Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold14G07091 Striga asiatica HOM05D000535 ORTHO05D000427 5.1e-113 411.0 195 100.0
SGA_v2.0_scaffold14G07097 Striga asiatica HOM05D000535 ORTHO05D000427 5.1e-28 128.6 189 43.4
SGA_v2.0_scaffold14G07094 Striga asiatica HOM05D000535 ORTHO05D000427 9.6e-27 124.4 189 41.3
COL.COLO4_16143 Corchorus olitorius HOM05D000535 ORTHO05D000427 2.4e-14 83.2 173 35.8
SGA_v2.0_scaffold238G43897 Striga asiatica HOM05D000535 ORTHO05D000427 5.5e-14 82.0 169 38.5
Potri.004G067800 Populus trichocarpa HOM05D000535 ORTHO05D000427 2.1e-13 80.1 181 34.3
Sc14g0008200 Simmondsia chinensis HOM05D000535 ORTHO05D000427 2.1e-13 80.1 164 37.2
Sc14g0008190 Simmondsia chinensis HOM05D000535 ORTHO05D000427 2.7e-13 79.7 172 36.6
Cc02_g29530 Coffea canephora HOM05D000535 ORTHO05D000427 3.5e-13 79.3 190 34.2
COL.COLO4_16157 Corchorus olitorius HOM05D000535 ORTHO05D000427 4.6e-13 79.0 167 34.1
vmacro18605 Vaccinium macrocarpon HOM05D000535 ORTHO05D000427 6.0e-13 78.6 161 34.8
CAN.G128.72 Capsicum annuum HOM05D000535 ORTHO05D000427 5.1e-12 75.5 183 31.1
Hma1.2p1_0807F.1_g221410 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 5.1e-12 75.5 182 32.4
MSTRG.11534 Avicennia marina HOM05D000535 ORTHO05D000427 6.7e-12 75.1 172 36.6
Hma1.2p1_0989F.1_g244860 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 1.1e-11 74.3 182 31.3
SalBow5G3406 Salvia bowleyana HOM05D000535 ORTHO05D000427 1.1e-11 74.3 165 33.3
Solyc06g072230.1 Solanum lycopersicum HOM05D000535 ORTHO05D000427 1.1e-11 74.3 177 31.1
Cc00_g21930 Coffea canephora HOM05D000535 ORTHO05D000427 2.5e-11 73.2 175 34.9
Sabra17G0125900 Salix brachista HOM05D000535 ORTHO05D000427 2.5e-11 73.2 161 31.1
Cc04_g08330 Coffea canephora HOM05D000535 ORTHO05D000427 3.3e-11 72.8 169 33.7
SGA_v2.0_scaffold238G43892 Striga asiatica HOM05D000535 ORTHO05D000427 4.3e-11 72.4 162 35.8
Ciclev10022211m.g Citrus clementina HOM05D000535 ORTHO05D000427 5.6e-11 72.0 207 30.9
Oeu020486.1 Olea europaea HOM05D000535 ORTHO05D000427 5.6e-11 72.0 158 31.0
Potri.017G153200 Populus trichocarpa HOM05D000535 ORTHO05D000427 7.4e-11 71.6 182 29.7
CSS0021540 Camellia sinensis var. sinensis HOM05D000535 ORTHO05D000427 9.6e-11 71.2 187 33.2
Lj9P411T41 Lonicera japonica HOM05D000535 ORTHO05D000427 9.6e-11 71.2 179 32.4
Nitab4.5_0000477g0210 Nicotiana tabacum HOM05D000535 ORTHO05D000427 9.6e-11 71.2 165 29.7
SGA_v2.0_scaffold238G43890 Striga asiatica HOM05D000535 ORTHO05D009010 1.3e-10 70.9 160 35.0
CSS0030185 Camellia sinensis var. sinensis HOM05D000535 ORTHO05D000427 1.6e-10 70.5 187 33.2
Nitab4.5_0000339g0150 Nicotiana tabacum HOM05D000535 ORTHO05D000427 2.1e-10 70.1 165 29.7
Cpa.g.sc2.361 Carica papaya HOM05D000535 ORTHO05D000427 3.7e-10 69.3 187 32.6
Hma1.2p1_0989F.1_g244870 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 4.8e-10 68.9 161 32.3
Potri.004G067600 Populus trichocarpa HOM05D000535 ORTHO05D000427 8.2e-10 68.2 157 33.1
Lj2g0005225 Lotus japonicus HOM05D000535 ORTHO05D000427 1.8e-09 67.0 191 31.9
Ciclev10024002m.g Citrus clementina HOM05D000535 ORTHO05D000427 2.4e-09 66.6 201 29.9
FAN13G1742 Fragaria x ananassa HOM05D000535 ORTHO05D000427 9.0e-09 64.7 174 32.8
THA.LOC104814041 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 9.0e-09 64.7 170 29.4
Sc14g0008170 Simmondsia chinensis HOM05D000535 ORTHO05D000427 1.2e-08 64.3 188 31.9
PGSC0003DMG400013701 Solanum tuberosum HOM05D000535 ORTHO05D000427 1.2e-08 64.3 160 30.0
VMungo0464G1244 Vigna mungo HOM05D000535 ORTHO05D000427 1.5e-08 63.9 167 32.9
Solyc03g019690.1 Solanum lycopersicum HOM05D010028 ORTHO05D012080 2.0e-08 63.5 179 34.6
Aa31LG4G3600 Aethionema arabicum HOM05D000535 ORTHO05D000427 5.8e-08 62.0 159 30.8
AUR62005428 Chenopodium quinoa HOM05D000535 ORTHO05D000427 5.8e-08 62.0 152 34.2
Solyc11g022590.1 Solanum lycopersicum HOM05D000535 ORTHO05D000427 5.8e-08 62.0 160 30.0
Lj2g0011821 Lotus japonicus HOM05D000535 ORTHO05D000427 7.6e-08 61.6 168 30.4
Gohir.A10G215032 Gossypium hirsutum HOM05D000535 ORTHO05D000427 1.7e-07 60.5 169 34.9
VMungo0464G0487 Vigna mungo HOM05D000535 ORTHO05D000427 2.9e-07 59.7 171 32.7
arahy.Tifrunner.gnm1.ann1.V48W00 Arachis hypogaea HOM05D000535 ORTHO05D000427 3.8e-07 59.3 161 32.9
MSTRG.11530 Avicennia marina HOM05D000535 ORTHO05D000427 3.8e-07 59.3 172 34.9
DCAR_026808 Daucus carota HOM05D000535 ORTHO05D000427 3.8e-07 59.3 185 28.6
CAN.G765.33 Capsicum annuum HOM05D000535 ORTHO05D011982 6.5e-07 58.5 141 30.5
COL.COLO4_17375 Corchorus olitorius HOM05D000535 ORTHO05D000427 8.4e-07 58.2 182 30.2
Duzib205G0258 Durio zibethinus HOM05D000535 ORTHO05D000427 8.4e-07 58.2 168 28.6
Hma1.2p1_0807F.1_g221380 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 8.4e-07 58.2 110 35.5
Glyma.09G163300 Glycine max HOM05D000535 ORTHO05D000427 1.1e-06 57.8 190 32.1
PGSC0003DMG400015267 Solanum tuberosum HOM05D010028 ORTHO05D012080 1.4e-06 57.4 155 34.8
Sopen03g029930 Solanum pennellii HOM05D010028 ORTHO05D012080 1.9e-06 57.0 179 33.5
MSTRG.11531 Avicennia marina HOM05D000535 ORTHO05D000427 2.5e-06 56.6 195 28.7
Manes.01G126000 Manihot esculenta HOM05D000535 ORTHO05D000427 2.5e-06 56.6 190 33.2
CAN.G861.43 Capsicum annuum HOM05D010028 ORTHO05D012080 3.2e-06 56.2 131 34.4
VMungo0464G0809 Vigna mungo HOM05D000535 ORTHO05D000427 3.2e-06 56.2 171 32.2
PGSC0003DMG400010170 Solanum tuberosum HOM05D000535 ORTHO05D011982 4.2e-06 55.8 183 30.6
EL10Ac9g20937 Beta vulgaris HOM05D000535 ORTHO05D000427 7.1e-06 55.1 161 29.2
CAN.G1611.13 Capsicum annuum HOM05D010028 ORTHO05D012080 7.1e-06 55.1 151 33.8
CAN.G765.34 Capsicum annuum HOM05D000535 ORTHO05D011982 7.1e-06 55.1 158 28.5
Glyma.09G155500 Glycine max HOM05D000535 ORTHO05D000427 7.1e-06 55.1 138 31.9


User provided reference genes

Program Settings