Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold152G36867 Striga asiatica HOM05D008077 ORTHO05D010221 1.8e-93 345.9 171 100.0
MSTRG.22201 Avicennia marina HOM05D008077 ORTHO05D010221 1.2e-33 147.1 136 55.9
Dinv39194 Davidia involucrata HOM05D008077 ORTHO05D010221 1.8e-24 116.7 149 45.6
Dinv44921 Davidia involucrata HOM05D008077 ORTHO05D010221 3.3e-23 112.5 93 57.0
Hma1.2p1_4204F.1_g338450 Hydrangea macrophylla HOM05D008077 ORTHO05D010221 4.3e-23 112.1 136 47.1
Actinidia10235 Actinidia chinensis HOM05D008077 ORTHO05D010221 1.1e-21 107.5 117 47.0
CSS0006446 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 1.4e-21 107.1 137 46.0
unitig_578.g16165 Utricularia gibba HOM05D008077 ORTHO05D010221 2.4e-21 106.3 99 51.5
Actinidia19284 Actinidia chinensis HOM05D008077 ORTHO05D010221 3.1e-21 105.9 95 53.7
PSO541G6554 Papaver somniferum HOM05D008077 ORTHO05D010221 1.5e-20 103.6 135 44.4
CSS0048473 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 2.0e-20 103.2 87 58.6
Migut.N02805 Erythranthe guttata HOM05D008077 ORTHO05D010221 2.6e-20 102.8 104 51.0
Duzib116G0694 Durio zibethinus HOM05D008077 ORTHO05D010221 7.6e-20 101.3 146 41.8
QL09p016211 Quercus lobata HOM05D008077 ORTHO05D010221 3.8e-19 99.0 87 49.4
CiPaw.08G053400 Carya illinoinensis HOM05D008077 ORTHO05D010221 8.4e-19 97.8 105 42.9
Gorai.002G137100 Gossypium raimondii HOM05D008077 ORTHO05D010221 1.1e-18 97.4 134 40.3
TWI56G0834 Tripterygium wilfordii HOM05D008077 ORTHO05D010221 1.1e-18 97.4 107 43.9
Haze_22366 Corylus avellana HOM05D008077 ORTHO05D010221 1.4e-18 97.1 135 40.7
Cfa013722 Carpinus fangiana HOM05D008077 ORTHO05D010221 3.2e-18 95.9 138 39.9
Oeu048561.1 Olea europaea HOM05D008077 ORTHO05D010221 4.2e-18 95.5 71 67.6
TAR376G0563 Trochodendron aralioides HOM05D008077 ORTHO05D010221 5.5e-18 95.1 110 45.5
Nn6g34549 Nelumbo nucifera HOM05D008077 ORTHO05D010221 7.1e-18 94.7 93 47.3
Ciclev10002390m.g Citrus clementina HOM05D008077 ORTHO05D010221 9.3e-18 94.4 139 38.8
Cc10_g07800 Coffea canephora HOM05D008077 ORTHO05D010221 9.3e-18 94.4 131 44.3
GSVIVG01009281001 Vitis vinifera HOM05D008077 ORTHO05D010221 9.3e-18 94.4 100 43.0
FvH4_2g32450 Fragaria vesca HOM05D008077 ORTHO05D010221 1.2e-17 94.0 115 42.6
FAN24G1375 Fragaria x ananassa HOM05D008077 ORTHO05D010221 1.2e-17 94.0 115 42.6
Gohir.D01G112200 Gossypium hirsutum HOM05D008077 ORTHO05D010221 1.2e-17 94.0 134 39.6
Potri.005G149500 Populus trichocarpa HOM05D008077 ORTHO05D010221 1.2e-17 94.0 82 52.4
PSO675G3170 Papaver somniferum HOM05D008077 ORTHO05D010221 1.6e-17 93.6 100 47.0
COL.COLO4_28429 Corchorus olitorius HOM05D008077 ORTHO05D010221 2.1e-17 93.2 105 45.7
Glyma.14G090800 Glycine max HOM05D008077 ORTHO05D010221 2.1e-17 93.2 89 49.4
Thecc.08G082700 Theobroma cacao HOM05D008077 ORTHO05D010221 3.5e-17 92.4 138 37.7
EL10Ac1g02339 Beta vulgaris HOM05D008077 ORTHO05D010221 4.6e-17 92.0 137 38.0
FAN20G1346 Fragaria x ananassa HOM05D008077 ORTHO05D010221 4.6e-17 92.0 115 42.6
RcHm_v2.0_Chr6g0310221 Rosa chinensis HOM05D008077 ORTHO05D010221 4.6e-17 92.0 148 39.9
Atru.chr13.887 Acer truncatum HOM05D008077 ORTHO05D010221 6.0e-17 91.7 126 43.7
Eucgr.F02208 Eucalyptus grandis HOM05D008077 ORTHO05D010221 6.0e-17 91.7 104 41.3
Glyma.17G232225 Glycine max HOM05D008077 ORTHO05D010221 1.0e-16 90.9 87 49.4
PGR031G0263 Punica granatum HOM05D008077 ORTHO05D010221 1.0e-16 90.9 87 42.5
MD08G1076300 Malus domestica HOM05D008077 ORTHO05D010221 3.0e-16 89.4 139 40.3
AUR62039341 Chenopodium quinoa HOM05D008077 ORTHO05D010221 5.1e-16 88.6 99 43.4
Sabra05G0118800 Salix brachista HOM05D008077 ORTHO05D010221 5.1e-16 88.6 84 51.2
Lj5g0022198 Lotus japonicus HOM05D008077 ORTHO05D010221 6.7e-16 88.2 135 37.0
Sc02g0008240 Simmondsia chinensis HOM05D008077 ORTHO05D010221 1.1e-15 87.4 84 47.6
Gohir.A01G124500 Gossypium hirsutum HOM05D008077 ORTHO05D010221 1.9e-15 86.7 134 38.8
AUR62034975 Chenopodium quinoa HOM05D008077 ORTHO05D010221 3.3e-15 85.9 87 46.0
Prupe.1G417600 Prunus persica HOM05D008077 ORTHO05D010221 3.3e-15 85.9 92 45.7
Lalb_Chr14g0367971 Lupinus albus HOM05D008077 ORTHO05D010221 4.3e-15 85.5 138 37.0
FAN27G3028 Fragaria x ananassa HOM05D008077 ORTHO05D010221 5.7e-15 85.1 165 36.4
Phvul.001G032000 Phaseolus vulgaris HOM05D008077 ORTHO05D010221 9.6e-15 84.3 101 40.6
FAN15G0649 Fragaria x ananassa HOM05D008077 ORTHO05D010221 1.6e-14 83.6 115 40.9
VMungo0647G0255 Vigna mungo HOM05D008077 ORTHO05D010221 1.6e-14 83.6 86 44.2
Ca_06992_v3 Cicer arietinum L. HOM05D008077 ORTHO05D010221 2.1e-14 83.2 95 42.1
Manes.18G051200 Manihot esculenta HOM05D008077 ORTHO05D010221 2.8e-14 82.8 130 36.9
Hund05263 Selenicereus undatus HOM05D008077 ORTHO05D010221 2.8e-14 82.8 95 43.2
arahy.Tifrunner.gnm1.ann1.PWM57A Arachis hypogaea HOM05D008077 ORTHO05D010221 3.7e-14 82.4 85 44.7
arahy.Tifrunner.gnm1.ann1.JS0EE0 Arachis hypogaea HOM05D008077 ORTHO05D010221 4.8e-14 82.0 85 44.7
ClCG05G017630 Citrullus lanatus HOM05D008077 ORTHO05D010221 4.8e-14 82.0 87 47.1
MELO3C016846.2 Cucumis melo HOM05D008077 ORTHO05D010221 8.2e-14 81.3 138 39.9
MBI16_g09811_MAGBIO Magnolia biondii HOM05D008077 ORTHO05D010221 1.1e-13 80.9 107 38.3
CsaV3_4G035360 Cucumis sativus L. HOM05D008077 ORTHO05D010221 1.4e-13 80.5 138 40.6
CDE06G2465 Ceratophyllum demersum HOM05D008077 ORTHO05D010221 2.0e-12 76.6 92 40.2
Medtr1g017160 Medicago truncatula HOM05D008077 ORTHO05D010221 3.4e-12 75.9 85 40.0
TPR.G13063 Trifolium pratense HOM05D008077 ORTHO05D010221 1.3e-11 73.9 92 40.2
CANSAT25G0587 Cannabis sativa HOM05D008077 ORTHO05D010221 2.2e-11 73.2 141 32.6
Psat6g018560 Pisum sativum HOM05D008077 ORTHO05D010221 6.5e-11 71.6 74 44.6
THA.LOC104806984 Tarenaya hassleriana HOM05D008077 ORTHO05D010221 5.1e-08 62.0 60 41.7
Sed0028055 Sechium edule HOM05D008077 ORTHO05D010221 2.5e-07 59.7 53 54.7


User provided reference genes

Program Settings