Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold151G36758 Striga asiatica HOM05D006041 ORTHO05D007473 2.4e-122 442.2 223 100.0
SGA_v2.0_scaffold151G36726 Striga asiatica HOM05D006041 ORTHO05D007473 6.5e-88 327.8 223 78.5
SGA_v2.0_scaffold139G35400 Striga asiatica HOM05D006041 ORTHO05D007473 2.2e-59 233.0 225 57.3
Hma1.2p1_0089F.1_g045430 Hydrangea macrophylla HOM05D006041 ORTHO05D007473 1.5e-55 220.3 240 52.5
Rhsim09G0037900 Rhododendron simsii HOM05D006041 ORTHO05D007473 2.1e-54 216.5 234 52.1
Dinv26256 Davidia involucrata HOM05D006041 ORTHO05D007473 6.2e-54 214.9 235 50.2
MSTRG.2140 Avicennia marina HOM05D006041 ORTHO05D007473 1.1e-53 214.2 226 54.0
SalBow2G0340 Salvia bowleyana HOM05D006041 ORTHO05D007473 3.1e-53 212.6 222 48.6
Migut.E00465 Erythranthe guttata HOM05D006041 ORTHO05D007473 8.9e-53 211.1 227 52.0
Oeu016281.1 Olea europaea HOM05D006041 ORTHO05D007473 2.9e-51 206.1 232 49.6
Oeu063578.1 Olea europaea HOM05D006041 ORTHO05D007473 4.9e-51 205.3 237 49.8
Haze_10912 Corylus avellana HOM05D006041 ORTHO05D007473 1.1e-50 204.1 230 48.7
Haze_10913 Corylus avellana HOM05D006041 ORTHO05D007473 1.1e-50 204.1 230 48.7
Cfa015002 Carpinus fangiana HOM05D006041 ORTHO05D007473 3.2e-50 202.6 230 47.4
Lj6A740T67 Lonicera japonica HOM05D006041 ORTHO05D007473 3.2e-50 202.6 231 48.1
vmacro00556 Vaccinium macrocarpon HOM05D006041 ORTHO05D007473 3.5e-49 199.1 232 47.8
Dinv18641 Davidia involucrata HOM05D006041 ORTHO05D007473 3.0e-48 196.1 269 42.8
CsaV3_5G028000 Cucumis sativus L. HOM05D006041 ORTHO05D007473 6.6e-48 194.9 232 47.4
CSS0021041 Camellia sinensis var. sinensis HOM05D006041 ORTHO05D007473 8.6e-48 194.5 241 46.9
CSS0021655 Camellia sinensis var. sinensis HOM05D006041 ORTHO05D007473 8.6e-48 194.5 241 46.9
Lsat_1_v5_gn_8_45641 Lactuca sativa HOM05D006041 ORTHO05D007473 8.6e-48 194.5 227 48.0
CiPaw.05G190300 Carya illinoinensis HOM05D006041 ORTHO05D007473 3.3e-47 192.6 231 47.2
Manes.15G133200 Manihot esculenta HOM05D006041 ORTHO05D007473 3.3e-47 192.6 238 45.8
COL.COLO4_16567 Corchorus olitorius HOM05D006041 ORTHO05D007473 5.6e-47 191.8 240 47.5
MELO3C005281.2 Cucumis melo HOM05D006041 ORTHO05D007473 7.3e-47 191.4 232 46.6
QL03p034952 Quercus lobata HOM05D006041 ORTHO05D007473 2.1e-46 189.9 244 45.5
Nn4g24305 Nelumbo nucifera HOM05D006041 ORTHO05D007473 2.8e-46 189.5 230 47.8
Cc11_g08020 Coffea canephora HOM05D006041 ORTHO05D007473 4.7e-46 188.7 235 44.7
Lalb_Chr05g0222281 Lupinus albus HOM05D006041 ORTHO05D007473 4.7e-46 188.7 230 46.5
AUR62003915 Chenopodium quinoa HOM05D006041 ORTHO05D007473 1.1e-45 187.6 245 44.1
Cpa.g.c27573.2 Carica papaya HOM05D006041 ORTHO05D007473 1.4e-45 187.2 243 43.2
ClCG01G006460 Citrullus lanatus HOM05D006041 ORTHO05D007473 4.0e-45 185.7 229 46.3
FvH4_4g33820 Fragaria vesca HOM05D006041 ORTHO05D007473 4.0e-45 185.7 222 47.3
Gorai.005G158800 Gossypium raimondii HOM05D006041 ORTHO05D007473 4.0e-45 185.7 239 45.2
Potri.008G133700 Populus trichocarpa HOM05D006041 ORTHO05D007473 4.0e-45 185.7 243 46.1
PGR142G4228 Punica granatum HOM05D006041 ORTHO05D007473 8.9e-45 184.5 241 43.6
Thecc.02G290600 Theobroma cacao HOM05D006041 ORTHO05D007473 1.2e-44 184.1 246 46.7
Solyc01g005430.3 Solanum lycopersicum HOM05D006041 ORTHO05D007473 2.6e-44 183.0 224 50.0
TWI74G1002 Tripterygium wilfordii HOM05D006041 ORTHO05D007473 3.4e-44 182.6 237 43.0
DCAR_007323 Daucus carota HOM05D006041 ORTHO05D007473 5.8e-44 181.8 247 42.9
Gohir.D02G141500 Gossypium hirsutum HOM05D006041 ORTHO05D007473 5.8e-44 181.8 241 44.4
FAN17G0347 Fragaria x ananassa HOM05D006041 ORTHO05D007473 9.9e-44 181.0 226 46.5
Sc03g0001760 Simmondsia chinensis HOM05D006041 ORTHO05D007473 9.9e-44 181.0 253 43.9
FAN12G3784 Fragaria x ananassa HOM05D006041 ORTHO05D007473 1.3e-43 180.6 223 43.9
RcHm_v2.0_Chr4g0443331 Rosa chinensis HOM05D006041 ORTHO05D007473 1.3e-43 180.6 234 44.0
Sabra08G0102300 Salix brachista HOM05D006041 ORTHO05D007473 1.3e-43 180.6 239 42.7
Glyma.08G042900 Glycine max HOM05D006041 ORTHO05D007473 1.7e-43 180.3 229 44.5
Actinidia34032 Actinidia chinensis HOM05D006041 ORTHO05D007473 2.2e-43 179.9 245 46.5
HanXRQChr08g0212441 Helianthus annuus HOM05D006041 ORTHO05D007473 2.9e-43 179.5 235 46.0
Nitab4.5_0009602g0010 Nicotiana tabacum HOM05D006041 ORTHO05D007473 2.9e-43 179.5 234 45.3
FAN22G1094 Fragaria x ananassa HOM05D006041 ORTHO05D007473 8.4e-43 177.9 227 44.5
Medtr8g104930 Medicago truncatula HOM05D006041 ORTHO05D007473 8.4e-43 177.9 230 43.5
Phvul.002G319700 Phaseolus vulgaris HOM05D006041 ORTHO05D007473 1.4e-42 177.2 230 44.8
ECA233G3443 Erigeron canadensis HOM05D006041 ORTHO05D007473 1.9e-42 176.8 240 44.2
TAR629G0174 Trochodendron aralioides HOM05D006041 ORTHO05D007473 2.4e-42 176.4 234 43.2
unitig_27.g25310 Utricularia gibba HOM05D006041 ORTHO05D007473 2.4e-42 176.4 229 45.9
Sopen01g001440 Solanum pennellii HOM05D006041 ORTHO05D007473 7.1e-42 174.9 223 47.1
TAR371G0590 Trochodendron aralioides HOM05D006041 ORTHO05D007473 7.1e-42 174.9 236 44.1
VMungo0251G2799 Vigna mungo HOM05D006041 ORTHO05D007473 7.1e-42 174.9 230 45.7
EL10Ac6g15713 Beta vulgaris HOM05D006041 ORTHO05D007473 1.2e-41 174.1 265 39.2
PGSC0003DMG400032118 Solanum tuberosum HOM05D006041 ORTHO05D007473 1.2e-41 174.1 223 48.9
Gohir.A01G147900 Gossypium hirsutum HOM05D006041 ORTHO05D007473 2.1e-41 173.3 238 43.7
Nitab4.5_0000238g0060 Nicotiana tabacum HOM05D006041 ORTHO05D007473 2.1e-41 173.3 225 47.1
Duzib268G1057 Durio zibethinus HOM05D006041 ORTHO05D007473 6.0e-41 171.8 236 41.9
Eucgr.G02114 Eucalyptus grandis HOM05D006041 ORTHO05D007473 6.0e-41 171.8 234 41.9
Aa31LG2G8250 Aethionema arabicum HOM05D006041 ORTHO05D007473 7.8e-41 171.4 235 42.1
arahy.Tifrunner.gnm1.ann1.BAL5EB Arachis hypogaea HOM05D006041 ORTHO05D007473 1.0e-40 171.0 226 44.2
Duzib251G0740 Durio zibethinus HOM05D006041 ORTHO05D007473 1.3e-40 170.6 234 42.7
arahy.Tifrunner.gnm1.ann1.IVEQ23 Arachis hypogaea HOM05D006041 ORTHO05D007473 2.3e-40 169.9 224 44.6
Gohir.A03G117900 Gossypium hirsutum HOM05D006041 ORTHO05D007473 3.0e-40 169.5 245 42.9
Lj4g0006027 Lotus japonicus HOM05D006041 ORTHO05D007473 3.0e-40 169.5 228 41.2
MBI19_g21093_MAGBIO Magnolia biondii HOM05D006041 ORTHO05D007473 5.1e-40 168.7 228 43.0
Glyma.05G235400 Glycine max HOM05D006041 ORTHO05D007473 1.5e-39 167.2 230 42.2
THA.LOC104805081 Tarenaya hassleriana HOM05D006041 ORTHO05D007473 1.5e-39 167.2 241 40.2
Carub.0005s0060 Capsella rubella HOM05D006041 ORTHO05D007473 2.5e-39 166.4 242 41.3
C07p32270 Brassica napus HOM05D006041 ORTHO05D007473 3.3e-39 166.0 233 43.3
AUR62038228 Chenopodium quinoa HOM05D006041 ORTHO05D007473 3.3e-39 166.0 232 45.3
AT2G01650 Arabidopsis thaliana HOM05D006041 ORTHO05D007473 4.3e-39 165.6 229 41.5
Psat7g009240 Pisum sativum HOM05D006041 ORTHO05D007473 5.6e-39 165.2 226 42.0
Thhalv10004151m.g Eutrema salsugineum HOM05D006041 ORTHO05D007473 7.3e-39 164.9 242 41.3
BolC7t43765H Brassica oleracea HOM05D006041 ORTHO05D007473 1.2e-38 164.1 233 42.1
MD13G1029800 Malus domestica HOM05D006041 ORTHO05D007473 2.1e-38 163.3 254 39.4
ATR0753G012 Amborella trichopoda HOM05D006041 ORTHO05D007473 2.8e-38 162.9 238 40.8
BcaC06g34139 Brassica carinata HOM05D006041 ORTHO05D007473 2.8e-38 162.9 233 41.6
Sp2g13100 Schrenkiella parvula HOM05D006041 ORTHO05D007473 2.8e-38 162.9 230 41.7
Ah.03g145700 Amaranthus hybridus HOM05D006041 ORTHO05D007473 3.6e-38 162.5 248 38.3
AL5G10750 Arabidopsis lyrata HOM05D006041 ORTHO05D007473 3.6e-38 162.5 238 39.9
CARHR144220 Cardamine hirsuta HOM05D006041 ORTHO05D007473 3.6e-38 162.5 234 42.3
Prupe.1G331600 Prunus persica HOM05D006041 ORTHO05D007473 8.1e-38 161.4 233 41.6
Gorai.002G173400 Gossypium raimondii HOM05D006041 ORTHO05D007473 1.1e-37 161.0 241 39.0
Gohir.D01G141100 Gossypium hirsutum HOM05D006041 ORTHO05D007473 2.4e-37 159.8 241 38.6
CANSAT01G0691 Cannabis sativa HOM05D006041 ORTHO05D007473 4.0e-37 159.1 227 41.9
Ciclev10015068m.g Citrus clementina HOM05D006041 ORTHO05D007473 5.2e-37 158.7 240 38.3
BraA06t27296Z Brassica rapa HOM05D006041 ORTHO05D007473 1.2e-36 157.5 232 42.2
BcaC06g31287 Brassica carinata HOM05D006041 ORTHO05D007473 4.4e-36 155.6 234 41.5
Ca_17289_v3 Cicer arietinum L. HOM05D006041 ORTHO05D007473 5.8e-36 155.2 229 40.6
A06p44210 Brassica napus HOM05D006041 ORTHO05D007473 9.9e-36 154.5 230 41.3
MD16G1020600 Malus domestica HOM05D006041 ORTHO05D007473 1.7e-35 153.7 251 38.6
PSO478G4621 Papaver somniferum HOM05D006041 ORTHO05D007473 2.9e-35 152.9 236 39.8
Atru.chr11.510 Acer truncatum HOM05D006041 ORTHO05D007473 1.1e-34 151.0 247 38.1
Manes.17G082400 Manihot esculenta HOM05D006041 ORTHO05D007473 1.1e-34 151.0 234 42.3
Peaxi162Scf00655g00023 Petunia axillaris HOM05D006041 ORTHO05D007473 1.1e-34 151.0 209 45.0
PSO017G0247 Papaver somniferum HOM05D006041 ORTHO05D007473 3.2e-34 149.4 236 39.0
CAN.G1130.10 Capsicum annuum HOM05D006041 ORTHO05D007473 4.2e-34 149.1 268 38.8
Sed0013468 Sechium edule HOM05D006041 ORTHO05D007473 2.7e-33 146.4 150 48.0
TPR.G32714 Trifolium pratense HOM05D006041 ORTHO05D007473 2.5e-31 139.8 142 49.3
Sed0015632 Sechium edule HOM05D006041 ORTHO05D007473 3.3e-31 139.4 237 39.7
SEGI_21307 Sequoiadendron giganteum HOM05D006041 ORTHO05D007473 1.6e-30 137.1 232 38.4
Lalb_Chr16g0387681 Lupinus albus HOM05D006041 ORTHO05D007473 1.4e-29 134.0 224 40.2
CDE07G0862 Ceratophyllum demersum HOM05D006041 ORTHO05D007473 5.3e-29 132.1 227 40.1
CDE06G1197 Ceratophyllum demersum HOM05D006041 ORTHO05D007473 3.0e-24 116.3 228 38.6
QL10p059701 Quercus lobata HOM05D006041 ORTHO05D007473 9.0e-21 104.8 178 38.2
Psat7g181280 Pisum sativum HOM05D006041 ORTHO05D007473 4.2e-18 95.9 108 46.3
Actinidia25876 Actinidia chinensis HOM05D001822 ORTHO05D001744 4.6e-17 92.4 99 48.5
Zm00001eb099250 Zea mays HOM05D006041 ORTHO05D007473 1.8e-16 90.5 221 31.7
Zm00001eb312180 Zea mays HOM05D006041 ORTHO05D007473 9.6e-15 84.7 221 31.2
Mapoly0081s0058 Marchantia polymorpha HOM05D006041 ORTHO05D007473 3.4e-12 76.3 151 31.8
Aqoxy3G00037 Aquilegia oxysepala HOM05D006041 ORTHO05D007473 2.9e-11 73.2 225 30.7
arahy.Tifrunner.gnm1.ann1.I8TFGP Arachis hypogaea HOM05D006041 ORTHO05D007473 2.9e-11 73.2 51 64.7
CBR_g3474 Chara braunii HOM05D006041 ORTHO05D007473 8.2e-06 55.1 49 42.9


User provided reference genes

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