Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 6.8e-123 444.1 244 100.0
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 5.7e-61 238.4 155 85.8
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 5.3e-59 231.9 162 80.9
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 7.0e-59 231.5 156 82.7
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 1.0e-57 227.6 159 79.9
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 2.2e-57 226.5 156 80.1
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 6.5e-57 224.9 155 80.6
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 1.5e-56 223.8 151 81.5
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 1.5e-56 223.8 151 81.5
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 9.4e-56 221.1 154 81.2
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 3.6e-55 219.2 160 76.9
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 6.1e-55 218.4 158 77.2
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 1.4e-54 217.2 150 81.3
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 3.0e-54 216.1 144 83.3
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 4.0e-54 215.7 161 77.0
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 4.0e-54 215.7 153 79.1
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 5.2e-54 215.3 153 79.1
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 5.2e-54 215.3 151 78.8
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 1.2e-53 214.2 152 77.0
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 2.0e-53 213.4 153 78.4
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 2.6e-53 213.0 151 77.5
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 2.6e-53 213.0 146 81.5
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 3.3e-53 212.6 151 77.5
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 5.7e-53 211.8 153 77.1
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 7.5e-53 211.5 152 75.7
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 7.5e-53 211.5 150 76.0
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 9.7e-53 211.1 155 77.4
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 1.3e-52 210.7 155 75.5
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 1.7e-52 210.3 151 76.2
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 2.8e-52 209.5 150 75.3
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 2.8e-52 209.5 150 75.3
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 3.7e-52 209.1 148 77.7
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 6.3e-52 208.4 148 75.0
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 1.1e-51 207.6 146 75.3
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 1.4e-51 207.2 148 75.0
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 1.4e-51 207.2 151 76.2
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 1.8e-51 206.8 149 76.5
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.8e-51 206.8 149 76.5
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 1.8e-51 206.8 154 74.7
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 3.1e-51 206.1 149 75.8
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 3.1e-51 206.1 156 75.6
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 4.1e-51 205.7 149 75.8
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 5.3e-51 205.3 150 74.7
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 7.0e-51 204.9 145 77.2
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.2e-50 204.1 149 75.2
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.2e-50 204.1 149 75.2
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 1.6e-50 203.8 146 78.1
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 2.0e-50 203.4 174 70.1
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 2.7e-50 203.0 149 75.2
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 5.9e-50 201.8 150 71.3
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 5.9e-50 201.8 145 74.5
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 7.7e-50 201.4 149 73.8
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 7.7e-50 201.4 146 75.3
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 1.0e-49 201.1 148 72.3
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 1.7e-49 200.3 149 71.8
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 2.2e-49 199.9 150 72.7
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 2.9e-49 199.5 149 73.2
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 3.8e-49 199.1 142 75.4
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 3.8e-49 199.1 142 74.6
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 3.8e-49 199.1 154 70.1
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 3.8e-49 199.1 142 75.4
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 3.8e-49 199.1 142 75.4
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 5.0e-49 198.7 146 73.3
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 5.0e-49 198.7 152 74.3
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 1.1e-48 197.6 142 74.6
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 1.1e-48 197.6 142 73.9
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 1.1e-48 197.6 142 73.9
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 1.1e-48 197.6 142 74.6
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 1.1e-48 197.6 142 74.6
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 1.9e-48 196.8 146 74.0
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 1.9e-48 196.8 146 74.0
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 2.5e-48 196.4 142 73.9
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 2.5e-48 196.4 142 73.9
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 3.2e-48 196.1 142 73.9
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 3.2e-48 196.1 142 73.9
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 3.2e-48 196.1 142 73.9
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 7.2e-48 194.9 155 68.4
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 7.2e-48 194.9 149 69.8
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 9.4e-48 194.5 131 83.2
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 1.6e-47 193.7 142 73.9
Cc02_g21600 Coffea canephora HOM05D006161 ORTHO05D007483 6.1e-47 191.8 154 74.0
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 2.3e-46 189.9 153 68.6
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 4.0e-46 189.1 142 71.8
Cfa005604 Carpinus fangiana HOM05D006161 ORTHO05D007483 1.2e-45 187.6 152 70.4
SGA_v2.0_scaffold11G05811 Striga asiatica HOM05D006161 ORTHO05D007483 2.6e-45 186.4 114 91.2
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 5.7e-45 185.3 140 70.0
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 7.5e-45 184.9 139 74.1
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 1.7e-44 183.7 138 71.7
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 2.2e-44 183.3 146 68.5
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 7.0e-43 178.3 152 65.1
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 2.7e-42 176.4 145 65.5
unitig_8.g3487 Utricularia gibba HOM05D006161 ORTHO05D007483 3.5e-42 176.0 233 51.1
CiPaw.05G036100 Carya illinoinensis HOM05D006161 ORTHO05D007483 2.3e-41 173.3 151 66.2
ClCG09G015360 Citrullus lanatus HOM05D006161 ORTHO05D007483 1.1e-40 171.0 158 63.3
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 3.0e-38 162.9 154 60.4
Nn4g23459 Nelumbo nucifera HOM05D006161 ORTHO05D007483 3.0e-38 162.9 149 64.4
Cpa.g.sc42.64 Carica papaya HOM05D006161 ORTHO05D007483 5.2e-38 162.2 151 64.9
Lj6g0024224 Lotus japonicus HOM05D006161 ORTHO05D007483 3.4e-37 159.5 152 61.2
Actinidia00265 Actinidia chinensis HOM05D006161 ORTHO05D007483 5.7e-37 158.7 152 63.2
QL11p020678 Quercus lobata HOM05D006161 ORTHO05D007483 3.1e-35 152.9 112 75.0
Ca_18349_v3 Cicer arietinum L. HOM05D006161 ORTHO05D007483 5.4e-35 152.1 150 58.0
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 5.4e-35 152.1 173 52.0
Haze_10694 Corylus avellana HOM05D006161 ORTHO05D007483 2.0e-34 150.2 111 74.8
Sabra05G0140100 Salix brachista HOM05D006161 ORTHO05D007483 5.9e-34 148.7 103 78.6
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 3.8e-33 146.0 144 58.3
Gohir.A12G014900 Gossypium hirsutum HOM05D006161 ORTHO05D007483 3.8e-33 146.0 156 57.7
DCAR_001788 Daucus carota HOM05D006161 ORTHO05D007483 2.5e-32 143.3 112 70.5
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 1.6e-31 140.6 136 53.7
Hma1.2p1_0704F.1_g206700 Hydrangea macrophylla HOM05D006161 ORTHO05D007483 6.1e-31 138.7 110 70.9
Zm00001eb409430 Zea mays HOM05D006161 ORTHO05D007483 2.3e-30 136.7 119 63.9
Potri.015G005600 Populus trichocarpa HOM05D006161 ORTHO05D007483 1.2e-29 134.4 160 55.0
TWI14G1282 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 1.5e-29 134.0 176 51.1
HPP92_024935 Vanilla planifolia HOM05D006161 ORTHO05D007483 1.5e-29 134.0 111 69.4
Zm00001eb138120 Zea mays HOM05D006161 ORTHO05D007483 4.4e-29 132.5 105 68.6
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 2.9e-28 129.8 136 48.5
Duzib132G0386 Durio zibethinus HOM05D006161 ORTHO05D007483 6.4e-28 128.6 172 50.0
CDE07G1624 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 3.5e-26 122.9 92 73.9
Gohir.D12G015300 Gossypium hirsutum HOM05D006161 ORTHO05D007483 8.6e-25 118.2 156 50.0
Gorai.008G015400 Gossypium raimondii HOM05D006161 ORTHO05D007483 8.6e-25 118.2 156 50.0
Thecc.02G139200 Theobroma cacao HOM05D006161 ORTHO05D007483 3.3e-24 116.3 154 51.3
arahy.Tifrunner.gnm1.ann1.A44469 Arachis hypogaea HOM05D006161 ORTHO05D007483 6.8e-22 108.6 81 75.3
COL.COLO4_13985 Corchorus olitorius HOM05D006161 ORTHO05D007483 2.9e-20 103.2 126 52.4
arahy.Tifrunner.gnm1.ann1.HFW61Q Arachis hypogaea HOM05D006161 ORTHO05D007483 1.1e-14 84.7 66 68.2
Pp3c24_330 Physcomitrium patens HOM05D006161 ORTHO05D007483 8.3e-12 75.1 136 38.2
Actinidia23993 Actinidia chinensis HOM05D006161 ORTHO05D007483 3.5e-10 69.7 128 40.6
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 1.0e-09 68.2 44 77.3
VMungo0540G0821 Vigna mungo HOM05D006161 ORTHO05D007483 1.1e-08 64.7 42 76.2
TPR.G10469 Trifolium pratense HOM05D006161 ORTHO05D007483 2.5e-08 63.5 51 52.9
CBR_g70737 Chara braunii HOM05D006161 ORTHO05D007483 2.1e-07 60.5 136 30.1


User provided reference genes

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