Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold151G36714 Striga asiatica HOM05D007411 ORTHO05D009025 6.7e-111 404.1 210 100.0
SalBow2G3064 Salvia bowleyana HOM05D007411 ORTHO05D009025 2.6e-38 162.9 210 49.0
Migut.G00360 Erythranthe guttata HOM05D007411 ORTHO05D009025 7.6e-38 161.4 219 48.4
Hma1.2p1_1572F.1_g291440 Hydrangea macrophylla HOM05D007411 ORTHO05D009025 2.6e-30 136.3 167 46.7
Dinv14014 Davidia involucrata HOM05D007411 ORTHO05D009025 1.7e-29 133.7 173 47.4
Hma1.2p1_2201F.1_g317040 Hydrangea macrophylla HOM05D007411 ORTHO05D009025 1.7e-29 133.7 167 46.1
Prupe.1G017200 Prunus persica HOM05D007411 ORTHO05D009025 1.7e-29 133.7 216 41.7
Actinidia23528 Actinidia chinensis HOM05D007411 ORTHO05D009025 1.4e-28 130.6 154 47.4
Nitab4.5_0004062g0070 Nicotiana tabacum HOM05D007411 ORTHO05D009025 1.4e-28 130.6 130 49.2
Nitab4.5_0002307g0080 Nicotiana tabacum HOM05D007411 ORTHO05D009025 3.2e-28 129.4 127 51.2
CAN.G1094.25 Capsicum annuum HOM05D007411 ORTHO05D009025 3.5e-27 125.9 143 47.6
Sopen09g031190 Solanum pennellii HOM05D007411 ORTHO05D009025 7.9e-27 124.8 104 54.8
Solyc09g082310.2 Solanum lycopersicum HOM05D007411 ORTHO05D009025 3.9e-26 122.5 104 53.8
Peaxi162Scf00092g00336 Petunia axillaris HOM05D007411 ORTHO05D009025 4.8e-24 115.5 99 51.5
Nn6g34119 Nelumbo nucifera HOM05D007411 ORTHO05D009025 6.3e-24 115.2 183 42.6
MD13G1196400 Malus domestica HOM05D007411 ORTHO05D009025 1.8e-23 113.6 114 50.0
QL06p001698 Quercus lobata HOM05D007411 ORTHO05D009025 1.8e-23 113.6 145 42.8
FAN17G1166 Fragaria x ananassa HOM05D007411 ORTHO05D009025 7.7e-22 108.2 217 38.2
MD16G1196900 Malus domestica HOM05D007411 ORTHO05D009025 1.3e-21 107.5 93 52.7
Lsat_1_v5_gn_9_80381 Lactuca sativa HOM05D007411 ORTHO05D009025 2.2e-21 106.7 107 46.7
ECA236G4939 Erigeron canadensis HOM05D007411 ORTHO05D009025 2.9e-21 106.3 155 40.0
TWI09G1055 Tripterygium wilfordii HOM05D007411 ORTHO05D009025 2.9e-21 106.3 164 40.2
FAN12G4330 Fragaria x ananassa HOM05D007411 ORTHO05D009025 8.5e-21 104.8 189 39.2
Ciclev10006648m.g Citrus clementina HOM05D007411 ORTHO05D009025 1.1e-20 104.4 122 45.1
CiPaw.01G198400 Carya illinoinensis HOM05D007411 ORTHO05D009025 1.4e-20 104.0 186 38.2
arahy.Tifrunner.gnm1.ann1.SC2WWN Arachis hypogaea HOM05D007411 ORTHO05D009025 2.5e-20 103.2 193 39.9
FAN07G0509 Fragaria x ananassa HOM05D007411 ORTHO05D009025 2.5e-20 103.2 191 39.3
CSS0014995 Camellia sinensis var. sinensis HOM05D007411 ORTHO05D009025 4.2e-20 102.4 104 50.0
ClCG06G006330 Citrullus lanatus HOM05D007411 ORTHO05D009025 5.5e-20 102.1 150 40.7
FvH4_4g15980 Fragaria vesca HOM05D007411 ORTHO05D009025 5.5e-20 102.1 183 39.3
Cfa008473 Carpinus fangiana HOM05D007411 ORTHO05D009025 7.2e-20 101.7 102 49.0
PGR004G0639 Punica granatum HOM05D007411 ORTHO05D009025 9.4e-20 101.3 164 40.9
FAN22G0418 Fragaria x ananassa HOM05D007411 ORTHO05D009025 1.6e-19 100.5 187 40.1
arahy.Tifrunner.gnm1.ann1.UE7NK8 Arachis hypogaea HOM05D007411 ORTHO05D009025 2.1e-19 100.1 184 39.7
Sed0024167 Sechium edule HOM05D007411 ORTHO05D009025 2.1e-19 100.1 130 40.8
BraA05t20579Z Brassica rapa HOM05D007411 ORTHO05D009025 2.7e-19 99.8 211 34.6
Ca_24421_v3 Cicer arietinum L. HOM05D007411 ORTHO05D009025 2.7e-19 99.8 113 46.0
AL7G41060 Arabidopsis lyrata HOM05D007411 ORTHO05D009025 6.1e-19 98.6 185 36.2
BraA05t20476Z Brassica rapa HOM05D007411 ORTHO05D009025 6.1e-19 98.6 210 32.9
DCAR_027228 Daucus carota HOM05D002080 ORTHO05D002062 6.1e-19 98.6 91 47.3
THA.LOC104808560 Tarenaya hassleriana HOM05D007411 ORTHO05D009025 7.9e-19 98.2 159 39.6
A05p16750 Brassica napus HOM05D007411 ORTHO05D009025 1.0e-18 97.8 205 34.1
Cpa.g.sc58.79 Carica papaya HOM05D007411 ORTHO05D009025 1.0e-18 97.8 147 41.5
RcHm_v2.0_Chr4g0415591 Rosa chinensis HOM05D007411 ORTHO05D009025 1.0e-18 97.8 116 46.6
A05p15610 Brassica napus HOM05D007411 ORTHO05D009025 1.4e-18 97.4 185 35.1
BolC6t36888H Brassica oleracea HOM05D007411 ORTHO05D009025 1.4e-18 97.4 207 36.7
HanXRQChr05g0131941 Helianthus annuus HOM05D007411 ORTHO05D009025 1.4e-18 97.4 123 42.3
AT4G14805 Arabidopsis thaliana HOM05D007411 ORTHO05D009025 1.8e-18 97.1 156 39.1
CARHR221360 Cardamine hirsuta HOM05D007411 ORTHO05D009025 1.8e-18 97.1 155 39.4
MELO3C012663.2 Cucumis melo HOM05D007411 ORTHO05D009025 2.3e-18 96.7 114 43.0
Sp7g12940 Schrenkiella parvula HOM05D007411 ORTHO05D009025 3.0e-18 96.3 132 37.1
CsaV3_7G022390 Cucumis sativus L. HOM05D007411 ORTHO05D009025 5.1e-18 95.5 167 36.5
C06p16920 Brassica napus HOM05D007411 ORTHO05D009025 6.7e-18 95.1 125 40.8
BcaC02g11603 Brassica carinata HOM05D007411 ORTHO05D009025 8.8e-18 94.7 181 33.1
C04p13410 Brassica napus HOM05D007411 ORTHO05D009025 8.8e-18 94.7 181 33.1
BcaC08g44271 Brassica carinata HOM05D007411 ORTHO05D009025 1.1e-17 94.4 203 35.5
A08p11480 Brassica napus HOM05D007411 ORTHO05D009025 1.1e-17 94.4 152 39.5
BraA08t33142Z Brassica rapa HOM05D007411 ORTHO05D009025 1.1e-17 94.4 152 38.8
Aqoxy5G00439 Aquilegia oxysepala HOM05D007411 ORTHO05D009025 1.5e-17 94.0 158 40.5
BcaB04g18262 Brassica carinata HOM05D007411 ORTHO05D009025 2.0e-17 93.6 173 37.6
TAR633G2267 Trochodendron aralioides HOM05D007411 ORTHO05D009025 2.5e-17 93.2 111 44.1
Manes.03G176101 Manihot esculenta HOM05D007411 ORTHO05D009025 3.3e-17 92.8 164 37.8
BcaC07g37855 Brassica carinata HOM05D007411 ORTHO05D009025 4.3e-17 92.4 135 39.3
BolC8t48245H Brassica oleracea HOM05D007411 ORTHO05D009025 4.3e-17 92.4 135 39.3
BcaB02g07857 Brassica carinata HOM05D007411 ORTHO05D009025 7.4e-17 91.7 201 32.3
RcHm_v2.0_Chr4g0391821 Rosa chinensis HOM05D007411 ORTHO05D009025 9.7e-17 91.3 116 46.6
Glyma.01G235100 Glycine max HOM05D007411 ORTHO05D009025 2.2e-16 90.1 102 46.1
Potri.010G085000 Populus trichocarpa HOM05D007411 ORTHO05D009025 2.2e-16 90.1 163 36.8
Gohir.A09G217300 Gossypium hirsutum HOM05D007411 ORTHO05D009025 2.8e-16 89.7 207 36.7
Thhalv10027383m.g Eutrema salsugineum HOM05D007411 ORTHO05D009025 3.7e-16 89.4 217 33.2
Gohir.D09G219700 Gossypium hirsutum HOM05D007411 ORTHO05D009025 6.3e-16 88.6 165 38.8
LjContig00222g0000468 Lotus japonicus HOM05D007411 ORTHO05D009025 6.3e-16 88.6 120 42.5
Lalb_Chr05g0211151 Lupinus albus HOM05D007411 ORTHO05D009025 6.3e-16 88.6 98 46.9
CDE05G0749 Ceratophyllum demersum HOM05D007411 ORTHO05D009025 1.1e-15 87.8 157 36.3
Atru.chr4.2432 Acer truncatum HOM05D007411 ORTHO05D009025 1.4e-15 87.4 114 41.2
Eucgr.H03438 Eucalyptus grandis HOM05D007411 ORTHO05D009025 2.4e-15 86.7 96 49.0
Gorai.006G240700 Gossypium raimondii HOM05D007411 ORTHO05D009025 2.4e-15 86.7 202 36.1
Phvul.002G042700 Phaseolus vulgaris HOM05D007411 ORTHO05D009025 5.3e-15 85.5 118 45.8
PSO210G5563 Papaver somniferum HOM05D007411 ORTHO05D009025 6.9e-15 85.1 130 36.9
Medtr5g006900 Medicago truncatula HOM05D007411 ORTHO05D009025 1.2e-14 84.3 100 45.0
PSO832G1886 Papaver somniferum HOM05D007411 ORTHO05D009025 1.2e-14 84.3 148 35.8
Psat2g190000 Pisum sativum HOM05D007411 ORTHO05D009025 1.2e-14 84.3 136 39.0
Duzib151G0508 Durio zibethinus HOM05D007411 ORTHO05D009025 1.5e-14 84.0 112 40.2
LjContig00222g0003473 Lotus japonicus HOM05D007411 ORTHO05D009025 1.5e-14 84.0 121 46.3
MBI11_g32995_MAGBIO Magnolia biondii HOM05D007411 ORTHO05D009025 1.5e-14 84.0 145 39.3
VMungo1215G0970 Vigna mungo HOM05D007411 ORTHO05D009025 1.5e-14 84.0 101 48.5
CANSAT78G1457 Cannabis sativa HOM05D007411 ORTHO05D009025 5.9e-14 82.0 200 30.5
Psat7g023320 Pisum sativum HOM05D007411 ORTHO05D009025 5.9e-14 82.0 107 44.9
Medtr2g049980 Medicago truncatula HOM05D007411 ORTHO05D009025 7.7e-14 81.6 145 37.2
Sc13g0004560 Simmondsia chinensis HOM05D007411 ORTHO05D009025 7.7e-14 81.6 187 31.6
Thecc.04G235100 Theobroma cacao HOM05D007411 ORTHO05D009025 2.2e-13 80.1 96 44.8
TPR.G3913 Trifolium pratense HOM05D007411 ORTHO05D009025 6.5e-13 78.6 94 44.7
COL.COLO4_21515 Corchorus olitorius HOM05D007411 ORTHO05D009025 2.5e-12 76.6 141 36.9
Carub.0007s2732 Capsella rubella HOM05D007411 ORTHO05D009025 4.2e-12 75.9 170 33.5
Potri.008G155300 Populus trichocarpa HOM05D007411 ORTHO05D009025 8.8e-10 68.2 140 32.9
Peaxi162Scf00092g00337 Petunia axillaris HOM05D007411 ORTHO05D009025 1.8e-07 60.5 124 35.5
TAR633G0575 Trochodendron aralioides HOM05D007411 ORTHO05D009025 4.1e-07 59.3 84 35.7
TAR633G1834 Trochodendron aralioides HOM05D007411 ORTHO05D009025 5.3e-07 58.9 113 33.6
Oeu053321.1 Olea europaea HOM05D007411 ORTHO05D009025 1.2e-06 57.8 96 41.7
SEGI_16230 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 3.5e-06 56.2 104 34.6
SEGI_32233 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 5.9e-06 55.5 102 34.3
SEGI_37893 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 5.9e-06 55.5 103 35.0


User provided reference genes

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