Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 3.4e-144 515.0 263 100.0
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 4.4e-99 365.2 286 72.0
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 1.8e-68 263.5 262 60.3
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 1.8e-68 263.5 262 60.3
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 4.0e-68 262.3 262 59.9
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 4.0e-68 262.3 262 59.9
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 5.2e-68 261.9 263 59.3
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 6.8e-68 261.5 262 59.5
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 6.8e-68 261.5 262 59.9
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 6.8e-68 261.5 262 59.9
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 6.8e-68 261.5 262 59.9
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 6.8e-68 261.5 262 59.5
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 1.2e-67 260.8 262 59.5
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.5e-67 260.4 268 59.7
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 2.0e-67 260.0 263 59.3
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 2.0e-67 260.0 262 59.2
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 2.0e-67 260.0 262 59.2
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 2.0e-67 260.0 262 59.2
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 2.6e-67 259.6 262 59.5
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 2.6e-67 259.6 262 59.5
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 3.4e-67 259.2 262 59.5
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 4.4e-67 258.8 262 58.8
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 4.4e-67 258.8 262 58.8
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 4.4e-67 258.8 262 58.8
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 4.4e-67 258.8 262 58.8
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 4.4e-67 258.8 262 58.8
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 5.7e-67 258.5 262 58.8
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 7.5e-67 258.1 263 58.9
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 7.5e-67 258.1 262 58.4
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 7.5e-67 258.1 262 58.4
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 1.3e-66 257.3 262 58.4
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 1.3e-66 257.3 262 58.8
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 1.7e-66 256.9 262 58.8
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 1.7e-66 256.9 262 58.0
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 1.7e-66 256.9 262 58.4
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 2.2e-66 256.5 262 58.0
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 2.8e-66 256.1 262 58.4
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 2.8e-66 256.1 262 59.2
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 2.8e-66 256.1 263 58.6
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 3.7e-66 255.8 262 58.0
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 4.9e-66 255.4 262 58.8
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 6.3e-66 255.0 268 58.2
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 8.3e-66 254.6 260 57.3
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 8.3e-66 254.6 260 58.5
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 8.3e-66 254.6 260 58.5
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 8.3e-66 254.6 260 58.5
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 8.3e-66 254.6 262 58.0
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 1.1e-65 254.2 262 57.6
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 1.1e-65 254.2 262 58.0
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 1.4e-65 253.8 262 57.3
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 1.4e-65 253.8 256 59.8
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 1.4e-65 253.8 262 57.6
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 1.8e-65 253.4 262 57.6
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 2.4e-65 253.1 261 58.6
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 3.1e-65 252.7 262 57.6
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 3.1e-65 252.7 262 57.6
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 3.1e-65 252.7 262 57.6
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 5.4e-65 251.9 262 57.6
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 7.0e-65 251.5 262 57.3
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 7.0e-65 251.5 258 57.4
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 9.2e-65 251.1 262 57.3
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 1.6e-64 250.4 262 57.3
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 1.0e-63 247.7 275 56.4
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 2.3e-63 246.5 262 56.1
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 2.9e-63 246.1 262 57.6
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 3.8e-63 245.7 275 56.0
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 3.8e-63 245.7 260 56.5
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 8.6e-63 244.6 261 57.5
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 1.9e-62 243.4 262 55.0
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 5.6e-62 241.9 262 55.0
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 7.3e-62 241.5 257 55.6
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 7.3e-62 241.5 261 56.7
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 2.8e-61 239.6 249 57.4
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 3.6e-61 239.2 280 52.9
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 8.9e-60 234.6 260 53.8
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 2.6e-59 233.0 249 55.8
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 5.7e-59 231.9 259 53.3
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 9.8e-59 231.1 269 54.6
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 6.4e-58 228.4 254 55.1
MELO3C020359.2 Cucumis melo HOM05D006777 ORTHO05D008360 1.4e-57 227.3 243 56.4
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 3.5e-56 222.6 256 53.5
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 4.6e-56 222.2 244 55.3
Sabra17G0050600 Salix brachista HOM05D006777 ORTHO05D008360 4.6e-56 222.2 240 57.1
Duzib212G0541 Durio zibethinus HOM05D006777 ORTHO05D008360 6.0e-56 221.9 239 56.9
CsaV3_3G018320 Cucumis sativus L. HOM05D006777 ORTHO05D008360 1.7e-55 220.3 239 56.1
unitig_37.g12031 Utricularia gibba HOM05D006777 ORTHO05D008360 1.7e-55 220.3 243 54.7
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 3.1e-52 209.5 262 49.6
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 8.9e-52 208.0 261 47.5
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 1.2e-51 207.6 232 54.7
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 4.4e-51 205.7 231 54.5
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 1.3e-50 204.1 231 54.1
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 2.2e-50 203.4 232 53.9
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 3.7e-50 202.6 231 53.7
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 6.4e-50 201.8 256 48.8
Haze_11625 Corylus avellana HOM05D006777 ORTHO05D008360 1.2e-48 197.6 302 47.4
Lj6A528G35 Lonicera japonica HOM05D006777 ORTHO05D008360 1.7e-47 193.7 191 60.2
CSS0009293 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 5.0e-47 192.2 199 58.3
CSS0028561 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 5.0e-47 192.2 199 58.3
PGSC0003DMG402004570 Solanum tuberosum HOM05D006777 ORTHO05D008360 6.6e-47 191.8 191 59.7
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 9.5e-46 188.0 220 53.6
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 2.1e-45 186.8 262 48.5
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 3.1e-44 183.0 262 47.3
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 1.5e-43 180.6 101 91.1
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 4.4e-43 179.1 260 46.2
SHI07424 Sapria himalayana HOM05D006777 ORTHO05D008360 2.9e-42 176.4 190 54.7
Haze_27630 Corylus avellana HOM05D006777 ORTHO05D008360 3.4e-35 152.9 262 38.9
Hma1.2p1_0187F.1_g082380 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 1.4e-33 147.5 201 48.8
CARHR220180 Cardamine hirsuta HOM05D006777 ORTHO05D008360 9.2e-33 144.8 202 48.0
CAN.G767.6 Capsicum annuum HOM05D006777 ORTHO05D008360 6.0e-32 142.1 75 93.3
ECA248G0011 Erigeron canadensis HOM05D006777 ORTHO05D008360 1.0e-31 141.4 75 93.3
Cre06.g260800 Chlamydomonas reinhardtii HOM05D006777 ORTHO05D008360 9.6e-30 134.8 258 36.0
Lj3P402T13 Lonicera japonica HOM05D006777 ORTHO05D008360 1.4e-25 120.9 73 82.2
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 7.1e-25 118.6 262 34.7
Sed0006533 Sechium edule HOM05D006777 ORTHO05D008360 9.3e-25 118.2 97 67.0
vmacro00459 Vaccinium macrocarpon HOM05D006777 ORTHO05D008360 1.6e-16 90.9 209 34.9
Cpa.g.c27575.2 Carica papaya HOM05D006777 ORTHO05D008360 3.0e-15 86.7 106 50.9
Cc00_g31310 Coffea canephora HOM05D006777 ORTHO05D008360 3.9e-15 86.3 141 43.3
Cc03_g11170 Coffea canephora HOM05D006777 ORTHO05D008360 1.9e-14 84.0 43 90.7
CSS0011736 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 4.0e-12 76.3 38 86.8
CSS0009674 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 1.1e-09 68.2 39 79.5
Lj3A409T19 Lonicera japonica HOM05D006777 ORTHO05D008360 1.1e-06 58.2 55 58.2


User provided reference genes

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