Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold153G37038 Striga asiatica HOM05D000147 ORTHO05D020553 7.3e-237 823.5 427 100.0
MSTRG.17211 Avicennia marina HOM05D000147 ORTHO05D007841 5.7e-48 196.1 141 74.5
Oeu036608.1 Olea europaea HOM05D000147 ORTHO05D007841 5.3e-46 189.5 143 70.6
Migut.B01655 Erythranthe guttata HOM05D000147 ORTHO05D007841 3.4e-45 186.8 141 72.3
Migut.O00759 Erythranthe guttata HOM05D000147 ORTHO05D007841 8.5e-44 182.2 141 70.9
Sopen01g037950 Solanum pennellii HOM05D000147 ORTHO05D007841 2.7e-42 177.2 143 68.5
PGSC0003DMG401000018 Solanum tuberosum HOM05D000147 ORTHO05D020553 2.7e-42 177.2 144 68.1
Actinidia31433 Actinidia chinensis HOM05D000147 ORTHO05D007841 3.6e-42 176.8 135 71.1
Solyc01g094150.3 Solanum lycopersicum HOM05D000147 ORTHO05D007841 6.1e-42 176.0 143 67.8
Peaxi162Scf00416g00418 Petunia axillaris HOM05D000147 ORTHO05D007841 1.8e-41 174.5 142 68.3
FAN10G0099 Fragaria x ananassa HOM05D000147 ORTHO05D007841 5.1e-41 172.9 143 65.7
FvH4_7g12180 Fragaria vesca HOM05D000147 ORTHO05D007841 1.5e-40 171.4 139 66.9
FAN06G1976 Fragaria x ananassa HOM05D000147 ORTHO05D007841 1.5e-40 171.4 139 66.9
FAN06G3375 Fragaria x ananassa HOM05D000147 ORTHO05D007841 1.5e-40 171.4 139 66.9
Ciclev10019901m.g Citrus clementina HOM05D000147 ORTHO05D007841 2.6e-40 170.6 135 68.9
Nitab4.5_0008545g0050 Nicotiana tabacum HOM05D000147 ORTHO05D007841 2.6e-40 170.6 144 64.6
MD02G1200800 Malus domestica HOM05D000147 ORTHO05D007841 3.3e-40 170.2 143 66.4
Nitab4.5_0002436g0040 Nicotiana tabacum HOM05D000147 ORTHO05D007841 4.4e-40 169.9 144 63.9
FAN10G2051 Fragaria x ananassa HOM05D000147 ORTHO05D007841 1.7e-39 167.9 139 65.5
RcHm_v2.0_Chr1g0350931 Rosa chinensis HOM05D000147 ORTHO05D007841 3.7e-39 166.8 138 65.2
Lsat_1_v5_gn_3_133581 Lactuca sativa HOM05D000147 ORTHO05D007841 4.8e-39 166.4 135 66.7
CAN.G78.14 Capsicum annuum HOM05D000147 ORTHO05D007841 8.2e-39 165.6 142 63.4
Prupe.2G148300 Prunus persica HOM05D000147 ORTHO05D007841 8.2e-39 165.6 139 64.7
Cpa.g.sc18.146 Carica papaya HOM05D000147 ORTHO05D007841 1.1e-38 165.2 136 66.9
Dinv43728 Davidia involucrata HOM05D000147 ORTHO05D007841 1.1e-38 165.2 136 68.4
CSS0036479 Camellia sinensis var. sinensis HOM05D000147 ORTHO05D007841 1.4e-38 164.9 138 66.7
Carub.0004s2811 Capsella rubella HOM05D000147 ORTHO05D007841 5.3e-38 162.9 136 63.2
Thhalv10001419m.g Eutrema salsugineum HOM05D000147 ORTHO05D007841 7.0e-38 162.5 141 61.7
CiPaw.02G165900 Carya illinoinensis HOM05D000147 ORTHO05D007841 9.1e-38 162.2 135 65.9
FAN01G2344 Fragaria x ananassa HOM05D000147 ORTHO05D007841 1.2e-37 161.8 142 64.8
FAN03G0084 Fragaria x ananassa HOM05D000147 ORTHO05D007841 1.2e-37 161.8 143 63.6
Cc02_g36470 Coffea canephora HOM05D000147 ORTHO05D007841 1.5e-37 161.4 139 64.7
unitig_26.g9725 Utricularia gibba HOM05D000968 ORTHO05D007841 1.5e-37 161.4 133 66.2
AL4G44670 Arabidopsis lyrata HOM05D000147 ORTHO05D007841 2.6e-37 160.6 136 61.0
Haze_16839 Corylus avellana HOM05D000147 ORTHO05D007841 2.6e-37 160.6 137 65.7
Manes.05G043500 Manihot esculenta HOM05D000147 ORTHO05D007841 2.6e-37 160.6 133 66.9
Gohir.D07G151500 Gossypium hirsutum HOM05D000147 ORTHO05D007841 3.5e-37 160.2 136 66.2
GSVIVG01027537001 Vitis vinifera HOM05D000147 ORTHO05D007841 3.5e-37 160.2 136 65.4
CARHR140690 Cardamine hirsuta HOM05D000147 ORTHO05D007841 4.5e-37 159.8 141 60.3
Gorai.001G173400 Gossypium raimondii HOM05D000147 ORTHO05D007841 4.5e-37 159.8 136 66.2
THA.LOC104827616 Tarenaya hassleriana HOM05D000147 ORTHO05D007841 4.5e-37 159.8 143 62.2
Cfa001693 Carpinus fangiana HOM05D000147 ORTHO05D007841 5.9e-37 159.5 135 65.2
Lj9C572G13 Lonicera japonica HOM05D000147 ORTHO05D007841 5.9e-37 159.5 97 82.5
Atru.chr5.331 Acer truncatum HOM05D000147 ORTHO05D007841 1.0e-36 158.7 136 66.2
Rhsim07G0024600 Rhododendron simsii HOM05D000147 ORTHO05D007841 1.3e-36 158.3 138 63.0
Thecc.07G132300 Theobroma cacao HOM05D000147 ORTHO05D007841 1.7e-36 157.9 135 65.2
Aa31LG1G27000 Aethionema arabicum HOM05D000147 ORTHO05D007841 3.8e-36 156.8 140 60.7
Lj9C209T11 Lonicera japonica HOM05D000147 ORTHO05D007841 6.5e-36 156.0 103 78.6
PGR031G2670 Punica granatum HOM05D000147 ORTHO05D007841 8.5e-36 155.6 136 61.8
vmacro13380 Vaccinium macrocarpon HOM05D000147 ORTHO05D007841 8.5e-36 155.6 135 63.7
Gohir.A07G145300 Gossypium hirsutum HOM05D000147 ORTHO05D007841 1.1e-35 155.2 136 64.7
HanXRQChr13g0425571 Helianthus annuus HOM05D000147 ORTHO05D007841 1.5e-35 154.8 136 61.8
Potri.014G071900 Populus trichocarpa HOM05D000147 ORTHO05D007841 1.5e-35 154.8 137 65.0
Sabra14G0051100 Salix brachista HOM05D000147 ORTHO05D007841 1.5e-35 154.8 137 65.0
Lj9C210G3 Lonicera japonica HOM05D000055 ORTHO05D007841 1.9e-35 154.5 97 80.4
arahy.Tifrunner.gnm1.ann1.WCLM28 Arachis hypogaea HOM05D000147 ORTHO05D007841 2.5e-35 154.1 138 60.9
arahy.Tifrunner.gnm1.ann1.W5K1B8 Arachis hypogaea HOM05D000147 ORTHO05D007841 4.2e-35 153.3 138 60.9
BcaB02g09001 Brassica carinata HOM05D000147 ORTHO05D007841 5.5e-35 152.9 136 58.1
A05p05520 Brassica napus HOM05D000147 ORTHO05D007841 5.5e-35 152.9 136 58.8
BraA05t19522Z Brassica rapa HOM05D000147 ORTHO05D007841 5.5e-35 152.9 136 58.8
Eucgr.D02441 Eucalyptus grandis HOM05D000147 ORTHO05D007841 5.5e-35 152.9 111 73.0
Sc02g0002430 Simmondsia chinensis HOM05D000147 ORTHO05D007841 7.2e-35 152.5 142 62.7
BcaB06g29419 Brassica carinata HOM05D000147 ORTHO05D007841 9.4e-35 152.1 142 58.5
Duzib133G1541 Durio zibethinus HOM05D000147 ORTHO05D007841 9.4e-35 152.1 139 64.7
Aqoxy7G00545 Aquilegia oxysepala HOM05D000147 ORTHO05D007841 1.6e-34 151.4 134 61.2
C04p71620 Brassica napus HOM05D000147 ORTHO05D007841 2.1e-34 151.0 144 58.3
Sp4g27530 Schrenkiella parvula HOM05D000147 ORTHO05D007841 2.1e-34 151.0 133 60.9
QL08p051831 Quercus lobata HOM05D000147 ORTHO05D007841 3.6e-34 150.2 139 67.6
TAR629G3167 Trochodendron aralioides HOM05D000147 ORTHO05D007841 6.1e-34 149.4 136 61.0
Sed0028198 Sechium edule HOM05D000147 ORTHO05D007841 8.0e-34 149.1 143 58.0
MELO3C006171.2 Cucumis melo HOM05D000147 ORTHO05D007841 1.4e-33 148.3 142 59.2
BcaC02g07086 Brassica carinata HOM05D000147 ORTHO05D007841 3.0e-33 147.1 144 56.2
A04p33890 Brassica napus HOM05D000147 ORTHO05D007841 3.0e-33 147.1 144 56.2
BraA04t18849Z Brassica rapa HOM05D000147 ORTHO05D007841 3.0e-33 147.1 144 56.2
Sc02g0002480 Simmondsia chinensis HOM05D000108 ORTHO05D001724 3.0e-33 147.1 102 73.5
CANSAT56G2956 Cannabis sativa HOM05D000147 ORTHO05D007841 3.9e-33 146.7 96 77.1
ClCG05G002060 Citrullus lanatus HOM05D000147 ORTHO05D007841 6.7e-33 146.0 142 59.9
Hma1.2p1_0532F.1_g173420 Hydrangea macrophylla HOM05D000147 ORTHO05D007841 8.8e-33 145.6 97 76.3
Hma1.2p1_0532F.1_g173430 Hydrangea macrophylla HOM05D000147 ORTHO05D007841 8.8e-33 145.6 97 76.3
Hund27358 Selenicereus undatus HOM05D000147 ORTHO05D007841 8.8e-33 145.6 144 56.9
Medtr7g075520 Medicago truncatula HOM05D000147 ORTHO05D007841 1.1e-32 145.2 140 63.6
Psat3g114560 Pisum sativum HOM05D000147 ORTHO05D007841 1.1e-32 145.2 138 60.1
BolC4t28667H Brassica oleracea HOM05D000147 ORTHO05D007841 1.5e-32 144.8 144 55.6
COL.COLO4_12580 Corchorus olitorius HOM05D000147 ORTHO05D007841 2.6e-32 144.1 92 78.3
Lj1g0021065 Lotus japonicus HOM05D000147 ORTHO05D007841 4.4e-32 143.3 143 63.6
C04p06460 Brassica napus HOM05D000147 ORTHO05D007841 5.7e-32 142.9 97 72.2
BolC4t22269H Brassica oleracea HOM05D000147 ORTHO05D007841 5.7e-32 142.9 97 72.2
TPR.G26950 Trifolium pratense HOM05D000147 ORTHO05D007841 5.7e-32 142.9 137 59.1
Ah.05g175240 Amaranthus hybridus HOM05D000147 ORTHO05D007841 9.7e-32 142.1 145 57.2
Actinidia12275 Actinidia chinensis HOM05D000147 ORTHO05D007841 2.2e-31 141.0 138 59.4
Lalb_Chr01g0021291 Lupinus albus HOM05D000147 ORTHO05D007841 2.2e-31 141.0 140 57.9
CsaV3_3G009500 Cucumis sativus L. HOM05D000147 ORTHO05D007841 3.7e-31 140.2 103 70.9
Glyma.09G267500 Glycine max HOM05D000147 ORTHO05D007841 3.7e-31 140.2 140 64.3
Ca_07834_v3 Cicer arietinum L. HOM05D000147 ORTHO05D007841 6.3e-31 139.4 91 76.9
Phvul.008G074900 Phaseolus vulgaris HOM05D000147 ORTHO05D007841 8.2e-31 139.0 148 54.1
DCAR_006880 Daucus carota HOM05D000147 ORTHO05D007841 1.1e-30 138.7 91 79.1
ECA240G0990 Erigeron canadensis HOM05D000147 ORTHO05D007841 1.1e-30 138.7 136 64.7
VMungo1383G3024 Vigna mungo HOM05D000147 ORTHO05D007841 2.4e-30 137.5 142 62.0
Glyma.18G222400 Glycine max HOM05D000147 ORTHO05D007841 3.1e-30 137.1 96 71.9
MBI12_g33357_MAGBIO Magnolia biondii HOM05D000147 ORTHO05D007841 9.1e-30 135.6 149 52.3
EL10Ac1g00931 Beta vulgaris HOM05D000147 ORTHO05D007841 4.5e-29 133.3 142 55.6
AUR62004238 Chenopodium quinoa HOM05D000147 ORTHO05D007841 1.3e-28 131.7 142 56.3
PSO478G4229 Papaver somniferum HOM05D000147 ORTHO05D007841 8.5e-28 129.0 141 54.6
HPP92_020937 Vanilla planifolia HOM05D000147 ORTHO05D007841 8.5e-28 129.0 149 50.3
Nn1g01162 Nelumbo nucifera HOM05D000147 ORTHO05D007841 1.1e-27 128.6 143 54.5
PSO782G4322 Papaver somniferum HOM05D000147 ORTHO05D007841 4.2e-27 126.7 141 52.5
HPP92_020955 Vanilla planifolia HOM05D000147 ORTHO05D007841 7.2e-27 125.9 138 51.4
Zm00001eb378370 Zea mays HOM05D000147 ORTHO05D007841 1.5e-24 118.2 139 48.2
Os06g0130000 Oryza sativa ssp. japonica HOM05D000147 ORTHO05D007841 7.5e-24 115.9 144 46.5
Zm00001eb269570 Zea mays HOM05D000147 ORTHO05D020553 9.8e-24 115.5 138 47.8
MBI12_g37711_MAGBIO Magnolia biondii HOM05D000147 ORTHO05D007841 6.3e-23 112.8 101 65.3
CDE04G0102 Ceratophyllum demersum HOM05D000147 ORTHO05D007841 2.7e-21 107.5 92 59.8
ATR0757G121 Amborella trichopoda HOM05D000147 ORTHO05D007841 8.5e-20 102.4 93 60.2
Lj9C209T8 Lonicera japonica HOM05D000147 ORTHO05D020553 1.8e-17 94.7 65 75.4
Mapoly0103s0050 Marchantia polymorpha HOM05D000147 ORTHO05D007841 3.0e-17 94.0 99 49.5
Lju1295C3G7 Lonicera japonica HOM05D000055 ORTHO05D007841 8.8e-17 92.4 86 59.3
Dinv31193 Davidia involucrata HOM05D005725 ORTHO05D020553 4.4e-16 90.1 71 64.8
Pp3c11_13620 Physcomitrium patens HOM05D000147 ORTHO05D007841 6.3e-15 86.3 89 52.8
AUR62013610 Chenopodium quinoa HOM05D000147 ORTHO05D007841 4.5e-13 80.1 119 46.2
SMO169G0088 Selaginella moellendorffii HOM05D000147 ORTHO05D007841 2.3e-12 77.8 89 41.6
RcHm_v2.0_Chr1g0351021 Rosa chinensis HOM05D000147 ORTHO05D020553 3.6e-10 70.5 74 54.1
Dinv43836 Davidia involucrata HOM05D000147 ORTHO05D020553 2.0e-08 64.7 40 75.0
CBR_g39027 Chara braunii HOM05D000147 ORTHO05D007841 7.0e-06 56.2 91 31.9


User provided reference genes

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