Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold154G37082 Striga asiatica HOM05D006813 ORTHO05D008657 1.6e-233 812.4 403 100.0
SalBow1G5727 Salvia bowleyana HOM05D006813 ORTHO05D008657 1.2e-159 567.0 409 70.9
Migut.K01297 Erythranthe guttata HOM05D006813 ORTHO05D008657 2.2e-158 562.8 428 68.5
MSTRG.3341 Avicennia marina HOM05D006813 ORTHO05D008657 1.4e-157 560.1 415 70.6
Nitab4.5_0000568g0240 Nicotiana tabacum HOM05D006813 ORTHO05D008657 4.1e-141 505.4 372 67.2
CSS0034099 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 5.4e-141 505.0 379 67.8
CAN.G206.184 Capsicum annuum HOM05D006813 ORTHO05D008657 1.2e-140 503.8 407 64.1
Nitab4.5_0001591g0010 Nicotiana tabacum HOM05D006813 ORTHO05D008657 1.6e-140 503.4 414 63.8
CSS0013443 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 4.6e-140 501.9 399 63.9
TAR371G1040 Trochodendron aralioides HOM05D006813 ORTHO05D008657 6.6e-139 498.0 404 63.9
Manes.02G049900 Manihot esculenta HOM05D006813 ORTHO05D008657 5.6e-138 495.0 362 68.5
EL10Ac2g03036 Beta vulgaris HOM05D006813 ORTHO05D008657 1.2e-137 493.8 361 68.1
Sp2g17800 Schrenkiella parvula HOM05D006813 ORTHO05D008657 3.6e-137 492.3 369 65.6
Solyc02g088350.4 Solanum lycopersicum HOM05D006813 ORTHO05D008657 3.6e-137 492.3 410 62.7
Cc07_g03730 Coffea canephora HOM05D006813 ORTHO05D008657 1.1e-136 490.7 413 61.5
Potri.004G120900 Populus trichocarpa HOM05D006813 ORTHO05D008657 1.1e-136 490.7 369 67.5
Actinidia06110 Actinidia chinensis HOM05D006813 ORTHO05D008657 1.8e-136 490.0 378 65.9
PGSC0003DMG400001435 Solanum tuberosum HOM05D006813 ORTHO05D008657 2.3e-136 489.6 410 62.2
A06p40070 Brassica napus HOM05D006813 ORTHO05D008657 3.1e-136 489.2 390 63.6
BraA06t26922Z Brassica rapa HOM05D006813 ORTHO05D008657 3.1e-136 489.2 390 63.6
Sc14g0006120 Simmondsia chinensis HOM05D006813 ORTHO05D008657 3.1e-136 489.2 394 61.2
Sopen02g033040 Solanum pennellii HOM05D006813 ORTHO05D008657 3.1e-136 489.2 411 62.0
AT3G29185 Arabidopsis thaliana HOM05D006813 ORTHO05D008657 8.9e-136 487.6 380 63.9
BcaC06g33677 Brassica carinata HOM05D006813 ORTHO05D008657 2.6e-135 486.1 391 63.9
C07p38090 Brassica napus HOM05D006813 ORTHO05D008657 2.6e-135 486.1 389 64.3
BolC7t44331H Brassica oleracea HOM05D006813 ORTHO05D008657 2.6e-135 486.1 389 64.3
TWI34G0213 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 2.6e-135 486.1 358 66.8
AL5G19100 Arabidopsis lyrata HOM05D006813 ORTHO05D008657 5.8e-135 485.0 379 63.3
BcaC06g30887 Brassica carinata HOM05D006813 ORTHO05D008657 5.8e-135 485.0 363 66.1
MD09G1056700 Malus domestica HOM05D006813 ORTHO05D008657 7.5e-135 484.6 391 63.2
QL02p085115 Quercus lobata HOM05D006813 ORTHO05D008657 7.5e-135 484.6 360 67.5
Sabra04G0067300 Salix brachista HOM05D006813 ORTHO05D008657 1.3e-134 483.8 367 66.5
Cfa007604 Carpinus fangiana HOM05D006813 ORTHO05D008657 2.2e-134 483.0 382 64.4
Haze_14484 Corylus avellana HOM05D006813 ORTHO05D008657 8.3e-134 481.1 382 64.1
TWI34G0739 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 2.4e-133 479.6 359 66.0
CANSAT64G1527 Cannabis sativa HOM05D006813 ORTHO05D008657 9.2e-133 477.6 410 60.5
AUR62034457 Chenopodium quinoa HOM05D006813 ORTHO05D008657 1.2e-132 477.2 370 66.2
PGR004G2573 Punica granatum HOM05D006813 ORTHO05D008657 1.2e-132 477.2 363 66.7
Thhalv10004355m.g Eutrema salsugineum HOM05D006813 ORTHO05D008657 4.6e-132 475.3 396 61.1
Nn4g23302 Nelumbo nucifera HOM05D006813 ORTHO05D008657 7.8e-132 474.6 378 63.5
DCAR_025399 Daucus carota HOM05D006813 ORTHO05D008657 1.0e-131 474.2 407 58.7
FvH4_6g47790 Fragaria vesca HOM05D006813 ORTHO05D008657 1.3e-131 473.8 366 64.5
FAN14G3538 Fragaria x ananassa HOM05D006813 ORTHO05D008657 1.3e-131 473.8 366 64.5
Ciclev10013781m.g Citrus clementina HOM05D006813 ORTHO05D008657 1.1e-130 470.7 412 61.2
Rhsim10G0035200 Rhododendron simsii HOM05D006813 ORTHO05D008657 1.1e-130 470.7 341 66.6
Medtr6g013150 Medicago truncatula HOM05D006813 ORTHO05D008657 1.5e-130 470.3 342 67.0
GSVIVG01011472001 Vitis vinifera HOM05D006813 ORTHO05D008657 1.5e-130 470.3 412 61.4
THA.LOC104805490 Tarenaya hassleriana HOM05D006813 ORTHO05D008657 1.9e-130 469.9 406 61.1
Atru.chr8.345 Acer truncatum HOM05D006813 ORTHO05D008657 3.3e-130 469.2 375 63.7
Lj2g0012161 Lotus japonicus HOM05D006813 ORTHO05D008657 5.6e-130 468.4 346 66.8
RcHm_v2.0_Chr2g0166981 Rosa chinensis HOM05D006813 ORTHO05D008657 5.6e-130 468.4 382 62.6
Actinidia01957 Actinidia chinensis HOM05D006813 ORTHO05D008657 9.5e-130 467.6 378 63.5
Aa31LG2G4040 Aethionema arabicum HOM05D006813 ORTHO05D008657 9.5e-130 467.6 421 58.7
Glyma.19G026800 Glycine max HOM05D006813 ORTHO05D008657 2.8e-129 466.1 358 65.9
VMungo0464G0720 Vigna mungo HOM05D006813 ORTHO05D008657 1.8e-128 463.4 342 67.8
unitig_0.g2631 Utricularia gibba HOM05D004633 ORTHO05D005503 2.3e-128 463.0 407 60.7
MD17G1054200 Malus domestica HOM05D006813 ORTHO05D008657 3.1e-128 462.6 418 59.1
Oeu023718.1 Olea europaea HOM05D006813 ORTHO05D008657 4.0e-128 462.2 368 63.6
Lalb_Chr02g0159111 Lupinus albus HOM05D006813 ORTHO05D008657 5.2e-128 461.8 341 66.6
ECA232G0359 Erigeron canadensis HOM05D006813 ORTHO05D008657 1.2e-127 460.7 421 56.5
Peaxi162Scf00166g00933 Petunia axillaris HOM05D006813 ORTHO05D008657 1.5e-127 460.3 316 70.9
Hund13179 Selenicereus undatus HOM05D006813 ORTHO05D008657 2.0e-127 459.9 379 61.7
PSO063G1088 Papaver somniferum HOM05D006813 ORTHO05D008657 2.6e-127 459.5 376 61.2
Thecc.04G088600 Theobroma cacao HOM05D006813 ORTHO05D008657 3.4e-127 459.1 379 61.2
vmacro05678 Vaccinium macrocarpon HOM05D006813 ORTHO05D008657 3.4e-127 459.1 342 64.9
Glyma.13G060100 Glycine max HOM05D006813 ORTHO05D008657 4.4e-127 458.8 358 65.4
ClCG11G004590 Citrullus lanatus HOM05D006813 ORTHO05D008657 5.8e-127 458.4 388 61.1
arahy.Tifrunner.gnm1.ann1.GGC6H3 Arachis hypogaea HOM05D006813 ORTHO05D008657 9.9e-127 457.6 377 61.3
PSO063G3583 Papaver somniferum HOM05D006813 ORTHO05D008657 1.3e-126 457.2 381 60.9
CiPaw.03G021100 Carya illinoinensis HOM05D006813 ORTHO05D008657 1.7e-126 456.8 390 60.8
MELO3C022015.2 Cucumis melo HOM05D006813 ORTHO05D008657 1.7e-126 456.8 392 60.2
MBI07_g46965_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 2.9e-126 456.1 344 66.0
Phvul.004G032400 Phaseolus vulgaris HOM05D006813 ORTHO05D008657 2.9e-126 456.1 342 66.7
arahy.Tifrunner.gnm1.ann1.DSSH0H Arachis hypogaea HOM05D006813 ORTHO05D008657 3.8e-126 455.7 343 65.0
Duzib264G0095 Durio zibethinus HOM05D006813 ORTHO05D008657 4.9e-126 455.3 381 60.1
Lsat_1_v5_gn_4_170001 Lactuca sativa HOM05D006813 ORTHO05D008657 1.1e-125 454.1 378 59.5
Psat1g069960 Pisum sativum HOM05D006813 ORTHO05D008657 1.4e-125 453.8 379 60.7
Aqoxy3G03517 Aquilegia oxysepala HOM05D006813 ORTHO05D008657 2.4e-125 453.0 338 66.0
HPP92_015887 Vanilla planifolia HOM05D006813 ORTHO05D008657 2.4e-125 453.0 360 62.5
Gohir.A05G369200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 5.4e-125 451.8 368 61.7
ATR0730G176 Amborella trichopoda HOM05D006813 ORTHO05D008657 1.2e-124 450.7 349 64.5
HanXRQChr09g0264041 Helianthus annuus HOM05D006813 ORTHO05D008657 1.2e-124 450.7 394 58.4
CsaV3_5G038340 Cucumis sativus L. HOM05D006813 ORTHO05D008657 2.1e-124 449.9 392 58.9
Gorai.012G051400 Gossypium raimondii HOM05D006813 ORTHO05D008657 1.3e-123 447.2 376 60.6
Gohir.D04G046200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 1.7e-123 446.8 376 60.6
Lju41A8T104 Lonicera japonica HOM05D006813 ORTHO05D008657 3.0e-123 446.0 431 57.3
Dinv33795 Davidia involucrata HOM05D006813 ORTHO05D008657 8.6e-123 444.5 308 71.1
CDE04G0700 Ceratophyllum demersum HOM05D006813 ORTHO05D008657 1.6e-121 440.3 377 58.6
AUR62018125 Chenopodium quinoa HOM05D006813 ORTHO05D008657 1.6e-121 440.3 318 70.1
Os03g0758900 Oryza sativa ssp. japonica HOM05D006813 ORTHO05D008657 5.8e-119 431.8 411 56.0
COL.COLO4_12242 Corchorus olitorius HOM05D006813 ORTHO05D008657 2.7e-116 422.9 316 66.8
CARHR152350 Cardamine hirsuta HOM05D006813 ORTHO05D008657 3.9e-115 419.1 392 57.1
Zm00001eb057930 Zea mays HOM05D006813 ORTHO05D008657 4.3e-114 415.6 343 61.5
SalBow1G0723 Salvia bowleyana HOM05D006813 ORTHO05D008657 4.2e-109 399.1 312 67.3
Zm00001eb214510 Zea mays HOM05D006813 ORTHO05D008657 9.3e-109 397.9 394 53.6
TPR.G26959 Trifolium pratense HOM05D006813 ORTHO05D008657 9.6e-106 387.9 294 66.0
Dinv11496 Davidia involucrata HOM05D006813 ORTHO05D008657 2.9e-102 376.3 306 64.7
Carub.0005s0792 Capsella rubella HOM05D006813 ORTHO05D008657 2.7e-100 369.8 256 69.1
Prupe.3G262000 Prunus persica HOM05D006813 ORTHO05D008657 1.6e-92 344.0 248 67.3
FAN05G4860 Fragaria x ananassa HOM05D006813 ORTHO05D008657 3.5e-92 342.8 315 57.8
SEGI_06128 Sequoiadendron giganteum HOM05D006813 ORTHO05D008657 2.3e-91 340.1 371 46.9
Sed0010301 Sechium edule HOM05D006813 ORTHO05D008657 9.7e-90 334.7 246 65.4
MBI07_g25549_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 1.9e-85 320.5 269 62.8
Ca_04860_v3 Cicer arietinum L. HOM05D006813 ORTHO05D002040 4.7e-76 289.3 364 44.8
Mapoly0015s0143 Marchantia polymorpha HOM05D006813 ORTHO05D008657 1.1e-74 284.6 364 42.0
Haze_14493 Corylus avellana HOM05D006813 ORTHO05D008657 2.2e-73 280.4 207 65.2
Pp3c27_2000 Physcomitrium patens HOM05D006813 ORTHO05D008657 3.7e-73 279.6 354 42.1
SMO347G0068 Selaginella moellendorffii HOM05D006813 ORTHO05D008657 1.8e-59 234.2 371 35.3
HPP92_015898 Vanilla planifolia HOM05D006813 ORTHO05D008657 2.4e-56 223.8 181 58.6
BcaC06g30885 Brassica carinata HOM05D006813 ORTHO05D008657 2.3e-38 164.1 127 59.8
SalBow1G7870 Salvia bowleyana HOM05D006813 ORTHO05D008657 1.6e-36 157.9 95 77.9
AagrBONN_evm.TU.Sc2ySwM_117.3657 Anthoceros agrestis HOM05D006813 ORTHO05D008657 2.2e-33 147.5 189 41.8
TPR.G26199 Trifolium pratense HOM05D006813 ORTHO05D001332 1.7e-30 137.9 99 62.6
MD09G1057100 Malus domestica HOM05D006813 ORTHO05D008657 1.5e-29 134.8 150 50.0
FAN10G0034 Fragaria x ananassa HOM05D004096 ORTHO05D000898 4.3e-29 133.3 159 45.9
HPP92_015897 Vanilla planifolia HOM05D006813 ORTHO05D008657 8.0e-28 129.0 116 60.3
HanXRQChr08g0223741 Helianthus annuus HOM05D006813 ORTHO05D008657 3.2e-16 90.5 88 52.3
ECA247G1425 Erigeron canadensis HOM05D006813 ORTHO05D008657 3.1e-11 73.9 51 60.8
TAR633G2432 Trochodendron aralioides HOM05D006813 ORTHO05D414814 1.3e-09 68.6 93 47.3
Haze_14448 Corylus avellana HOM05D006813 ORTHO05D008657 6.6e-06 56.2 105 39.0


User provided reference genes

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