Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold152G36870 Striga asiatica HOM05D006218 ORTHO05D007338 7.2e-65 250.4 122 100.0
SGA_v2.0_scaffold21G09648 Striga asiatica HOM05D006218 ORTHO05D007338 3.7e-45 184.9 112 81.2
SalBow6G0752 Salvia bowleyana HOM05D006218 ORTHO05D007338 3.5e-19 98.6 119 48.7
Migut.O00315 Erythranthe guttata HOM05D006218 ORTHO05D007338 1.5e-17 93.2 124 47.6
MSTRG.24922 Avicennia marina HOM05D006218 ORTHO05D007338 7.3e-17 90.9 119 48.7
unitig_46.g18024 Utricularia gibba HOM05D006218 ORTHO05D007338 1.3e-10 70.1 111 41.4
vmacro04416 Vaccinium macrocarpon HOM05D006218 ORTHO05D007338 5.6e-09 64.7 106 38.7
Medtr2g100200 Medicago truncatula HOM05D006218 ORTHO05D007338 9.6e-09 63.9 80 45.0
Actinidia37914 Actinidia chinensis HOM05D006218 ORTHO05D007338 3.7e-08 62.0 75 48.0
QL02p015030 Quercus lobata HOM05D006218 ORTHO05D007338 1.1e-07 60.5 110 39.1
Nitab4.5_0004275g0030 Nicotiana tabacum HOM05D006218 ORTHO05D007338 1.4e-07 60.1 99 38.4
QL02p015096 Quercus lobata HOM05D006218 ORTHO05D007338 1.4e-07 60.1 118 33.9
Sc16g0011970 Simmondsia chinensis HOM05D006218 ORTHO05D007338 1.4e-07 60.1 85 45.9
Haze_22828 Corylus avellana HOM05D006218 ORTHO05D007338 2.4e-07 59.3 122 35.2
Ca_01194_v3 Cicer arietinum L. HOM05D006218 ORTHO05D007338 3.1e-07 58.9 101 37.6
Cc00_g16990 Coffea canephora HOM05D006218 ORTHO05D007338 5.3e-07 58.2 91 38.5
Duzib093G0304 Durio zibethinus HOM05D006218 ORTHO05D007338 9.0e-07 57.4 109 34.9
Rhsim10G0063100 Rhododendron simsii HOM05D006218 ORTHO05D007338 1.2e-06 57.0 71 43.7
PGSC0003DMG400021154 Solanum tuberosum HOM05D006218 ORTHO05D007338 1.5e-06 56.6 76 42.1
CSS0043525 Camellia sinensis var. sinensis HOM05D006218 ORTHO05D007338 2.0e-06 56.2 76 43.4
Nitab4.5_0003027g0060 Nicotiana tabacum HOM05D006218 ORTHO05D007338 2.6e-06 55.8 99 36.4
CiPaw.08G075100 Carya illinoinensis HOM05D006218 ORTHO05D007338 3.4e-06 55.5 126 32.5
Hma1.2p1_0060F.1_g032840 Hydrangea macrophylla HOM05D006218 ORTHO05D007338 3.4e-06 55.5 96 34.4
Nn5g30994 Nelumbo nucifera HOM05D006218 ORTHO05D007338 3.4e-06 55.5 75 44.0
Thecc.08G062100 Theobroma cacao HOM05D006218 ORTHO05D007338 3.4e-06 55.5 120 31.7
CSS0036772 Camellia sinensis var. sinensis HOM05D006218 ORTHO05D007338 4.5e-06 55.1 76 43.4
Rhsim10G0065400 Rhododendron simsii HOM05D006218 ORTHO05D007338 4.5e-06 55.1 79 39.2
Dinv31962 Davidia involucrata HOM05D006218 ORTHO05D007338 5.8e-06 54.7 96 35.4
Phvul.002G162200 Phaseolus vulgaris HOM05D006218 ORTHO05D007338 7.6e-06 54.3 85 43.5
THA.LOC104801950 Tarenaya hassleriana HOM05D006218 ORTHO05D007338 7.6e-06 54.3 108 35.2
Cfa014110 Carpinus fangiana HOM05D006218 ORTHO05D007338 1.0e-05 53.9 122 33.6


User provided reference genes

Program Settings