Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold152G36871 Striga asiatica HOM05D006906 ORTHO05D008578 6.7e-54 213.8 109 100.0
MSTRG.17420 Avicennia marina HOM05D006906 ORTHO05D008578 3.7e-28 128.3 112 65.2
CSS0004987 Camellia sinensis var. sinensis HOM05D006906 ORTHO05D008578 1.5e-24 116.3 98 68.4
unitig_21.g20623 Utricularia gibba HOM05D006906 ORTHO05D008578 9.5e-24 113.6 107 61.7
PGR031G1810 Punica granatum HOM05D006906 ORTHO05D008578 2.8e-23 112.1 95 61.1
TWI56G0746 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 2.8e-23 112.1 105 56.2
Migut.N02816 Erythranthe guttata HOM05D006906 ORTHO05D008578 6.1e-23 110.9 82 75.6
Actinidia19594 Actinidia chinensis HOM05D006906 ORTHO05D008578 8.0e-23 110.5 101 61.4
Manes.18G052450 Manihot esculenta HOM05D006906 ORTHO05D008578 1.0e-22 110.2 122 50.8
Ah.05g166860 Amaranthus hybridus HOM05D006906 ORTHO05D008578 3.0e-22 108.6 95 58.9
AT5G17870 Arabidopsis thaliana HOM05D006906 ORTHO05D008578 3.0e-22 108.6 106 59.4
BolC2t06848H Brassica oleracea HOM05D006906 ORTHO05D008578 3.0e-22 108.6 98 62.2
C09p59250 Brassica napus HOM05D006906 ORTHO05D008578 4.0e-22 108.2 105 57.1
BcaB01g05160 Brassica carinata HOM05D006906 ORTHO05D008578 8.9e-22 107.1 104 59.6
BcaC04g18752 Brassica carinata HOM05D006906 ORTHO05D008578 8.9e-22 107.1 101 59.4
BolC3t13482H Brassica oleracea HOM05D006906 ORTHO05D008578 8.9e-22 107.1 104 59.6
Dinv01221 Davidia involucrata HOM05D006906 ORTHO05D008578 8.9e-22 107.1 114 53.5
Thhalv10015071m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 1.2e-21 106.7 105 57.1
Aqoxy6G01513 Aquilegia oxysepala HOM05D006906 ORTHO05D008578 1.5e-21 106.3 106 55.7
BolC9t58765H Brassica oleracea HOM05D006906 ORTHO05D008578 1.5e-21 106.3 101 59.4
CARHR195300 Cardamine hirsuta HOM05D006906 ORTHO05D008578 1.5e-21 106.3 106 61.3
SalBow2G0068 Salvia bowleyana HOM05D006906 ORTHO05D008578 2.0e-21 105.9 105 58.1
A02p04550 Brassica napus HOM05D006906 ORTHO05D008578 2.6e-21 105.5 101 60.4
BraA03t10177Z Brassica rapa HOM05D006906 ORTHO05D008578 2.6e-21 105.5 98 59.2
Rhsim07G0215600 Rhododendron simsii HOM05D006906 ORTHO05D008578 2.6e-21 105.5 116 52.6
BcaC03g13555 Brassica carinata HOM05D006906 ORTHO05D008578 3.4e-21 105.1 104 60.6
Ciclev10002778m.g Citrus clementina HOM05D006906 ORTHO05D008578 3.4e-21 105.1 106 56.6
Sp6g26380 Schrenkiella parvula HOM05D006906 ORTHO05D008578 3.4e-21 105.1 101 58.4
Carub.0006s1610 Capsella rubella HOM05D006906 ORTHO05D008578 5.7e-21 104.4 104 58.7
TAR628G1359 Trochodendron aralioides HOM05D006906 ORTHO05D008578 5.7e-21 104.4 103 58.3
Aa31LG11G11710 Aethionema arabicum HOM05D006906 ORTHO05D008578 9.8e-21 103.6 97 61.9
BcaB08g36735 Brassica carinata HOM05D006906 ORTHO05D008578 9.8e-21 103.6 105 55.2
BraA02t05416Z Brassica rapa HOM05D006906 ORTHO05D008578 9.8e-21 103.6 98 62.2
Hma1.2p1_1068F.1_g254010 Hydrangea macrophylla HOM05D006906 ORTHO05D008578 9.8e-21 103.6 104 52.9
AL6G28970 Arabidopsis lyrata HOM05D006906 ORTHO05D008578 1.3e-20 103.2 108 57.4
PGSC0003DMG400004936 Solanum tuberosum HOM05D006906 ORTHO05D008578 2.2e-20 102.4 118 53.4
C03p09940 Brassica napus HOM05D006906 ORTHO05D008578 2.8e-20 102.1 97 57.7
vmacro04612 Vaccinium macrocarpon HOM05D006906 ORTHO05D008578 2.8e-20 102.1 93 58.1
BcaB01g04920 Brassica carinata HOM05D006906 ORTHO05D008578 3.7e-20 101.7 102 55.9
Solyc04g077130.1 Solanum lycopersicum HOM05D006906 ORTHO05D008578 4.9e-20 101.3 118 52.5
Sopen04g030750 Solanum pennellii HOM05D006906 ORTHO05D008578 6.3e-20 100.9 118 52.5
BraA10t44222Z Brassica rapa HOM05D006906 ORTHO05D008578 8.3e-20 100.5 106 55.7
MD08G1211600 Malus domestica HOM05D006906 ORTHO05D008578 8.3e-20 100.5 117 52.1
Nitab4.5_0002415g0040 Nicotiana tabacum HOM05D006906 ORTHO05D008578 1.1e-19 100.1 101 55.4
THA.LOC104806946 Tarenaya hassleriana HOM05D006906 ORTHO05D008578 1.1e-19 100.1 98 54.1
EL10Ac1g02326 Beta vulgaris HOM05D006906 ORTHO05D008578 1.8e-19 99.4 92 57.6
Prupe.1G543500 Prunus persica HOM05D006906 ORTHO05D008578 1.8e-19 99.4 102 56.9
Sc26g0004280 Simmondsia chinensis HOM05D006906 ORTHO05D008578 1.8e-19 99.4 88 63.6
A10p21600 Brassica napus HOM05D006906 ORTHO05D008578 3.1e-19 98.6 106 55.7
ClCG11G014950 Citrullus lanatus HOM05D006906 ORTHO05D008578 4.1e-19 98.2 115 48.7
Eucgr.F00111 Eucalyptus grandis HOM05D006906 ORTHO05D008578 4.1e-19 98.2 89 56.2
Haze_19024 Corylus avellana HOM05D006906 ORTHO05D008578 5.4e-19 97.8 111 50.5
Sabra02G0088700 Salix brachista HOM05D006906 ORTHO05D008578 7.0e-19 97.4 113 51.3
CANSAT01G2303 Cannabis sativa HOM05D006906 ORTHO05D008578 1.6e-18 96.3 97 59.8
Cfa020715 Carpinus fangiana HOM05D006906 ORTHO05D008578 1.6e-18 96.3 111 51.4
DCAR_012832 Daucus carota HOM05D006906 ORTHO05D008578 2.0e-18 95.9 96 57.3
Peaxi162Scf00628g00053 Petunia axillaris HOM05D006906 ORTHO05D008578 2.0e-18 95.9 90 62.2
QL12p040639 Quercus lobata HOM05D006906 ORTHO05D008578 2.0e-18 95.9 96 55.2
Cpa.g.sc160.12 Carica papaya HOM05D006906 ORTHO05D008578 3.5e-18 95.1 115 47.8
CiPaw.15G153800 Carya illinoinensis HOM05D006906 ORTHO05D008578 3.5e-18 95.1 113 51.3
Potri.002G112500 Populus trichocarpa HOM05D006906 ORTHO05D008578 4.5e-18 94.7 94 55.3
Sed0015154 Sechium edule HOM05D006906 ORTHO05D008578 4.5e-18 94.7 113 46.9
MELO3C003483.2 Cucumis melo HOM05D006906 ORTHO05D008578 7.8e-18 94.0 93 52.7
RcHm_v2.0_Chr7g0232161 Rosa chinensis HOM05D006906 ORTHO05D008578 1.0e-17 93.6 112 51.8
CAN.G416.50 Capsicum annuum HOM05D006906 ORTHO05D008578 1.3e-17 93.2 107 51.4
AUR62035774 Chenopodium quinoa HOM05D006906 ORTHO05D008578 1.3e-17 93.2 92 54.3
Nitab4.5_0001614g0100 Nicotiana tabacum HOM05D006906 ORTHO05D008578 1.3e-17 93.2 91 61.5
HanXRQChr16g0510751 Helianthus annuus HOM05D006906 ORTHO05D008578 1.7e-17 92.8 110 51.8
HanXRQChr16g0510761 Helianthus annuus HOM05D006906 ORTHO05D008578 1.7e-17 92.8 110 51.8
AUR62034964 Chenopodium quinoa HOM05D006906 ORTHO05D008578 2.9e-17 92.0 92 55.4
FvH4_5g33440 Fragaria vesca HOM05D006906 ORTHO05D008578 5.0e-17 91.3 107 55.1
FAN18G0347 Fragaria x ananassa HOM05D006906 ORTHO05D008578 5.0e-17 91.3 107 55.1
Duzib093G2206 Durio zibethinus HOM05D006906 ORTHO05D008578 1.5e-16 89.7 76 63.2
MD15G1394500 Malus domestica HOM05D006906 ORTHO05D008578 1.9e-16 89.4 117 49.6
Atru.chr13.910 Acer truncatum HOM05D006906 ORTHO05D008578 2.5e-16 89.0 101 47.5
Gohir.A05G213900 Gossypium hirsutum HOM05D006906 ORTHO05D008578 2.5e-16 89.0 52 76.9
Gorai.009G224100 Gossypium raimondii HOM05D006906 ORTHO05D008578 2.5e-16 89.0 52 76.9
Psat1g221800 Pisum sativum HOM05D006906 ORTHO05D008578 2.5e-16 89.0 108 51.9
FAN08G0950 Fragaria x ananassa HOM05D006906 ORTHO05D008578 3.3e-16 88.6 107 53.3
Duzib116G0218 Durio zibethinus HOM05D006906 ORTHO05D008578 4.3e-16 88.2 52 75.0
Duzib116G0588 Durio zibethinus HOM05D006906 ORTHO05D008578 4.3e-16 88.2 52 75.0
Gohir.D05G217300 Gossypium hirsutum HOM05D006906 ORTHO05D008578 9.5e-16 87.0 52 75.0
Lsat_1_v5_gn_6_108161 Lactuca sativa HOM05D006906 ORTHO05D008578 9.5e-16 87.0 113 46.0
ECA246G4410 Erigeron canadensis HOM05D006906 ORTHO05D008578 1.2e-15 86.7 113 46.9
Glyma.06G089700 Glycine max HOM05D006906 ORTHO05D008578 1.2e-15 86.7 103 52.4
Os11g0550800 Oryza sativa ssp. japonica HOM05D006906 ORTHO05D008578 1.2e-15 86.7 100 52.0
TWI12G0785 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 1.6e-15 86.3 103 50.5
Phvul.009G113500 Phaseolus vulgaris HOM05D006906 ORTHO05D008578 2.1e-15 85.9 104 49.0
CDE01G0046 Ceratophyllum demersum HOM05D006906 ORTHO05D008578 2.8e-15 85.5 68 61.8
Prupe.3G080900 Prunus persica HOM05D006906 ORTHO05D008578 2.8e-15 85.5 71 60.6
Thecc.08G080900 Theobroma cacao HOM05D006906 ORTHO05D008578 2.8e-15 85.5 52 75.0
COL.COLO4_35364 Corchorus olitorius HOM05D006906 ORTHO05D008578 6.1e-15 84.3 52 75.0
Nn5g30714 Nelumbo nucifera HOM05D006906 ORTHO05D008578 1.4e-14 83.2 96 51.0
ATR0767G231 Amborella trichopoda HOM05D006906 ORTHO05D008578 1.8e-14 82.8 53 75.5
Medtr3g110640 Medicago truncatula HOM05D006906 ORTHO05D008578 1.8e-14 82.8 105 51.4
MBI16_g41120_MAGBIO Magnolia biondii HOM05D006906 ORTHO05D008578 2.3e-14 82.4 86 51.2
TPR.G12407 Trifolium pratense HOM05D006906 ORTHO05D008578 2.3e-14 82.4 105 51.4
BcaC04g18751 Brassica carinata HOM05D006906 ORTHO05D008578 3.0e-14 82.0 94 53.2
C09p59230 Brassica napus HOM05D006906 ORTHO05D008578 3.0e-14 82.0 94 53.2
BolC9t58763H Brassica oleracea HOM05D006906 ORTHO05D008578 1.2e-13 80.1 99 50.5
Thhalv10009816m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 2.2e-12 75.9 60 63.3
PSO541G5790 Papaver somniferum HOM05D006906 ORTHO05D008578 3.7e-12 75.1 57 64.9
Prupe.8G111300 Prunus persica HOM05D006906 ORTHO05D008578 3.7e-12 75.1 62 66.1
PSO675G4379 Papaver somniferum HOM05D006906 ORTHO05D008578 4.9e-12 74.7 57 63.2
HPP92_027718 Vanilla planifolia HOM05D006906 ORTHO05D008578 1.7e-09 66.2 39 82.1
HPP92_027715 Vanilla planifolia HOM05D006906 ORTHO05D008578 3.9e-09 65.1 50 68.0
Pp3c3_11690 Physcomitrium patens HOM05D006906 ORTHO05D008578 1.1e-08 63.5 89 48.3
Mapoly0090s0093 Marchantia polymorpha HOM05D006906 ORTHO05D008578 5.6e-08 61.2 55 56.4
A03p08530 Brassica napus HOM05D006906 ORTHO05D008578 6.2e-07 57.8 96 41.7
CBR_g48804 Chara braunii HOM05D006906 ORTHO05D008578 1.1e-06 57.0 45 57.8
Manes.05G185700 Manihot esculenta HOM05D006906 ORTHO05D008578 1.1e-06 57.0 107 39.3


User provided reference genes

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