Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold14G07142 Striga asiatica HOM05D007310 ORTHO05D002375 5.0e-120 434.5 224 100.0
Migut.B00577 Erythranthe guttata HOM05D007310 ORTHO05D002375 1.2e-57 227.3 220 56.4
SalBow8G1210 Salvia bowleyana HOM05D007310 ORTHO05D002375 6.4e-51 204.9 213 54.9
Oeu022081.1 Olea europaea HOM05D007310 ORTHO05D002375 1.2e-33 147.5 210 44.8
Peaxi162Scf00299g00914 Petunia axillaris HOM05D007310 ORTHO05D002375 9.6e-31 137.9 205 41.5
Dinv24166 Davidia involucrata HOM05D007310 ORTHO05D002375 3.7e-30 136.0 219 38.8
Lalb_Chr09g0326871 Lupinus albus HOM05D007310 ORTHO05D002375 6.5e-27 125.2 219 35.6
Solyc01g105600.3 Solanum lycopersicum HOM05D007310 ORTHO05D002375 3.5e-25 119.4 209 40.7
Sopen01g048060 Solanum pennellii HOM05D007310 ORTHO05D002375 1.0e-24 117.9 209 40.2
Rhsim05G0103200 Rhododendron simsii HOM05D007310 ORTHO05D002375 1.8e-24 117.1 221 36.7
PGSC0003DMG400012536 Solanum tuberosum HOM05D007310 ORTHO05D002375 2.3e-24 116.7 210 39.0
Nitab4.5_0006625g0010 Nicotiana tabacum HOM05D007310 ORTHO05D002375 3.9e-24 115.9 216 36.6
Carub.0003s2834 Capsella rubella HOM05D007310 ORTHO05D002375 2.5e-23 113.2 181 39.2
CAN.G523.36 Capsicum annuum HOM05D007310 ORTHO05D002375 5.7e-23 112.1 208 38.5
Nitab4.5_0000863g0020 Nicotiana tabacum HOM05D007310 ORTHO05D002375 9.6e-23 111.3 224 34.4
Cc02_g21140 Coffea canephora HOM05D007310 ORTHO05D002375 3.7e-22 109.4 121 47.1
Hma1.2p1_0784F.1_g217300 Hydrangea macrophylla HOM05D007310 ORTHO05D002375 6.3e-22 108.6 120 47.5
HanXRQChr10g0290991 Helianthus annuus HOM05D007310 ORTHO05D002375 1.8e-21 107.1 207 37.2
AT2G14095 Arabidopsis thaliana HOM05D007310 ORTHO05D002375 6.9e-21 105.1 175 36.0
Potri.001G310100 Populus trichocarpa HOM05D007310 ORTHO05D002375 1.2e-20 104.4 213 32.4
Cfa005685 Carpinus fangiana HOM05D007310 ORTHO05D002375 7.6e-20 101.7 212 37.3
MD05G1054900 Malus domestica HOM05D007310 ORTHO05D002375 7.6e-20 101.7 208 35.6
Prupe.8G066300 Prunus persica HOM05D007310 ORTHO05D002375 7.6e-20 101.7 119 46.2
GSVIVG01015685001 Vitis vinifera HOM05D007310 ORTHO05D002375 7.6e-20 101.7 211 37.0
AL3G45790 Arabidopsis lyrata HOM05D007310 ORTHO05D002375 3.8e-19 99.4 124 41.9
FAN24G3359 Fragaria x ananassa HOM05D007310 ORTHO05D004145 5.0e-19 99.0 118 46.6
CARHR104210 Cardamine hirsuta HOM05D007310 ORTHO05D002375 1.1e-18 97.8 116 46.6
FvH4_2g13500 Fragaria vesca HOM05D007310 ORTHO05D002375 1.1e-18 97.8 118 45.8
Nn5g29980 Nelumbo nucifera HOM05D007310 ORTHO05D002375 1.1e-18 97.8 214 34.6
CSS0047922 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 1.9e-18 97.1 232 34.9
DCAR_021882 Daucus carota HOM05D007310 ORTHO05D002375 1.9e-18 97.1 122 43.4
ECA234G2182 Erigeron canadensis HOM05D007310 ORTHO05D002375 3.2e-18 96.3 116 46.6
Ciclev10030152m.g Citrus clementina HOM05D007310 ORTHO05D002375 2.7e-17 93.2 118 42.4
RcHm_v2.0_Chr7g0236611 Rosa chinensis HOM05D007310 ORTHO05D002375 2.7e-17 93.2 119 45.4
Eucgr.I02631 Eucalyptus grandis HOM05D007310 ORTHO05D002375 3.6e-17 92.8 117 44.4
FAN27G1440 Fragaria x ananassa HOM05D007310 ORTHO05D002375 1.0e-16 91.3 115 47.0
BcaB08g34551 Brassica carinata HOM05D007310 ORTHO05D002375 1.3e-16 90.9 125 42.4
Cpa.g.sc42.21 Carica papaya HOM05D007310 ORTHO05D002375 5.1e-16 89.0 121 40.5
AUR62011722 Chenopodium quinoa HOM05D007310 ORTHO05D002375 6.7e-16 88.6 117 45.3
Haze_10565 Corylus avellana HOM05D007310 ORTHO05D002375 6.7e-16 88.6 118 46.6
Duzib248G0762 Durio zibethinus HOM05D007310 ORTHO05D002375 1.1e-15 87.8 119 42.0
Manes.07G035800 Manihot esculenta HOM05D007310 ORTHO05D002375 1.5e-15 87.4 116 40.5
Ca_18369_v3 Cicer arietinum L. HOM05D007310 ORTHO05D002375 1.9e-15 87.0 123 41.5
Glyma.13G042400 Glycine max HOM05D007310 ORTHO05D002375 3.3e-15 86.3 119 39.5
AUR62012905 Chenopodium quinoa HOM05D007310 ORTHO05D002375 4.3e-15 85.9 117 43.6
CiPaw.05G032100 Carya illinoinensis HOM05D007310 ORTHO05D002375 5.7e-15 85.5 118 43.2
PSO761G0222 Papaver somniferum HOM05D007310 ORTHO05D002375 1.3e-14 84.3 114 41.2
Sabra16G0196000 Salix brachista HOM05D007310 ORTHO05D002375 1.6e-14 84.0 220 31.4
Thecc.02G133200 Theobroma cacao HOM05D007310 ORTHO05D002375 2.2e-14 83.6 118 41.5
VMungo0251G1327 Vigna mungo HOM05D007310 ORTHO05D002375 2.2e-14 83.6 119 37.8
EL10Ac9g21224 Beta vulgaris HOM05D007310 ORTHO05D002375 3.7e-14 82.8 124 39.5
COL.COLO4_32323 Corchorus olitorius HOM05D007310 ORTHO05D002375 6.3e-14 82.0 210 30.5
Potri.017G050000 Populus trichocarpa HOM05D007310 ORTHO05D002375 8.2e-14 81.6 189 31.7
Actinidia28038 Actinidia chinensis HOM05D007310 ORTHO05D002375 1.4e-13 80.9 191 35.6
Manes.07G038100 Manihot esculenta HOM05D007310 ORTHO05D002375 1.8e-13 80.5 116 37.9
CANSAT11G0123 Cannabis sativa HOM05D007310 ORTHO05D002375 3.1e-13 79.7 221 30.8
Thhalv10022863m.g Eutrema salsugineum HOM05D007310 ORTHO05D002375 4.1e-13 79.3 96 45.8
Sp3g27450 Schrenkiella parvula HOM05D007310 ORTHO05D002375 6.9e-13 78.6 116 39.7
TPR.G2868 Trifolium pratense HOM05D007310 ORTHO05D002375 1.2e-12 77.8 123 35.8
Aa31LG8G12500 Aethionema arabicum HOM05D007310 ORTHO05D002375 1.5e-12 77.4 116 39.7
Psat7g100440 Pisum sativum HOM05D007310 ORTHO05D002375 1.5e-12 77.4 119 32.8
PGR142G1548 Punica granatum HOM05D007310 ORTHO05D002375 3.4e-12 76.3 230 29.6
MBI06_g03314_MAGBIO Magnolia biondii HOM05D007310 ORTHO05D002375 4.5e-12 75.9 122 40.2
Medtr4g093820 Medicago truncatula HOM05D007310 ORTHO05D002375 5.9e-12 75.5 119 34.5
BcaC01g03103 Brassica carinata HOM05D007310 ORTHO05D002375 7.7e-12 75.1 124 36.3
arahy.Tifrunner.gnm1.ann1.U7VQVC Arachis hypogaea HOM05D007310 ORTHO05D002375 1.3e-11 74.3 124 33.9
FAN15G0442 Fragaria x ananassa HOM05D007310 ORTHO05D002375 1.7e-11 73.9 118 39.0
CiPaw.06G156100 Carya illinoinensis HOM05D007310 ORTHO05D002375 2.2e-11 73.6 119 39.5
arahy.Tifrunner.gnm1.ann1.KVX74B Arachis hypogaea HOM05D007310 ORTHO05D002375 2.9e-11 73.2 119 34.5
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 3.8e-11 72.8 144 31.9
THA.LOC104804411 Tarenaya hassleriana HOM05D007310 ORTHO05D002375 8.5e-11 71.6 116 37.1
Migut.L00163 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.1e-10 71.2 104 39.4
Lj4g0014623 Lotus japonicus HOM05D007310 ORTHO05D002375 1.1e-10 71.2 136 34.6
TAR625G1009 Trochodendron aralioides HOM05D007310 ORTHO05D002375 1.4e-10 70.9 128 36.7
BraA03t13650Z Brassica rapa HOM05D007310 ORTHO05D002375 1.9e-10 70.5 124 33.9
C03p56020 Brassica napus HOM05D007310 ORTHO05D002375 4.2e-10 69.3 125 34.4
BolC3t17888H Brassica oleracea HOM05D007310 ORTHO05D002375 4.2e-10 69.3 125 34.4
Sabra17G0036600 Salix brachista HOM05D007310 ORTHO05D002375 4.2e-10 69.3 123 40.7
Sabra17G0042000 Salix brachista HOM05D007310 ORTHO05D002375 4.2e-10 69.3 123 39.8
Phvul.002G211100 Phaseolus vulgaris HOM05D007310 ORTHO05D002375 9.4e-10 68.2 119 32.8
QL11p023211 Quercus lobata HOM05D007310 ORTHO05D002375 7.9e-09 65.1 216 28.2
TWI14G0938 Tripterygium wilfordii HOM05D007310 ORTHO05D002375 7.9e-09 65.1 118 31.4
A03p45150 Brassica napus HOM05D007310 ORTHO05D002375 1.4e-08 64.3 124 32.3
Duzib132G0922 Durio zibethinus HOM05D007310 ORTHO05D002375 1.4e-08 64.3 78 51.3
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 1.8e-08 63.9 117 32.5
CSS0048944 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 3.0e-08 63.2 66 47.0
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 3.0e-08 63.2 122 32.0
MSTRG.3754 Avicennia marina HOM05D004728 ORTHO05D002375 3.9e-08 62.8 118 38.1
Glyma.08G070200 Glycine max HOM05D007310 ORTHO05D002375 3.9e-08 62.8 137 33.6
PSO700G0139 Papaver somniferum HOM05D007310 ORTHO05D002375 3.9e-08 62.8 114 33.3
PSO761G0559 Papaver somniferum HOM05D015253 ORTHO05D002375 3.9e-08 62.8 107 35.5
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 6.7e-08 62.0 127 33.1
ECA247G1585 Erigeron canadensis HOM05D004728 ORTHO05D002375 6.7e-08 62.0 104 34.6
TAR376G0136 Trochodendron aralioides HOM05D007310 ORTHO05D002375 6.7e-08 62.0 122 38.5
Sc08g0003780 Simmondsia chinensis HOM05D007310 ORTHO05D002375 1.1e-07 61.2 117 35.9
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 1.5e-07 60.8 115 31.3
RcHm_v2.0_Chr2g0112261 Rosa chinensis HOM05D004728 ORTHO05D002375 1.5e-07 60.8 103 35.9
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 2.0e-07 60.5 117 31.6
HPP92_019302 Vanilla planifolia HOM05D007310 ORTHO05D002375 2.6e-07 60.1 117 29.9
ClCG09G015950 Citrullus lanatus HOM05D007310 ORTHO05D002375 4.4e-07 59.3 98 39.8
Zm00001eb027840 Zea mays HOM05D007310 ORTHO05D002375 4.4e-07 59.3 92 38.0
MD08G1189800 Malus domestica HOM05D004728 ORTHO05D002375 7.4e-07 58.5 122 28.7
Sed0021578 Sechium edule HOM05D007310 ORTHO05D002375 7.4e-07 58.5 103 36.9
CSS0024408 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 1.3e-06 57.8 70 47.1
MELO3C018616.2 Cucumis melo HOM05D007310 ORTHO05D002375 1.3e-06 57.8 103 35.9
DCAR_003461 Daucus carota HOM05D004728 ORTHO05D002375 1.3e-06 57.8 125 29.6
unitig_0.g2111 Utricularia gibba HOM05D004728 ORTHO05D002375 1.3e-06 57.8 128 28.9
Migut.C01097 Erythranthe guttata HOM05D004728 ORTHO05D002375 2.2e-06 57.0 145 27.6
FvH4_1g20190 Fragaria vesca HOM05D004728 ORTHO05D002375 2.2e-06 57.0 103 34.0
FAN19G1373 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.2e-06 57.0 103 34.0
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.2e-06 57.0 103 34.0
Gohir.D02G199400 Gossypium hirsutum HOM05D007310 ORTHO05D002375 2.2e-06 57.0 103 36.9
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 4.8e-06 55.8 109 30.3
Lsat_1_v5_gn_5_108861 Lactuca sativa HOM05D007310 ORTHO05D002375 4.8e-06 55.8 62 45.2
Os10g0377000 Oryza sativa ssp. japonica HOM05D007310 ORTHO05D002375 6.3e-06 55.5 115 34.8


User provided reference genes

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