Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold152G36869 Striga asiatica HOM05D006480 ORTHO05D008072 1.0e-69 266.5 130 100.0
MSTRG.25010 Avicennia marina HOM05D006480 ORTHO05D008072 5.0e-64 247.7 130 90.0
Cc10_g07920 Coffea canephora HOM05D006480 ORTHO05D008072 4.2e-63 244.6 127 89.0
Migut.N02813 Erythranthe guttata HOM05D006480 ORTHO05D008072 6.1e-62 240.7 130 88.5
CsaV3_3G048380 Cucumis sativus L. HOM05D006480 ORTHO05D008072 2.0e-60 235.7 127 87.4
Sc15g0005270 Simmondsia chinensis HOM05D006480 ORTHO05D008072 3.4e-60 235.0 128 85.2
Sed0011969 Sechium edule HOM05D006480 ORTHO05D008072 5.7e-60 234.2 127 86.6
Prupe.8G152200 Prunus persica HOM05D006480 ORTHO05D008072 2.2e-59 232.3 123 88.6
Dinv16062 Davidia involucrata HOM05D006480 ORTHO05D008072 2.8e-59 231.9 123 87.8
FvH4_2g03000 Fragaria vesca HOM05D006480 ORTHO05D008072 2.8e-59 231.9 123 87.8
FAN15G0464 Fragaria x ananassa HOM05D006480 ORTHO05D008072 2.8e-59 231.9 123 87.8
SalBow7G2271 Salvia bowleyana HOM05D006480 ORTHO05D008072 3.7e-59 231.5 127 86.6
Actinidia10245 Actinidia chinensis HOM05D006480 ORTHO05D008072 4.8e-59 231.1 128 85.2
Cpa.g.sc160.14 Carica papaya HOM05D006480 ORTHO05D008072 4.8e-59 231.1 127 87.4
Eucgr.F02200 Eucalyptus grandis HOM05D006480 ORTHO05D008072 4.8e-59 231.1 128 86.7
Medtr3g110600 Medicago truncatula HOM05D006480 ORTHO05D008072 6.3e-59 230.7 127 85.0
CiPaw.15G154000 Carya illinoinensis HOM05D006480 ORTHO05D008072 8.3e-59 230.3 127 85.8
Dinv01222 Davidia involucrata HOM05D006480 ORTHO05D008072 8.3e-59 230.3 128 84.4
Hma1.2p1_1068F.1_g253990 Hydrangea macrophylla HOM05D006480 ORTHO05D008072 1.1e-58 229.9 127 85.8
Nn5g30706 Nelumbo nucifera HOM05D006480 ORTHO05D008072 1.4e-58 229.6 123 86.2
Manes.18G039100 Manihot esculenta HOM05D006480 ORTHO05D008072 1.8e-58 229.2 127 85.0
GSVIVG01009268001 Vitis vinifera HOM05D006480 ORTHO05D008072 1.8e-58 229.2 122 89.3
Lsat_1_v5_gn_5_111841 Lactuca sativa HOM05D006480 ORTHO05D008072 3.1e-58 228.4 123 85.4
Gohir.A05G213700 Gossypium hirsutum HOM05D006480 ORTHO05D008072 4.1e-58 228.0 130 83.1
TPR.G12422 Trifolium pratense HOM05D006480 ORTHO05D008072 4.1e-58 228.0 127 85.8
HPP92_019513 Vanilla planifolia HOM05D006480 ORTHO05D008072 5.4e-58 227.6 129 86.0
FAN20G1015 Fragaria x ananassa HOM05D006480 ORTHO05D008072 7.0e-58 227.3 123 86.2
Manes.05G185600 Manihot esculenta HOM05D006480 ORTHO05D008072 7.0e-58 227.3 127 83.5
Aqoxy6G01530 Aquilegia oxysepala HOM05D006480 ORTHO05D008072 9.1e-58 226.9 123 86.2
Os12g0633200 Oryza sativa ssp. japonica HOM05D006480 ORTHO05D008072 9.1e-58 226.9 128 82.8
Potri.002G112700 Populus trichocarpa HOM05D006480 ORTHO05D008072 9.1e-58 226.9 122 88.5
Psat5g019760 Pisum sativum HOM05D006480 ORTHO05D008072 1.6e-57 226.1 127 84.3
CANSAT25G0792 Cannabis sativa HOM05D006480 ORTHO05D008072 2.0e-57 225.7 123 87.8
Ca_30083_v3 Cicer arietinum L. HOM05D006480 ORTHO05D008072 2.0e-57 225.7 128 84.4
Ciclev10002836m.g Citrus clementina HOM05D006480 ORTHO05D008072 2.0e-57 225.7 127 83.5
Glyma.04G087700 Glycine max HOM05D006480 ORTHO05D008072 2.0e-57 225.7 127 83.5
Gohir.D06G025000 Gossypium hirsutum HOM05D006480 ORTHO05D008072 2.0e-57 225.7 122 86.1
Peaxi162Scf00628g00517 Petunia axillaris HOM05D006480 ORTHO05D008072 2.0e-57 225.7 128 83.6
Psat0s2525g0120 Pisum sativum HOM05D006480 ORTHO05D008072 2.0e-57 225.7 127 85.0
Ah.05g166870 Amaranthus hybridus HOM05D006480 ORTHO05D008072 2.7e-57 225.3 129 81.4
RcHm_v2.0_Chr6g0247791 Rosa chinensis HOM05D006480 ORTHO05D008072 2.7e-57 225.3 122 86.1
TWI56G0589 Tripterygium wilfordii HOM05D006480 ORTHO05D008072 2.7e-57 225.3 127 83.5
Duzib116G0020 Durio zibethinus HOM05D006480 ORTHO05D008072 4.5e-57 224.6 122 86.1
Duzib116G0295 Durio zibethinus HOM05D006480 ORTHO05D008072 4.5e-57 224.6 122 86.1
Glyma.06G089400 Glycine max HOM05D006480 ORTHO05D008072 4.5e-57 224.6 127 83.5
Gohir.D05G217100 Gossypium hirsutum HOM05D006480 ORTHO05D008072 4.5e-57 224.6 130 81.5
Thecc.08G081100 Theobroma cacao HOM05D006480 ORTHO05D008072 4.5e-57 224.6 122 86.1
Duzib093G0124 Durio zibethinus HOM05D006480 ORTHO05D008072 5.9e-57 224.2 122 84.4
Phvul.009G113300 Phaseolus vulgaris HOM05D006480 ORTHO05D008072 5.9e-57 224.2 127 82.7
MBI16_g24165_MAGBIO Magnolia biondii HOM05D006480 ORTHO05D008072 1.0e-56 223.4 128 80.5
Lj1g0003564 Lotus japonicus HOM05D006480 ORTHO05D008072 1.3e-56 223.0 127 82.7
PGSC0003DMG400004956 Solanum tuberosum HOM05D006480 ORTHO05D008072 1.3e-56 223.0 127 83.5
Nitab4.5_0001614g0080 Nicotiana tabacum HOM05D006480 ORTHO05D008072 1.7e-56 222.6 127 84.3
Solyc04g077150.3 Solanum lycopersicum HOM05D006480 ORTHO05D008072 2.3e-56 222.2 127 83.5
Sopen04g030760 Solanum pennellii HOM05D006480 ORTHO05D008072 2.3e-56 222.2 127 83.5
Lalb_Chr11g0064651 Lupinus albus HOM05D006480 ORTHO05D008072 2.9e-56 221.9 127 82.7
CAN.G416.48 Capsicum annuum HOM05D006480 ORTHO05D008072 3.8e-56 221.5 127 83.5
MD05G1108500 Malus domestica HOM05D006480 ORTHO05D008072 3.8e-56 221.5 122 84.4
Hma1.2p1_2654F.1_g326220 Hydrangea macrophylla HOM05D006480 ORTHO05D008072 5.0e-56 221.1 123 84.6
HanXRQChr10g0293651 Helianthus annuus HOM05D006480 ORTHO05D008072 6.6e-56 220.7 123 83.7
ECA234G4602 Erigeron canadensis HOM05D006480 ORTHO05D008072 8.6e-56 220.3 129 82.2
PGR031G1285 Punica granatum HOM05D006480 ORTHO05D008072 8.6e-56 220.3 122 85.2
MBI16_g31814_MAGBIO Magnolia biondii HOM05D006480 ORTHO05D008072 1.1e-55 219.9 128 79.7
Zm00001eb032930 Zea mays HOM05D006480 ORTHO05D008072 1.5e-55 219.5 118 86.4
PSO675G8575 Papaver somniferum HOM05D006480 ORTHO05D008072 1.9e-55 219.2 123 82.9
PSO541G2150 Papaver somniferum HOM05D006480 ORTHO05D008072 3.3e-55 218.4 123 82.9
THA.LOC104816778 Tarenaya hassleriana HOM05D006480 ORTHO05D008072 3.3e-55 218.4 128 81.2
Zm00001eb282130 Zea mays HOM05D006480 ORTHO05D008072 5.5e-55 217.6 118 86.4
Rhsim07G0215700 Rhododendron simsii HOM05D006480 ORTHO05D008072 1.6e-54 216.1 138 76.1
AL1G20730 Arabidopsis lyrata HOM05D006480 ORTHO05D008072 2.8e-54 215.3 127 81.9
EL10Ac1g02330 Beta vulgaris HOM05D006480 ORTHO05D008072 4.7e-54 214.5 130 79.2
AT1G10030 Arabidopsis thaliana HOM05D006480 ORTHO05D008072 6.1e-54 214.2 127 81.1
ClCG11G014970 Citrullus lanatus HOM05D006480 ORTHO05D008072 1.0e-53 213.4 163 67.5
arahy.Tifrunner.gnm1.ann1.2A26X2 Arachis hypogaea HOM05D006480 ORTHO05D008072 1.8e-53 212.6 127 78.7
Thhalv10009099m.g Eutrema salsugineum HOM05D006480 ORTHO05D008072 1.8e-53 212.6 127 80.3
BcaC05g24816 Brassica carinata HOM05D006480 ORTHO05D008072 2.3e-53 212.2 127 79.5
A06p06730 Brassica napus HOM05D006480 ORTHO05D008072 2.3e-53 212.2 127 79.5
Gorai.009G223900 Gossypium raimondii HOM05D006480 ORTHO05D008072 3.0e-53 211.8 122 82.0
BcaC05g24814 Brassica carinata HOM05D006480 ORTHO05D008072 8.9e-53 210.3 127 78.7
C05p08210 Brassica napus HOM05D006480 ORTHO05D008072 8.9e-53 210.3 127 78.7
Carub.0001s0945 Capsella rubella HOM05D006480 ORTHO05D008072 1.2e-52 209.9 120 83.3
BcaC07g38564 Brassica carinata HOM05D006480 ORTHO05D008072 1.5e-52 209.5 127 79.5
CARHR010140 Cardamine hirsuta HOM05D006480 ORTHO05D008072 2.6e-52 208.8 127 77.2
A08p34230 Brassica napus HOM05D006480 ORTHO05D008072 3.4e-52 208.4 127 79.5
BraA08t35335Z Brassica rapa HOM05D006480 ORTHO05D008072 3.4e-52 208.4 127 79.5
Oeu000749.3 Olea europaea HOM05D006480 ORTHO05D008072 7.5e-52 207.2 111 89.2
MELO3C003481.2 Cucumis melo HOM05D006480 ORTHO05D008072 1.7e-51 206.1 108 91.7
Sp1g08680 Schrenkiella parvula HOM05D006480 ORTHO05D008072 1.7e-51 206.1 127 77.2
BolC5t29573H Brassica oleracea HOM05D006480 ORTHO05D008072 3.7e-51 204.9 130 76.9
BolC8t48966H Brassica oleracea HOM05D006480 ORTHO05D008072 1.4e-50 203.0 129 77.5
MD10G1112500 Malus domestica HOM05D006480 ORTHO05D008072 1.2e-49 199.9 125 76.0
FAN24G1468 Fragaria x ananassa HOM05D006480 ORTHO05D008072 2.0e-49 199.1 118 81.4
vmacro21395 Vaccinium macrocarpon HOM05D006480 ORTHO05D008072 3.5e-49 198.4 108 88.0
FAN27G3220 Fragaria x ananassa HOM05D006480 ORTHO05D008072 7.8e-49 197.2 108 86.1
Gorai.010G029400 Gossypium raimondii HOM05D006480 ORTHO05D008072 1.3e-48 196.4 108 86.1
QL12p040680 Quercus lobata HOM05D006480 ORTHO05D008072 2.3e-48 195.7 124 79.0
Sabra02G0089000 Salix brachista HOM05D006480 ORTHO05D008072 3.9e-48 194.9 112 83.9
Hund05252 Selenicereus undatus HOM05D006480 ORTHO05D008072 3.9e-48 194.9 111 84.7
C08p13360 Brassica napus HOM05D006480 ORTHO05D008072 6.6e-48 194.1 128 75.0
Gohir.A06G027600 Gossypium hirsutum HOM05D006480 ORTHO05D008072 8.6e-48 193.7 107 86.0
BraA06t23887Z Brassica rapa HOM05D006480 ORTHO05D008072 1.1e-47 193.4 162 63.0
Atru.chr13.908 Acer truncatum HOM05D006480 ORTHO05D008072 1.9e-47 192.6 108 86.1
VMungo1309G2678 Vigna mungo HOM05D006480 ORTHO05D008072 2.5e-47 192.2 143 68.5
arahy.Tifrunner.gnm1.ann1.27XHB7 Arachis hypogaea HOM05D006480 ORTHO05D008072 1.4e-45 186.4 119 75.6
Aa31LG1G4870 Aethionema arabicum HOM05D006480 ORTHO05D008072 1.5e-44 183.0 107 82.2
Lj5A222T80 Lonicera japonica HOM05D006480 ORTHO05D008072 2.0e-44 182.6 109 81.7
Mapoly0019s0092 Marchantia polymorpha HOM05D006480 ORTHO05D008072 1.7e-43 179.5 118 70.3
Dinv09524 Davidia involucrata HOM05D006480 ORTHO05D008072 3.7e-43 178.3 99 86.9
Thecc.02G032200 Theobroma cacao HOM05D006480 ORTHO05D008072 1.6e-41 172.9 125 67.2
SMO112G0018 Selaginella moellendorffii HOM05D006480 ORTHO05D008072 1.7e-40 169.5 110 73.6
Nitab4.5_0002415g0030 Nicotiana tabacum HOM05D006480 ORTHO05D008072 4.7e-38 161.4 92 84.8
CARHR010030 Cardamine hirsuta HOM05D006480 ORTHO05D008072 1.2e-33 146.7 89 75.3
AagrBONN_evm.TU.Sc2ySwM_228.4946 Anthoceros agrestis HOM05D006480 ORTHO05D008072 2.3e-32 142.5 116 57.8
Zm00001eb129300 Zea mays HOM05D006480 ORTHO05D008072 1.1e-31 140.2 125 55.2
Zm00001eb116080 Zea mays HOM05D006480 ORTHO05D008072 4.3e-31 138.3 120 57.5
Zm00001eb116100 Zea mays HOM05D006480 ORTHO05D008072 4.3e-31 138.3 120 57.5
Zm00001eb129140 Zea mays HOM05D006480 ORTHO05D008072 1.6e-30 136.3 125 55.2
Zm00001eb409710 Zea mays HOM05D006480 ORTHO05D008072 1.2e-28 130.2 118 54.2
Zm00001eb129210 Zea mays HOM05D006480 ORTHO05D008072 2.7e-25 119.0 108 53.7
CBR_g29820 Chara braunii HOM05D006480 ORTHO05D008072 1.3e-24 116.7 120 44.2
CBR_g8921 Chara braunii HOM05D001598 ORTHO05D002757 1.3e-24 116.7 120 45.8
Pp3c19_15780 Physcomitrium patens HOM05D006480 ORTHO05D008072 1.7e-24 116.3 81 64.2
Duzib041G0452 Durio zibethinus HOM05D006480 ORTHO05D008072 4.3e-23 111.7 75 70.7


User provided reference genes

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