Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold153G37074 Striga asiatica HOM05D001772 ORTHO05D005958 4.2e-53 211.1 105 100.0
SGA_v2.0_scaffold43G16374 Striga asiatica HOM05D001772 ORTHO05D005958 1.4e-19 99.8 70 72.9
SGA_v2.0_scaffold5G03005 Striga asiatica HOM05D001772 ORTHO05D005958 1.8e-08 62.8 71 47.9
MSTRG.17331 Avicennia marina HOM05D001772 ORTHO05D005958 1.2e-07 60.1 96 36.5
CANSAT56G1036 Cannabis sativa HOM05D001772 ORTHO05D008903 1.2e-07 60.1 74 45.9
CANSAT56G1679 Cannabis sativa HOM05D001772 ORTHO05D008903 2.0e-07 59.3 74 44.6
Duzib138G1424 Durio zibethinus HOM05D001772 ORTHO05D005958 3.5e-07 58.5 107 39.3
Ciclev10020161m.g Citrus clementina HOM05D001772 ORTHO05D005958 4.5e-07 58.2 75 46.7
Lj9A595G54 Lonicera japonica HOM05D001772 ORTHO05D005958 4.5e-07 58.2 77 44.2
COL.COLO4_06308 Corchorus olitorius HOM05D001772 ORTHO05D005958 5.9e-07 57.8 70 44.3
Dinv32568 Davidia involucrata HOM05D001772 ORTHO05D005958 7.7e-07 57.4 74 47.3
Lalb_Chr17g0342481 Lupinus albus HOM05D001772 ORTHO05D005958 7.7e-07 57.4 73 46.6
Manes.01G247500 Manihot esculenta HOM05D001772 ORTHO05D005958 1.7e-06 56.2 76 46.1
Gohir.D08G147000 Gossypium hirsutum HOM05D001772 ORTHO05D005958 2.3e-06 55.8 90 41.1
Gohir.A08G125900 Gossypium hirsutum HOM05D001772 ORTHO05D005958 2.9e-06 55.5 90 38.9
Thecc.01G345000 Theobroma cacao HOM05D001772 ORTHO05D005958 2.9e-06 55.5 76 44.7
Dinv18731 Davidia involucrata HOM05D001772 ORTHO05D008903 6.6e-06 54.3 77 45.5
Duzib133G1484 Durio zibethinus HOM05D001772 ORTHO05D005958 6.6e-06 54.3 76 42.1
Gorai.004G152500 Gossypium raimondii HOM05D001772 ORTHO05D005958 6.6e-06 54.3 90 38.9
Oeu043209.1 Olea europaea HOM05D001772 ORTHO05D005958 6.6e-06 54.3 76 36.8
CiPaw.01G074300 Carya illinoinensis HOM05D001772 ORTHO05D005958 8.6e-06 53.9 76 39.5
Cc02_g39150 Coffea canephora HOM05D001772 ORTHO05D005958 8.6e-06 53.9 80 40.0


User provided reference genes

Program Settings