Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 0.0e+00 2287.7 1142 100.0
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 0.0e+00 1874.8 1129 83.1
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 0.0e+00 1872.8 1128 83.2
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 0.0e+00 1859.7 1129 82.6
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 0.0e+00 1821.2 1130 80.4
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 0.0e+00 1820.4 1131 80.5
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 0.0e+00 1819.7 1130 80.3
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 1815.8 1130 80.4
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 0.0e+00 1813.5 1130 80.2
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 0.0e+00 1810.4 1130 80.6
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 0.0e+00 1809.7 1130 80.2
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 0.0e+00 1805.4 1128 79.7
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 0.0e+00 1805.0 1129 79.8
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 0.0e+00 1804.3 1126 80.6
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 1801.2 1130 79.5
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 0.0e+00 1799.3 1130 79.3
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 0.0e+00 1798.9 1130 79.9
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 0.0e+00 1798.5 1130 79.8
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 0.0e+00 1798.5 1130 79.5
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 0.0e+00 1798.5 1130 79.9
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 0.0e+00 1798.1 1130 79.4
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 1797.7 1130 79.6
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 0.0e+00 1797.7 1126 80.1
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1797.3 1130 78.9
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 0.0e+00 1797.3 1130 79.7
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 1796.9 1130 79.4
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 0.0e+00 1796.6 1130 79.6
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 0.0e+00 1796.2 1130 79.3
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1795.4 1130 79.8
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 1793.9 1130 79.6
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 0.0e+00 1793.9 1130 79.5
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 1793.9 1130 79.3
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 1793.5 1130 79.5
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 1793.5 1130 79.0
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 0.0e+00 1793.5 1130 79.5
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 0.0e+00 1792.7 1130 79.5
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 0.0e+00 1792.7 1130 79.0
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 0.0e+00 1791.2 1130 79.6
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 0.0e+00 1790.8 1130 79.6
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 1790.4 1130 79.4
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 1790.4 1130 79.1
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 0.0e+00 1790.0 1130 78.7
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 0.0e+00 1789.6 1131 79.5
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 0.0e+00 1788.9 1130 79.3
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 1788.9 1130 79.4
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1787.7 1130 79.1
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 0.0e+00 1787.3 1131 78.9
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 1785.8 1130 78.8
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 0.0e+00 1785.8 1130 79.3
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 0.0e+00 1785.4 1130 79.2
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 0.0e+00 1785.4 1130 78.8
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 1784.2 1130 78.6
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 1783.8 1130 79.2
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 1783.8 1130 79.2
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 0.0e+00 1783.8 1130 79.0
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 0.0e+00 1783.5 1128 79.0
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 1781.5 1130 78.9
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 0.0e+00 1781.1 1131 78.7
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 0.0e+00 1780.0 1128 78.5
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 1779.6 1130 78.8
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 0.0e+00 1778.8 1130 79.0
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 0.0e+00 1777.3 1130 78.8
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 0.0e+00 1776.5 1128 78.5
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 0.0e+00 1776.1 1130 79.1
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 0.0e+00 1773.1 1130 78.1
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 0.0e+00 1772.3 1129 78.2
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 1770.7 1130 78.0
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 0.0e+00 1770.0 1130 78.5
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 0.0e+00 1769.6 1136 77.7
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 0.0e+00 1769.6 1128 78.6
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1769.2 1131 78.2
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 1769.2 1130 79.0
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1766.5 1131 77.9
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 0.0e+00 1765.7 1122 78.9
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1765.4 1131 77.8
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 0.0e+00 1764.6 1128 77.4
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 0.0e+00 1764.2 1129 78.7
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 1763.4 1128 78.4
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 0.0e+00 1762.7 1128 77.7
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 0.0e+00 1760.0 1128 78.2
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 0.0e+00 1758.8 1128 77.8
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 1757.7 1130 78.5
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 1757.7 1122 78.3
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 1755.7 1096 80.5
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 0.0e+00 1755.0 1130 77.7
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 1753.8 1122 78.2
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 0.0e+00 1749.9 1128 77.0
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 0.0e+00 1748.0 1130 78.1
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 0.0e+00 1724.9 1097 78.0
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 1718.4 1132 76.8
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 1714.5 1127 75.8
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 0.0e+00 1711.8 1129 76.1
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 0.0e+00 1706.8 1129 75.9
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 1704.9 1076 78.4
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 1683.7 1129 75.1
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 0.0e+00 1648.3 1130 74.2
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 0.0e+00 1647.5 1130 73.6
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 0.0e+00 1622.1 1126 70.7
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 0.0e+00 1584.3 1142 69.6
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 0.0e+00 1582.8 1130 70.8
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 0.0e+00 1563.9 1125 70.3
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1546.2 1126 69.4
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1494.2 1052 71.9
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 1471.8 929 79.5
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1447.2 1070 69.1
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 1402.5 1130 66.2
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 0.0e+00 1335.5 1172 60.8
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 1250.7 821 74.9
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 0.0e+00 1243.8 906 69.3
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 1154.4 1155 54.3
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 0.0e+00 1143.3 1237 52.3
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 1.1e-308 1063.5 673 79.6
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 5.5e-308 1061.2 820 67.0
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 8.6e-301 1037.3 895 62.6
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 1.0e-290 1003.8 1128 52.8
TAR636G0878 Trochodendron aralioides HOM05D001937 ORTHO05D007024 3.9e-269 932.2 616 76.3
TAR636G1691 Trochodendron aralioides HOM05D001937 ORTHO05D007024 3.8e-248 862.4 505 82.8
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 2.5e-220 770.0 656 60.1
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 1.2e-217 761.1 1103 40.2
TAR636G2433 Trochodendron aralioides HOM05D001937 ORTHO05D007024 5.9e-185 652.5 456 73.7
TAR636G1243 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.7e-176 624.4 392 79.8
Dinv10935 Davidia involucrata HOM05D001937 ORTHO05D007024 4.4e-164 583.2 424 72.6
MD02G1239500 Malus domestica HOM05D001937 ORTHO05D007024 6.0e-129 466.5 374 66.8
Lalb_Chr16g0382841 Lupinus albus HOM05D001937 ORTHO05D007024 4.2e-106 390.6 269 73.6
CBR_g26059 Chara braunii HOM05D001937 ORTHO05D007024 7.9e-97 359.8 311 62.4
Oeu061583.3 Olea europaea HOM05D001937 ORTHO05D007024 4.0e-80 304.3 481 42.0
SalBow2G0807 Salvia bowleyana HOM05D001937 ORTHO05D007024 4.2e-74 284.3 173 83.2
SalBow1G2752 Salvia bowleyana HOM05D001937 ORTHO05D007024 1.4e-72 279.3 173 82.7
SalBow1G1280 Salvia bowleyana HOM05D001937 ORTHO05D007024 1.2e-71 276.2 173 81.5
HPP92_019823 Vanilla planifolia HOM05D001937 ORTHO05D007024 7.8e-60 236.9 140 84.3
ECA234G0635 Erigeron canadensis HOM05D001937 ORTHO05D007024 1.5e-58 232.6 232 55.2
Potri.017G124400 Populus trichocarpa HOM05D001937 ORTHO05D007024 3.5e-44 184.9 165 63.6
TAR636G2347 Trochodendron aralioides HOM05D001937 ORTHO05D007024 2.0e-39 169.1 91 85.7
HPP92_019822 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.4e-37 162.9 152 61.8
ECA234G4540 Erigeron canadensis HOM05D016619 ORTHO05D007024 4.1e-37 161.4 181 53.0
HPP92_019824 Vanilla planifolia HOM05D001937 ORTHO05D007024 2.8e-25 122.1 104 59.6


User provided reference genes

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