAGBIO Magnolia biondii HOM05D000079 ORTHO05D016475 1.8e-18 96.3 67 62.7
Nn4g24251 Nelumbo nucifera HOM05D005599 ORTHO05D006921 8.8e-18 94.0 57 73.7
SGA_v2.0_scaffold135G34854 Striga asiatica HOM05D005599 ORTHO05D006921 2.4e-15 85.9 44 81.8
CBR_g40805 Chara braunii HOM05D005599 ORTHO05D006921 3.4e-14 82.0 54 61.1
DCAR_032107 Daucus carota HOM05D005599 ORTHO05D006921 5.0e-13 78.2 50 58.0
QL08p008929 Quercus lobata HOM05D005599 ORTHO05D006921 6.3e-08 61.2 41 70.7


User provided reference genes

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