Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold153G36972 Striga asiatica HOM05D008230 ORTHO05D010279 3.2e-53 211.5 106 100.0
Manes.05G048600 Manihot esculenta HOM05D008230 ORTHO05D010279 1.8e-11 72.8 49 65.3
Migut.B01599 Erythranthe guttata HOM05D008230 ORTHO05D010279 2.3e-11 72.4 76 50.0
COL.COLO4_12495 Corchorus olitorius HOM05D008230 ORTHO05D010279 8.9e-11 70.5 104 38.5
CANSAT56G1720 Cannabis sativa HOM05D008230 ORTHO05D010279 3.4e-10 68.6 99 42.4
CANSAT56G2525 Cannabis sativa HOM05D008230 ORTHO05D010279 3.4e-10 68.6 39 74.4
Gohir.A08G136500 Gossypium hirsutum HOM05D008230 ORTHO05D010279 7.6e-10 67.4 53 56.6
SalBow5G3157 Salvia bowleyana HOM05D008230 ORTHO05D010279 7.6e-10 67.4 82 41.5
Gohir.D08G157300 Gossypium hirsutum HOM05D008230 ORTHO05D010279 9.9e-10 67.0 40 70.0
Potri.002G144400 Populus trichocarpa HOM05D008230 ORTHO05D010279 4.9e-09 64.7 79 44.3
Gorai.004G163600 Gossypium raimondii HOM05D008230 ORTHO05D010279 6.4e-09 64.3 40 67.5
Thecc.01G382000 Theobroma cacao HOM05D008230 ORTHO05D010279 1.1e-08 63.5 99 39.4
CiPaw.14G026100 Carya illinoinensis HOM05D008230 ORTHO05D010279 1.4e-08 63.2 48 58.3
Sabra14G0044300 Salix brachista HOM05D008230 ORTHO05D010279 1.4e-08 63.2 47 59.6
Oeu045805.1 Olea europaea HOM05D043472 ORTHO05D010279 2.4e-08 62.4 109 39.4
Oeu045807.1 Olea europaea HOM05D043472 ORTHO05D010279 2.4e-08 62.4 109 39.4
QL04p038908 Quercus lobata HOM05D008230 ORTHO05D010279 2.4e-08 62.4 45 60.0
Cpa.g.sc49.161 Carica papaya HOM05D008230 ORTHO05D010279 3.2e-08 62.0 53 56.6
Lalb_Chr03g0039781 Lupinus albus HOM05D008230 ORTHO05D010279 7.1e-08 60.8 74 44.6
Sabra02G0112300 Salix brachista HOM05D008230 ORTHO05D010279 7.1e-08 60.8 32 78.1
Cfa011173 Carpinus fangiana HOM05D008230 ORTHO05D010279 1.2e-07 60.1 106 34.0
Potri.014G060400 Populus trichocarpa HOM05D008230 ORTHO05D010279 2.1e-07 59.3 105 37.1
Nitab4.5_0000859g0270 Nicotiana tabacum HOM05D016400 ORTHO05D020901 3.5e-07 58.5 67 46.3
FAN06G0210 Fragaria x ananassa HOM05D008230 ORTHO05D010279 4.6e-07 58.2 43 60.5
FAN06G3296 Fragaria x ananassa HOM05D008230 ORTHO05D010279 4.6e-07 58.2 43 60.5
FAN10G0483 Fragaria x ananassa HOM05D008230 ORTHO05D010279 4.6e-07 58.2 43 60.5
FAN10G2770 Fragaria x ananassa HOM05D008230 ORTHO05D010279 4.6e-07 58.2 43 60.5
Gohir.D12G097250 Gossypium hirsutum HOM05D008230 ORTHO05D010279 4.6e-07 58.2 67 46.3
Gorai.008G105900 Gossypium raimondii HOM05D008230 ORTHO05D010279 4.6e-07 58.2 67 46.3
Hma1.2p1_0041F.1_g025330 Hydrangea macrophylla HOM05D008230 ORTHO05D010279 4.6e-07 58.2 61 44.3
CiPaw.13G032900 Carya illinoinensis HOM05D008230 ORTHO05D010279 6.0e-07 57.8 100 38.0
Haze_02676 Corylus avellana HOM05D008230 ORTHO05D010279 6.0e-07 57.8 33 69.7
FAN03G0682 Fragaria x ananassa HOM05D008230 ORTHO05D010279 6.0e-07 57.8 42 61.9
FAN03G1067 Fragaria x ananassa HOM05D008230 ORTHO05D010279 6.0e-07 57.8 42 61.9
FvH4_7g11140 Fragaria vesca HOM05D008230 ORTHO05D010279 1.0e-06 57.0 43 60.5
Gohir.A12G094500 Gossypium hirsutum HOM05D008230 ORTHO05D010279 1.3e-06 56.6 64 46.9
PGR004G0323 Punica granatum HOM05D008230 ORTHO05D010279 1.3e-06 56.6 77 44.2
arahy.Tifrunner.gnm1.ann1.MFP8ME Arachis hypogaea HOM05D008230 ORTHO05D010279 1.7e-06 56.2 114 28.9
MD07G1116200 Malus domestica HOM05D008230 ORTHO05D010279 1.7e-06 56.2 80 46.2
FAN01G0499 Fragaria x ananassa HOM05D008230 ORTHO05D010279 2.3e-06 55.8 102 38.2
Prupe.2G138500 Prunus persica HOM05D008230 ORTHO05D010279 2.3e-06 55.8 82 41.5
Psat7g237760 Pisum sativum HOM05D008230 ORTHO05D010279 3.0e-06 55.5 111 34.2
TPR.G4997 Trifolium pratense HOM05D008230 ORTHO05D010279 3.0e-06 55.5 108 35.2
Nn6g34001 Nelumbo nucifera HOM05D008230 ORTHO05D010279 5.1e-06 54.7 44 56.8
DCAR_029878 Daucus carota HOM05D045042 ORTHO05D010279 6.6e-06 54.3 37 67.6
Phvul.010G077800 Phaseolus vulgaris HOM05D008230 ORTHO05D010279 6.6e-06 54.3 48 52.1
Dinv44123 Davidia involucrata HOM05D008230 ORTHO05D010279 8.6e-06 53.9 44 52.3
Dinv44126 Davidia involucrata HOM05D008230 ORTHO05D010279 8.6e-06 53.9 44 52.3


User provided reference genes

Program Settings