Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold152G36821 Striga asiatica HOM05D008585 ORTHO05D000397 1.5e-74 282.7 141 100.0
SGA_v2.0_scaffold448G51779 Striga asiatica HOM05D008585 ORTHO05D000397 1.9e-64 249.2 131 94.7
SGA_v2.0_scaffold16G07582 Striga asiatica HOM05D008585 ORTHO05D000397 1.5e-61 239.6 131 90.1
SGA_v2.0_scaffold9G04779 Striga asiatica HOM05D008585 ORTHO05D000397 3.3e-61 238.4 131 90.1
SGA_v2.0_scaffold18G08386 Striga asiatica HOM05D008585 ORTHO05D000397 1.2e-58 229.9 131 88.5
SGA_v2.0_scaffold61G21229 Striga asiatica HOM05D008585 ORTHO05D000397 9.6e-53 210.3 112 92.0
SGA_v2.0_scaffold148G36401 Striga asiatica HOM05D008585 ORTHO05D000397 2.6e-50 202.2 119 84.0
SGA_v2.0_scaffold491G52433 Striga asiatica HOM05D008585 ORTHO05D000397 6.4e-49 197.6 119 83.2
SGA_v2.0_scaffold3G01660 Striga asiatica HOM05D008585 ORTHO05D000397 5.5e-48 194.5 120 78.3
SGA_v2.0_scaffold5G03055 Striga asiatica HOM05D008585 ORTHO05D000397 1.8e-46 189.5 121 76.0
SGA_v2.0_scaffold35G14138 Striga asiatica HOM05D008585 ORTHO05D000397 1.5e-45 186.4 120 75.0
SGA_v2.0_scaffold162G37930 Striga asiatica HOM05D008585 ORTHO05D000397 7.6e-42 174.1 109 79.8
SGA_v2.0_scaffold164G38150 Striga asiatica HOM05D008585 ORTHO05D000397 9.6e-37 157.1 92 81.5
SGA_v2.0_scaffold91G28036 Striga asiatica HOM05D008585 ORTHO05D000397 7.6e-34 147.5 108 64.8
SGA_v2.0_scaffold63G21779 Striga asiatica HOM05D008585 ORTHO05D000397 2.2e-33 146.0 105 64.8
SGA_v2.0_scaffold304G47894 Striga asiatica HOM05D008585 ORTHO05D000397 3.2e-32 142.1 119 55.5
SGA_v2.0_scaffold12G06039 Striga asiatica HOM05D008585 ORTHO05D000397 5.5e-32 141.4 119 58.0
SGA_v2.0_scaffold148G36424 Striga asiatica HOM05D008585 ORTHO05D000397 9.3e-32 140.6 119 57.1
SGA_v2.0_scaffold137G35092 Striga asiatica HOM05D008585 ORTHO05D000397 1.2e-31 140.2 119 56.3
SGA_v2.0_scaffold41G15715 Striga asiatica HOM05D008585 ORTHO05D000397 3.6e-31 138.7 119 56.3
SGA_v2.0_scaffold449G51795 Striga asiatica HOM05D008585 ORTHO05D000397 6.3e-28 127.9 91 64.8
SGA_v2.0_scaffold21G09322 Striga asiatica HOM05D008585 ORTHO05D000397 2.4e-19 99.4 101 49.5
SGA_v2.0_scaffold91G28089 Striga asiatica HOM05D008585 ORTHO05D000397 8.5e-17 90.9 77 51.9
SGA_v2.0_scaffold65G22152 Striga asiatica HOM05D008585 ORTHO05D000397 1.4e-16 90.1 77 51.9
Oeu041493.2 Olea europaea HOM05D008585 ORTHO05D000397 7.9e-15 84.3 112 40.2
Oeu064355.1 Olea europaea HOM05D008585 ORTHO05D000397 7.9e-15 84.3 112 40.2
Ciclev10003531m.g Citrus clementina HOM05D002262 ORTHO05D000482 3.3e-13 79.0 96 37.5
Oeu029820.1 Olea europaea HOM05D008585 ORTHO05D000397 3.7e-12 75.5 106 39.6
Oeu058706.1 Olea europaea HOM05D008585 ORTHO05D000397 3.7e-12 75.5 106 39.6
SGA_v2.0_scaffold5241G54611 Striga asiatica HOM05D008585 ORTHO05D000397 1.4e-11 73.6 43 81.4
Oeu000023.2 Olea europaea HOM05D002262 ORTHO05D000482 1.6e-10 70.1 103 33.0
Oeu021073.1 Olea europaea HOM05D006164 ORTHO05D001269 3.5e-10 68.9 100 34.0
Oeu039421.1 Olea europaea HOM05D006164 ORTHO05D001269 7.7e-10 67.8 100 34.0
Oeu046589.1 Olea europaea HOM05D000700 ORTHO05D000397 5.0e-09 65.1 105 40.0
Nitab4.5_0001863g0140 Nicotiana tabacum HOM05D005063 ORTHO05D000482 8.5e-09 64.3 104 26.9
Oeu046913.1 Olea europaea HOM05D000700 ORTHO05D000397 8.5e-09 64.3 105 39.0
Nitab4.5_0003911g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.5e-08 63.5 86 31.4
Oeu047399.1 Olea europaea HOM05D007816 ORTHO05D000397 2.5e-08 62.8 75 37.3
Nitab4.5_0011961g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.2e-08 62.4 104 26.9
Oeu005447.1 Olea europaea HOM05D006164 ORTHO05D001269 3.2e-08 62.4 102 34.3
Nitab4.5_0002951g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.2e-08 62.0 92 28.3
CANSAT54G1962 Cannabis sativa HOM05D009344 ORTHO05D001269 5.5e-08 61.6 67 46.3
SGA_v2.0_scaffold152G36827 Striga asiatica HOM05D008585 ORTHO05D000397 7.2e-08 61.2 55 49.1
CANSAT11G2391 Cannabis sativa HOM05D009344 ORTHO05D001269 9.4e-08 60.8 85 37.6
Oeu027805.1 Olea europaea HOM05D000700 ORTHO05D000397 9.4e-08 60.8 101 32.7
HanXRQChr04g0099521 Helianthus annuus HOM05D010915 ORTHO05D010404 1.2e-07 60.5 108 34.3
Sopen06g002980 Solanum pennellii HOM05D005063 ORTHO05D000482 1.2e-07 60.5 119 26.9
PGSC0003DMG400014694 Solanum tuberosum HOM05D005063 ORTHO05D000482 1.6e-07 60.1 119 27.7
Solyc06g008150.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 2.7e-07 59.3 119 26.9
CANSAT25G1815 Cannabis sativa HOM05D009344 ORTHO05D001269 4.7e-07 58.5 67 43.3
CANSAT56G2811 Cannabis sativa HOM05D002262 ORTHO05D000482 4.7e-07 58.5 97 29.9
Oeu020909.1 Olea europaea HOM05D000700 ORTHO05D000397 4.7e-07 58.5 91 38.5
CANSAT54G1637 Cannabis sativa HOM05D009344 ORTHO05D001269 6.1e-07 58.2 85 36.5
BcaC07g37297 Brassica carinata HOM05D000977 ORTHO05D001094 8.0e-07 57.8 95 31.6
Ciclev10019150m.g Citrus clementina HOM05D007816 ORTHO05D000482 8.0e-07 57.8 87 31.0
Oeu062686.1 Olea europaea HOM05D007816 ORTHO05D000397 8.0e-07 57.8 71 39.4
CANSAT35G1168 Cannabis sativa HOM05D002262 ORTHO05D000482 1.4e-06 57.0 97 28.9
CANSAT54G0857 Cannabis sativa HOM05D002262 ORTHO05D000482 1.4e-06 57.0 97 28.9
CANSAT54G1872 Cannabis sativa HOM05D002262 ORTHO05D000482 1.4e-06 57.0 97 28.9
Oeu041703.1 Olea europaea HOM05D000700 ORTHO05D000397 1.4e-06 57.0 87 35.6
TWI75G0282 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.4e-06 57.0 89 32.6
Ciclev10020564m.g Citrus clementina HOM05D007816 ORTHO05D000397 1.8e-06 56.6 87 29.9
Oeu038952.1 Olea europaea HOM05D000700 ORTHO05D000397 2.3e-06 56.2 83 38.6
SGA_v2.0_scaffold281G46892 Striga asiatica HOM05D011754 ORTHO05D014689 2.3e-06 56.2 40 60.0
BcaC07g36913 Brassica carinata HOM05D000977 ORTHO05D001094 3.0e-06 55.8 89 32.6
TWI59G0262 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.0e-06 55.8 89 32.6
Nitab4.5_0009218g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.0e-06 55.5 84 29.8
BcaC09g49808 Brassica carinata HOM05D000977 ORTHO05D001094 5.2e-06 55.1 95 30.5
BolC1t04278H Brassica oleracea HOM05D000977 ORTHO05D001094 5.2e-06 55.1 95 30.5
CANSAT56G1481 Cannabis sativa HOM05D009472 ORTHO05D000482 5.2e-06 55.1 134 26.1
CANSAT80G2652 Cannabis sativa HOM05D023333 ORTHO05D000137 5.2e-06 55.1 120 30.0
Nitab4.5_0005016g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.2e-06 55.1 85 30.6
BcaB03g14367 Brassica carinata HOM05D000977 ORTHO05D001094 6.7e-06 54.7 95 30.5
BcaC06g35365 Brassica carinata HOM05D000977 ORTHO05D001094 6.7e-06 54.7 95 30.5
Nitab4.5_0001927g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 6.7e-06 54.7 89 28.1
Oeu025552.1 Olea europaea HOM05D056594 ORTHO05D049460 6.7e-06 54.7 56 41.1
CANSAT01G1142 Cannabis sativa HOM05D009472 ORTHO05D000482 8.8e-06 54.3 133 26.3


User provided reference genes

Program Settings