Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold150G36658 Striga asiatica HOM05D000533 ORTHO05D010350 3.5e-92 341.7 177 100.0
Oeu058352.1 Olea europaea HOM05D000533 ORTHO05D010350 1.2e-28 130.6 83 79.5
Hund27629 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-28 130.2 184 45.7
Hund28852 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-28 130.2 184 45.7
Hund28975 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-28 130.2 184 45.7
Hund29088 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-28 130.2 184 45.7
Hund29500 Selenicereus undatus HOM05D001070 ORTHO05D005132 1.6e-28 130.2 184 45.7
Hund29432 Selenicereus undatus HOM05D001070 ORTHO05D005132 3.5e-28 129.0 189 46.0
HanXRQChr00c0336g0573701 Helianthus annuus HOM05D000533 ORTHO05D001069 2.1e-25 119.8 89 70.8
HanXRQChr02g0059741 Helianthus annuus HOM05D000533 ORTHO05D001069 2.1e-25 119.8 89 70.8
HanXRQChr15g0465421 Helianthus annuus HOM05D000533 ORTHO05D001069 2.1e-25 119.8 89 70.8
HanXRQChr17g0569711 Helianthus annuus HOM05D000533 ORTHO05D001069 2.1e-25 119.8 89 70.8
HanXRQChr17g0569761 Helianthus annuus HOM05D000533 ORTHO05D001069 2.1e-25 119.8 89 70.8
HanXRQCPg0580331 Helianthus annuus HOM05D000533 ORTHO05D001069 2.1e-25 119.8 89 70.8
Nitab4.5_0006409g0070 Nicotiana tabacum HOM05D001070 ORTHO05D010350 3.1e-24 115.9 156 46.8
PGR111G0065 Punica granatum HOM05D000533 ORTHO05D010350 5.3e-24 115.2 83 69.9
Nn1g08630 Nelumbo nucifera HOM05D000533 ORTHO05D010350 6.9e-24 114.8 90 67.8
Sed0000963 Sechium edule HOM05D000533 ORTHO05D010350 9.0e-24 114.4 82 69.5
BolC7t43859H Brassica oleracea HOM05D000533 ORTHO05D010350 1.2e-23 114.0 78 71.8
CARHR282480 Cardamine hirsuta HOM05D000533 ORTHO05D010350 2.0e-23 113.2 78 71.8
Gohir.A01G140394 Gossypium hirsutum HOM05D000533 ORTHO05D010350 2.0e-23 113.2 95 63.2
Gohir.D11G334200 Gossypium hirsutum HOM05D000533 ORTHO05D010350 2.0e-23 113.2 82 69.5
RcHm_v2.0_Chr3g0470821 Rosa chinensis HOM05D000533 ORTHO05D010350 2.6e-23 112.8 83 68.7
Eucgr.C01838 Eucalyptus grandis HOM05D000533 ORTHO05D010350 3.4e-23 112.5 82 70.7
Gohir.A04G053052 Gossypium hirsutum HOM05D000533 ORTHO05D010350 3.4e-23 112.5 85 67.1
ATCG01120 Arabidopsis thaliana HOM05D000533 ORTHO05D010350 4.5e-23 112.1 78 70.5
BolSC35t60687H Brassica oleracea HOM05D000533 ORTHO05D010350 1.0e-22 110.9 82 68.3
Medtr0002s0210 Medicago truncatula HOM05D000533 ORTHO05D010350 1.0e-22 110.9 88 64.8
Potri.012G027700 Populus trichocarpa HOM05D000533 ORTHO05D010350 1.0e-22 110.9 86 64.0
CAN.G1470.7 Capsicum annuum HOM05D000533 ORTHO05D010350 1.7e-22 110.2 82 68.3
CAN.G965.2 Capsicum annuum HOM05D000533 ORTHO05D010350 1.7e-22 110.2 82 68.3
DCAR_032543 Daucus carota HOM05D000533 ORTHO05D010350 2.9e-22 109.4 81 65.4
BolC2t10602H Brassica oleracea HOM05D000533 ORTHO05D010350 3.8e-22 109.0 78 69.2
BolSC29t60511H Brassica oleracea HOM05D000533 ORTHO05D010350 3.8e-22 109.0 78 69.2
BolSC35t60709H Brassica oleracea HOM05D000533 ORTHO05D010350 3.8e-22 109.0 78 69.2
BolSC37t60798H Brassica oleracea HOM05D000533 ORTHO05D010350 3.8e-22 109.0 78 69.2
BraSC138t45530Z Brassica rapa HOM05D000533 ORTHO05D010350 3.8e-22 109.0 78 69.2
BraSC143t45655Z Brassica rapa HOM05D000533 ORTHO05D010350 3.8e-22 109.0 78 69.2
BraSC25t45915Z Brassica rapa HOM05D000533 ORTHO05D010350 3.8e-22 109.0 78 69.2
BraSC59t46555Z Brassica rapa HOM05D000533 ORTHO05D010350 3.8e-22 109.0 78 69.2
Gohir.1Z050566 Gossypium hirsutum HOM05D000533 ORTHO05D010350 3.8e-22 109.0 76 72.4
LjContig00318g0021062 Lotus japonicus HOM05D000533 ORTHO05D010350 1.1e-21 107.5 82 65.9
LjContig00319g0004235 Lotus japonicus HOM05D000533 ORTHO05D010350 1.1e-21 107.5 82 65.9
Gohir.1Z049594 Gossypium hirsutum HOM05D000533 ORTHO05D010350 1.9e-21 106.7 79 68.4
Gohir.A13G086380 Gossypium hirsutum HOM05D000533 ORTHO05D010350 1.9e-21 106.7 76 71.1
PGSC0003DMG400029905 Solanum tuberosum HOM05D000533 ORTHO05D010350 2.5e-21 106.3 82 65.9
MD12G1237700 Malus domestica HOM05D000533 ORTHO05D010350 7.1e-21 104.8 83 63.9
Gohir.D06G106350 Gossypium hirsutum HOM05D000533 ORTHO05D010350 9.3e-21 104.4 87 62.1
Gorai.006G055100 Gossypium raimondii HOM05D000533 ORTHO05D010350 2.3e-19 99.8 82 63.4
Lalb_Chr07g0191831 Lupinus albus HOM05D000533 ORTHO05D010350 3.9e-19 99.0 81 64.2
MD09G1289300 Malus domestica HOM05D000533 ORTHO05D010350 5.1e-19 98.6 88 58.0
Gohir.D13G114450 Gossypium hirsutum HOM05D000533 ORTHO05D010350 8.7e-19 97.8 76 67.1
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 1.1e-18 97.4 113 54.0
Lalb_Chr15g0080711 Lupinus albus HOM05D000533 ORTHO05D010350 1.5e-18 97.1 81 63.0
Gohir.D11G237260 Gossypium hirsutum HOM05D000533 ORTHO05D010350 2.5e-18 96.3 77 63.6
Lalb_Chr20g0108591 Lupinus albus HOM05D000533 ORTHO05D010350 3.3e-18 95.9 81 63.0
Medtr4g006090 Medicago truncatula HOM05D000533 ORTHO05D010350 2.1e-17 93.2 81 61.7
Hund30643 Selenicereus undatus HOM05D001200 ORTHO05D009713 3.7e-17 92.4 66 66.7
HanXRQChr09g0258481 Helianthus annuus HOM05D000533 ORTHO05D001069 4.8e-17 92.0 70 68.6
Lsat_1_v5_gn_5_821 Lactuca sativa HOM05D000533 ORTHO05D001069 4.8e-17 92.0 61 73.8
Medtr7g021690 Medicago truncatula HOM05D001070 ORTHO05D005132 6.2e-17 91.7 76 61.8
Medtr6g042190 Medicago truncatula HOM05D000533 ORTHO05D010350 1.1e-16 90.9 81 60.5
Gorai.013G128500 Gossypium raimondii HOM05D000533 ORTHO05D010350 4.1e-16 89.0 73 61.6
Lalb_Chr03g0030911 Lupinus albus HOM05D000533 ORTHO05D010350 5.3e-16 88.6 74 63.5
BolSC49t61148H Brassica oleracea HOM05D000533 ORTHO05D010350 1.5e-15 87.0 64 65.6
MD08G1073600 Malus domestica HOM05D000533 ORTHO05D010350 2.0e-15 86.7 71 60.6
Peaxi162Scf00030g02115 Petunia axillaris HOM05D000533 ORTHO05D010350 3.4e-15 85.9 130 43.1
Hma1.2p1_0096F.1_g047620 Hydrangea macrophylla HOM05D001070 ORTHO05D005132 4.5e-15 85.5 122 45.1
BolC9t56911H Brassica oleracea HOM05D000533 ORTHO05D010350 5.8e-15 85.1 59 71.2
Gorai.011G221100 Gossypium raimondii HOM05D000533 ORTHO05D010350 1.7e-14 83.6 84 53.6
C09p40120 Brassica napus HOM05D000890 ORTHO05D000697 2.2e-14 83.2 58 70.7
BolSC29t60551H Brassica oleracea HOM05D000533 ORTHO05D010350 2.2e-14 83.2 64 67.2
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 7.2e-13 78.2 102 44.1
BolSC45t60904H Brassica oleracea HOM05D000533 ORTHO05D010350 9.3e-13 77.8 62 66.1
BolC5t34052H Brassica oleracea HOM05D000533 ORTHO05D010350 2.1e-12 76.6 55 69.1
HanXRQChr17g0560431 Helianthus annuus HOM05D000533 ORTHO05D010350 2.1e-12 76.6 65 63.1
Migut.D01247 Erythranthe guttata HOM05D001070 ORTHO05D005132 1.8e-11 73.6 69 60.9
Nn1g08629 Nelumbo nucifera HOM05D001070 ORTHO05D005132 2.3e-11 73.2 101 43.6
Peaxi162Scf00147g00312 Petunia axillaris HOM05D000445 ORTHO05D010350 3.9e-11 72.4 75 53.3
Medtr1g041540 Medicago truncatula HOM05D000533 ORTHO05D001069 8.7e-11 71.2 64 57.8
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 7.4e-10 68.2 98 43.9
AagrBONN_evm.TU.Sc2ySwM_368.3374 Anthoceros agrestis HOM05D003936 ORTHO05D004747 1.3e-09 67.4 76 48.7
Phvul.001G058350 Phaseolus vulgaris HOM05D000533 ORTHO05D010350 1.6e-09 67.0 49 65.3
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 2.2e-09 66.6 97 42.3
BolSC44t60827H Brassica oleracea HOM05D000533 ORTHO05D010350 2.8e-09 66.2 68 52.9
ClCG11G009240 Citrullus lanatus HOM05D001070 ORTHO05D005132 2.8e-09 66.2 102 43.1
Hund03919 Selenicereus undatus HOM05D000533 ORTHO05D010350 2.8e-09 66.2 73 50.7
MD12G1214000 Malus domestica HOM05D000533 ORTHO05D010350 4.8e-09 65.5 58 55.2
MELO3C027053.2 Cucumis melo HOM05D001070 ORTHO05D005132 8.2e-09 64.7 102 43.1
CBR_g28520 Chara braunii HOM05D003936 ORTHO05D004747 1.8e-08 63.5 67 47.8
Peaxi162Scf01305g00038 Petunia axillaris HOM05D001070 ORTHO05D005132 5.3e-08 62.0 122 39.3
HanXRQChr00c0690g0576771 Helianthus annuus HOM05D000533 ORTHO05D010350 9.0e-08 61.2 62 58.1
HanXRQChr17g0569771 Helianthus annuus HOM05D001070 ORTHO05D005132 1.5e-07 60.5 113 38.9
HanXRQChr00c0336g0573711 Helianthus annuus HOM05D001070 ORTHO05D005132 2.6e-07 59.7 122 36.1
HanXRQChr00c0703g0576911 Helianthus annuus HOM05D001070 ORTHO05D005132 2.6e-07 59.7 122 36.1
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 2.6e-07 59.7 122 36.1
HanXRQChr03g0087621 Helianthus annuus HOM05D001070 ORTHO05D005132 2.6e-07 59.7 122 36.1
HanXRQChr09g0258471 Helianthus annuus HOM05D001070 ORTHO05D005132 2.6e-07 59.7 122 36.1
HanXRQChr13g0413611 Helianthus annuus HOM05D001070 ORTHO05D005132 2.6e-07 59.7 122 36.1
HanXRQChr15g0465411 Helianthus annuus HOM05D001070 ORTHO05D005132 2.6e-07 59.7 122 36.1
HanXRQChr15g0465481 Helianthus annuus HOM05D001070 ORTHO05D005132 2.6e-07 59.7 122 36.1
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 2.6e-07 59.7 122 36.1
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 2.6e-07 59.7 122 36.1
SMO172G0122 Selaginella moellendorffii HOM05D003936 ORTHO05D004747 2.6e-07 59.7 69 46.4
Hund29253 Selenicereus undatus HOM05D001070 ORTHO05D005132 2.6e-07 59.7 143 34.3
Solyc00g500042.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 5.9e-07 58.5 122 39.3
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 5.9e-07 58.5 122 39.3
MCO09G555 Micromonas commoda HOM05D000533 ORTHO05D010350 7.7e-07 58.2 73 41.1
HanXRQChr15g0465471 Helianthus annuus HOM05D000533 ORTHO05D001069 3.8e-06 55.8 59 55.9
PSO063G4510 Papaver somniferum HOM05D001070 ORTHO05D005132 3.8e-06 55.8 100 38.0
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 3.8e-06 55.8 100 38.0
MD12G1021800 Malus domestica HOM05D000533 ORTHO05D010350 5.0e-06 55.5 45 60.0
Cre06.g264300 Chlamydomonas reinhardtii HOM05D003936 ORTHO05D004747 8.5e-06 54.7 75 37.3


User provided reference genes

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