Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold150G36624 Striga asiatica HOM05D005167 ORTHO05D006312 7.1e-209 730.3 363 100.0
Cpa.g.sc15.42 Carica papaya HOM05D005167 ORTHO05D006312 4.3e-73 279.3 341 44.6
CANSAT64G2797 Cannabis sativa HOM05D005167 ORTHO05D006312 1.7e-69 267.3 344 44.5
Sed0010261 Sechium edule HOM05D005167 ORTHO05D006312 2.2e-69 266.9 332 44.6
Thecc.07G187300 Theobroma cacao HOM05D005167 ORTHO05D006312 2.2e-69 266.9 373 41.3
FAN19G3173 Fragaria x ananassa HOM05D005167 ORTHO05D006312 2.1e-67 260.4 346 44.2
Gohir.D09G002700 Gossypium hirsutum HOM05D005167 ORTHO05D006312 1.0e-66 258.1 346 44.5
FAN26G1264 Fragaria x ananassa HOM05D005167 ORTHO05D006312 2.3e-66 256.9 344 44.2
Actinidia12290 Actinidia chinensis HOM05D005167 ORTHO05D006312 3.0e-66 256.5 385 39.7
Atru.chr9.69 Acer truncatum HOM05D005167 ORTHO05D006312 1.1e-65 254.6 329 42.6
ClCG08G000010 Citrullus lanatus HOM05D005167 ORTHO05D006312 5.7e-65 252.3 323 41.5
Nn3g20631 Nelumbo nucifera HOM05D005167 ORTHO05D006312 5.7e-65 252.3 339 42.5
ClCG04G000020 Citrullus lanatus HOM05D005167 ORTHO05D006312 6.3e-64 248.8 323 41.8
Oeu000168.1 Olea europaea HOM05D005167 ORTHO05D006312 8.2e-64 248.4 370 40.3
Lju225A7G63 Lonicera japonica HOM05D005167 ORTHO05D006312 1.5e-62 244.2 355 40.0
HanXRQChr15g0488451 Helianthus annuus HOM05D005167 ORTHO05D006312 5.9e-62 242.3 397 36.8
Migut.N00879 Erythranthe guttata HOM05D005167 ORTHO05D006312 1.0e-61 241.5 371 38.0
Lsat_1_v5_gn_8_167100 Lactuca sativa HOM05D005167 ORTHO05D006312 1.0e-61 241.5 336 41.7
RcHm_v2.0_Chr3g0496761 Rosa chinensis HOM05D005167 ORTHO05D006312 6.5e-61 238.8 379 40.6
Dinv01746 Davidia involucrata HOM05D005167 ORTHO05D006312 8.5e-61 238.4 409 35.2
HPP92_025056 Vanilla planifolia HOM05D005167 ORTHO05D006312 1.9e-60 237.3 424 34.4
Duzib116G0260 Durio zibethinus HOM05D005167 ORTHO05D006312 3.2e-60 236.5 342 41.5
Carub.0003s3540 Capsella rubella HOM05D005167 ORTHO05D006312 5.5e-60 235.7 331 39.6
Thhalv10028036m.g Eutrema salsugineum HOM05D005167 ORTHO05D006312 1.6e-59 234.2 332 40.4
CARHR046110 Cardamine hirsuta HOM05D005167 ORTHO05D006312 6.1e-59 232.3 334 39.8
SpUn0422_0010 Schrenkiella parvula HOM05D005167 ORTHO05D006312 6.1e-59 232.3 334 39.8
C07p02160 Brassica napus HOM05D005167 ORTHO05D006312 1.1e-57 228.0 333 38.4
BolC7t40625H Brassica oleracea HOM05D005167 ORTHO05D006312 1.1e-57 228.0 333 38.7
Sopen01g045080 Solanum pennellii HOM05D005167 ORTHO05D006312 1.1e-57 228.0 465 32.5
Solyc01g102670.3 Solanum lycopersicum HOM05D005167 ORTHO05D006312 1.5e-57 227.6 446 33.2
Thecc.06G025200 Theobroma cacao HOM05D005167 ORTHO05D006312 2.6e-57 226.9 418 36.8
A03p66890 Brassica napus HOM05D005167 ORTHO05D006312 3.3e-57 226.5 333 38.7
BraA01t02792Z Brassica rapa HOM05D005167 ORTHO05D006312 3.3e-57 226.5 333 38.7
MD00G1096100 Malus domestica HOM05D005167 ORTHO05D006312 3.3e-57 226.5 367 40.1
Hma1.2p1_0052F.1_g030120 Hydrangea macrophylla HOM05D005167 ORTHO05D006312 7.4e-57 225.3 475 32.0
PGSC0003DMG400018222 Solanum tuberosum HOM05D005167 ORTHO05D006312 9.7e-57 224.9 462 32.7
Aqoxy4G01544 Aquilegia oxysepala HOM05D005167 ORTHO05D006312 1.3e-56 224.6 364 38.5
CAN.G1379.23 Capsicum annuum HOM05D005167 ORTHO05D006312 1.7e-56 224.2 463 33.9
Sc07g0003350 Simmondsia chinensis HOM05D005167 ORTHO05D006312 1.7e-56 224.2 417 33.8
Sc07g0003360 Simmondsia chinensis HOM05D005167 ORTHO05D006312 1.7e-56 224.2 417 33.8
BcaB03g16877 Brassica carinata HOM05D005167 ORTHO05D006312 2.2e-56 223.8 336 38.7
QL02p104239 Quercus lobata HOM05D005167 ORTHO05D006312 3.7e-56 223.0 441 34.2
Atru.chr6.56 Acer truncatum HOM05D005167 ORTHO05D006312 6.3e-56 222.2 440 33.4
Phvul.006G133500 Phaseolus vulgaris HOM05D005167 ORTHO05D006312 1.4e-55 221.1 424 33.3
Gohir.D05G124100 Gossypium hirsutum HOM05D005167 ORTHO05D006312 1.8e-55 220.7 393 35.9
ATR0782G113 Amborella trichopoda HOM05D005167 ORTHO05D006312 2.4e-55 220.3 439 33.5
CiPaw.15G107300 Carya illinoinensis HOM05D005167 ORTHO05D006312 2.4e-55 220.3 369 37.1
Gorai.009G128100 Gossypium raimondii HOM05D005167 ORTHO05D006312 5.3e-55 219.2 400 36.0
HanXRQChr12g0386151 Helianthus annuus HOM05D005167 ORTHO05D006312 5.3e-55 219.2 336 37.5
SGA_v2.0_scaffold401G50971 Striga asiatica HOM05D005167 ORTHO05D006312 7.0e-55 218.8 416 33.2
Lj9C241G5 Lonicera japonica HOM05D005167 ORTHO05D006312 9.1e-55 218.4 455 33.6
Nn5g27095 Nelumbo nucifera HOM05D005167 ORTHO05D006312 2.0e-54 217.2 451 32.6
Nitab4.5_0004176g0010 Nicotiana tabacum HOM05D005167 ORTHO05D006312 7.7e-54 215.3 466 32.4
Os07g0657600 Oryza sativa ssp. japonica HOM05D005167 ORTHO05D006312 1.3e-53 214.5 439 32.3
SalBow3G4053 Salvia bowleyana HOM05D005167 ORTHO05D006312 1.7e-53 214.2 434 31.3
VMungo0540G0564 Vigna mungo HOM05D005167 ORTHO05D006312 1.7e-53 214.2 426 33.1
PSO170G3824 Papaver somniferum HOM05D005167 ORTHO05D006312 2.2e-53 213.8 409 34.2
EL10Ac6g13938 Beta vulgaris HOM05D005167 ORTHO05D006312 3.8e-53 213.0 438 32.2
arahy.Tifrunner.gnm1.ann1.T4BBUF Arachis hypogaea HOM05D005167 ORTHO05D006312 8.5e-53 211.8 424 32.1
Ciclev10001110m.g Citrus clementina HOM05D005167 ORTHO05D006312 1.4e-52 211.1 431 32.7
ECA248G1565 Erigeron canadensis HOM05D005167 ORTHO05D006312 1.4e-52 211.1 431 32.7
arahy.Tifrunner.gnm1.ann1.JG47X3 Arachis hypogaea HOM05D005167 ORTHO05D006312 1.9e-52 210.7 424 32.3
Ah.02g128610 Amaranthus hybridus HOM05D005167 ORTHO05D006312 3.2e-52 209.9 433 31.9
Nitab4.5_0001085g0040 Nicotiana tabacum HOM05D005167 ORTHO05D006312 3.2e-52 209.9 475 32.0
MELO3C034515.2 Cucumis melo HOM05D005167 ORTHO05D006312 4.2e-52 209.5 376 38.6
Glyma.09G018700 Glycine max HOM05D005167 ORTHO05D006312 7.2e-52 208.8 420 34.3
TAR629G0123 Trochodendron aralioides HOM05D005167 ORTHO05D006312 1.2e-51 208.0 303 40.3
Lj6g0014124 Lotus japonicus HOM05D005167 ORTHO05D006312 2.7e-51 206.8 453 30.9
Haze_09951 Corylus avellana HOM05D005167 ORTHO05D006312 6.1e-51 205.7 474 30.8
Peaxi162Scf00194g00934 Petunia axillaris HOM05D005167 ORTHO05D006312 2.3e-50 203.8 479 30.3
PGR042G3689 Punica granatum HOM05D005167 ORTHO05D006312 2.3e-50 203.8 464 30.6
DCAR_029460 Daucus carota HOM05D005167 ORTHO05D006312 3.0e-50 203.4 465 30.8
Glyma.13G026000 Glycine max HOM05D005167 ORTHO05D006312 8.8e-50 201.8 283 39.9
CiPaw.15G107200 Carya illinoinensis HOM05D005167 ORTHO05D006312 1.5e-49 201.1 323 37.8
Ciclev10030405m.g Citrus clementina HOM05D005167 ORTHO05D006312 2.6e-49 200.3 294 38.8
Gorai.006G003300 Gossypium raimondii HOM05D005167 ORTHO05D006312 3.3e-49 199.9 266 44.0
Cc02_g36800 Coffea canephora HOM05D005167 ORTHO05D006312 9.7e-49 198.4 415 33.5
Cc00_g01280 Coffea canephora HOM05D005167 ORTHO05D006312 1.7e-48 197.6 270 40.7
GSVIVG01029417001 Vitis vinifera HOM05D005167 ORTHO05D006312 2.8e-48 196.8 260 43.1
Dinv24548 Davidia involucrata HOM05D000457 ORTHO05D000560 4.8e-48 196.1 487 29.8
Duzib160G0520 Durio zibethinus HOM05D005167 ORTHO05D006312 4.8e-48 196.1 372 36.3
Gohir.A05G123200 Gossypium hirsutum HOM05D005167 ORTHO05D006312 4.8e-48 196.1 376 35.4
Hund15261 Selenicereus undatus HOM05D005167 ORTHO05D006312 4.8e-48 196.1 452 31.4
PGSC0003DMG400014526 Solanum tuberosum HOM05D005167 ORTHO05D006312 4.8e-48 196.1 322 36.3
Rhsim05G0120900 Rhododendron simsii HOM05D005167 ORTHO05D006312 1.8e-47 194.1 463 30.7
Prupe.4G287800 Prunus persica HOM05D005167 ORTHO05D006312 2.4e-47 193.7 285 40.7
CiPaw.09G096800 Carya illinoinensis HOM05D005167 ORTHO05D006312 1.6e-46 191.0 446 31.8
Sopen02g001190 Solanum pennellii HOM05D005167 ORTHO05D006312 2.0e-46 190.7 272 38.6
CAN.G989.3 Capsicum annuum HOM05D005167 ORTHO05D006312 5.9e-46 189.1 269 37.9
Phvul.L001673 Phaseolus vulgaris HOM05D005167 ORTHO05D006312 7.7e-46 188.7 277 41.2
Manes.18G143300 Manihot esculenta HOM05D005167 ORTHO05D006312 1.0e-45 188.3 296 38.9
Lju225C0G3 Lonicera japonica HOM05D005167 ORTHO05D006312 2.9e-45 186.8 333 33.6
ECA234G3362 Erigeron canadensis HOM05D005167 ORTHO05D006312 8.5e-45 185.3 284 37.7
CANSAT01G2096 Cannabis sativa HOM05D005167 ORTHO05D006312 1.5e-44 184.5 433 30.9
THA.LOC104809040 Tarenaya hassleriana HOM05D005167 ORTHO05D006312 2.5e-44 183.7 476 29.4
Gohir.A09G002900 Gossypium hirsutum HOM05D005167 ORTHO05D006312 7.2e-44 182.2 236 44.9
TWI31G1352 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 9.4e-44 181.8 259 37.8
Nitab4.5_0005690g0020 Nicotiana tabacum HOM05D005167 ORTHO05D006312 6.1e-43 179.1 271 37.3
TWI15G0790 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 8.0e-43 178.7 266 39.5
Potri.003G046300 Populus trichocarpa HOM05D005167 ORTHO05D006312 1.8e-42 177.6 441 30.2
vmacro19812 Vaccinium macrocarpon HOM05D005167 ORTHO05D006312 6.7e-42 175.6 448 29.2
BcaC08g44461 Brassica carinata HOM05D005167 ORTHO05D006312 9.7e-41 171.8 278 36.7
Manes.18G143000 Manihot esculenta HOM05D005167 ORTHO05D006312 8.3e-40 168.7 352 33.8
Manes.06G015900 Manihot esculenta HOM05D005167 ORTHO05D006312 1.1e-39 168.3 419 29.6
Eucgr.B01586 Eucalyptus grandis HOM05D005167 ORTHO05D006312 5.3e-39 166.0 282 36.9
TWI23G0323 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 2.2e-37 160.6 459 29.2
Nitab4.5_0001246g0010 Nicotiana tabacum HOM05D005167 ORTHO05D006312 9.4e-36 155.2 258 37.6
Nitab4.5_0007926g0020 Nicotiana tabacum HOM05D005167 ORTHO05D006312 1.6e-35 154.5 258 37.2
Eucgr.G00036 Eucalyptus grandis HOM05D005167 ORTHO05D006312 4.7e-35 152.9 389 28.5
Sabra03G0019800 Salix brachista HOM05D005167 ORTHO05D006312 8.0e-35 152.1 465 27.5
AUR62024866 Chenopodium quinoa HOM05D005167 ORTHO05D006312 4.0e-34 149.8 367 29.7
Gohir.D07G228750 Gossypium hirsutum HOM05D005167 ORTHO05D006312 2.6e-33 147.1 323 35.0
MBI17_g35115_MAGBIO Magnolia biondii HOM05D005167 ORTHO05D006312 3.4e-33 146.7 172 44.8
FvH4_1g27954 Fragaria vesca HOM05D005167 ORTHO05D006312 4.8e-32 142.9 156 47.4
BcaC06g36613 Brassica carinata HOM05D005167 ORTHO05D006312 1.8e-31 141.0 194 38.1
C06p19120 Brassica napus HOM05D005167 ORTHO05D006312 9.1e-31 138.7 218 39.9
BolC6t37111H Brassica oleracea HOM05D005167 ORTHO05D006312 9.1e-31 138.7 218 39.9
QL93p1868_0059 Quercus lobata HOM05D005167 ORTHO05D006312 3.5e-30 136.7 152 44.1
Gorai.001G263800 Gossypium raimondii HOM05D005167 ORTHO05D006312 1.0e-29 135.2 305 35.1
BcaC06g31947 Brassica carinata HOM05D005167 ORTHO05D006312 9.5e-28 128.6 191 35.1
Oeu000169.3 Olea europaea HOM05D005167 ORTHO05D006312 3.6e-27 126.7 168 42.9
Atru.chr6.45 Acer truncatum HOM05D005167 ORTHO05D006312 6.1e-27 125.9 400 27.8
HanXRQChr12g0378911 Helianthus annuus HOM05D005167 ORTHO05D006312 4.0e-26 123.2 137 44.5
QL93p0255_0001 Quercus lobata HOM05D005167 ORTHO05D006312 1.5e-25 121.3 312 31.4
QL01p052835 Quercus lobata HOM05D005167 ORTHO05D006312 5.7e-25 119.4 129 51.9
QL93p1868_0064 Quercus lobata HOM05D005167 ORTHO05D006312 1.7e-24 117.9 129 51.2
A07p01000 Brassica napus HOM05D005167 ORTHO05D006312 4.9e-24 116.3 143 46.9
CDE02G4394 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 5.4e-23 112.8 135 40.7
Thhalv10028065m.g Eutrema salsugineum HOM05D005167 ORTHO05D006312 2.0e-22 110.9 145 44.1
QL01p053234 Quercus lobata HOM05D005167 ORTHO05D006312 2.0e-22 110.9 152 39.5
CDE02G1408 Ceratophyllum demersum HOM05D005167 ORTHO05D006312 1.3e-21 108.2 129 47.3
Actinidia01647 Actinidia chinensis HOM05D005167 ORTHO05D006312 4.3e-20 103.2 115 43.5
MBI17_g35871_MAGBIO Magnolia biondii HOM05D005167 ORTHO05D006312 2.1e-19 100.9 105 48.6
COL.COLO4_11943 Corchorus olitorius HOM05D005167 ORTHO05D006312 8.0e-19 99.0 103 45.6
Eucgr.B01611 Eucalyptus grandis HOM05D005167 ORTHO05D006312 1.7e-16 91.3 98 43.9
SpUn0005_0090 Schrenkiella parvula HOM05D005167 ORTHO05D006312 1.7e-16 91.3 102 39.2
Atru.chr9.63 Acer truncatum HOM05D005167 ORTHO05D006312 3.7e-16 90.1 145 33.8
Aqoxy4G01501 Aquilegia oxysepala HOM05D005167 ORTHO05D006312 1.4e-15 88.2 206 30.6
QL07p001518 Quercus lobata HOM05D005167 ORTHO05D006312 2.7e-14 84.0 207 31.9
AUR62032503 Chenopodium quinoa HOM05D005167 ORTHO05D000001 3.9e-13 80.1 135 36.3
BcaC06g31946 Brassica carinata HOM05D005167 ORTHO05D006312 7.3e-12 75.9 223 24.2
PGSC0003DMG400040448 Solanum tuberosum HOM05D005167 ORTHO05D006312 2.3e-10 70.9 116 35.3
Gohir.A12G103850 Gossypium hirsutum HOM05D005167 ORTHO05D006312 1.4e-07 61.6 116 33.6


User provided reference genes

Program Settings