Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold14G07032 Striga asiatica HOM05D006157 ORTHO05D007826 1.5e-113 412.9 211 100.0
MSTRG.25101 Avicennia marina HOM05D006157 ORTHO05D007826 2.5e-52 209.5 211 58.3
Nitab4.5_0001101g0070 Nicotiana tabacum HOM05D006157 ORTHO05D007826 1.3e-45 187.2 207 46.4
Nitab4.5_0000686g0050 Nicotiana tabacum HOM05D006157 ORTHO05D007826 1.7e-45 186.8 207 46.4
PGSC0003DMG400036180 Solanum tuberosum HOM05D006157 ORTHO05D007826 3.8e-45 185.7 207 47.8
Sopen04g032780 Solanum pennellii HOM05D006157 ORTHO05D007826 2.1e-43 179.9 208 48.1
Dinv35975 Davidia involucrata HOM05D006157 ORTHO05D007826 6.1e-43 178.3 222 50.5
Cc10_g04340 Coffea canephora HOM05D006157 ORTHO05D007826 3.9e-42 175.6 238 44.5
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 1.1e-41 174.1 203 48.8
Migut.C00597 Erythranthe guttata HOM05D006157 ORTHO05D007826 7.4e-41 171.4 214 48.6
ECA232G2668 Erigeron canadensis HOM05D006157 ORTHO05D007826 1.3e-40 170.6 211 51.7
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 2.2e-40 169.9 207 47.3
HanXRQChr09g0267931 Helianthus annuus HOM05D006157 ORTHO05D007826 2.8e-40 169.5 219 45.7
CSS0004131 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 4.8e-40 168.7 225 44.9
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 6.3e-40 168.3 206 47.6
Lsat_1_v5_gn_4_124041 Lactuca sativa HOM05D006157 ORTHO05D007826 1.5e-38 163.7 219 44.7
Manes.18G032700 Manihot esculenta HOM05D006157 ORTHO05D007826 1.5e-38 163.7 210 48.1
SalBow8G3379 Salvia bowleyana HOM05D006157 ORTHO05D007826 2.6e-38 162.9 212 49.5
Hma1.2p1_0718F.1_g208450 Hydrangea macrophylla HOM05D006157 ORTHO05D007826 7.7e-38 161.4 205 46.3
Peaxi162Scf00528g00414 Petunia axillaris HOM05D006157 ORTHO05D007826 1.7e-37 160.2 201 43.3
TWI56G1258 Tripterygium wilfordii HOM05D006157 ORTHO05D007826 2.2e-37 159.8 213 42.7
Gohir.A06G017000 Gossypium hirsutum HOM05D006157 ORTHO05D007826 1.9e-36 156.8 214 42.1
Gohir.D06G015100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 3.2e-36 156.0 214 43.0
Gorai.010G017900 Gossypium raimondii HOM05D006157 ORTHO05D007826 5.5e-36 155.2 214 42.5
Sabra14G0022700 Salix brachista HOM05D006157 ORTHO05D007826 5.5e-36 155.2 214 43.9
Duzib116G0710 Durio zibethinus HOM05D006157 ORTHO05D007826 7.2e-36 154.8 218 43.1
Potri.014G032300 Populus trichocarpa HOM05D006157 ORTHO05D007826 6.1e-35 151.8 214 44.4
MELO3C010885.2 Cucumis melo HOM05D006157 ORTHO05D007826 1.0e-34 151.0 216 43.1
GSVIVG01009525001 Vitis vinifera HOM05D006157 ORTHO05D007826 1.4e-34 150.6 214 46.3
Ciclev10002442m.g Citrus clementina HOM05D006157 ORTHO05D007826 3.0e-34 149.4 217 43.8
QL02p005407 Quercus lobata HOM05D006157 ORTHO05D007826 3.0e-34 149.4 211 42.7
Potri.002G127800 Populus trichocarpa HOM05D006157 ORTHO05D007826 3.9e-34 149.1 212 42.0
Rhsim06G0048100 Rhododendron simsii HOM05D006157 ORTHO05D007826 5.1e-34 148.7 215 45.1
Prupe.1G438800 Prunus persica HOM05D006157 ORTHO05D007826 6.7e-34 148.3 212 43.9
Solyc04g079170.4 Solanum lycopersicum HOM05D006157 ORTHO05D007826 6.7e-34 148.3 191 45.5
Cfa018525 Carpinus fangiana HOM05D006157 ORTHO05D007826 8.8e-34 147.9 210 43.8
Sed0006561 Sechium edule HOM05D006157 ORTHO05D007826 8.8e-34 147.9 214 41.6
Sopen12g030790 Solanum pennellii HOM05D006157 ORTHO05D007826 1.1e-33 147.5 211 39.8
Actinidia23263 Actinidia chinensis HOM05D006157 ORTHO05D007826 1.5e-33 147.1 219 43.4
CsaV3_2G028070 Cucumis sativus L. HOM05D006157 ORTHO05D007826 1.5e-33 147.1 215 41.9
Sed0015883 Sechium edule HOM05D006157 ORTHO05D007826 1.5e-33 147.1 214 42.5
Haze_17545 Corylus avellana HOM05D006157 ORTHO05D007826 3.3e-33 146.0 210 43.3
Haze_17554 Corylus avellana HOM05D006157 ORTHO05D007826 3.3e-33 146.0 210 43.3
Gohir.D02G092100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 4.3e-33 145.6 212 42.9
Gorai.005G103500 Gossypium raimondii HOM05D006157 ORTHO05D007826 7.4e-33 144.8 212 42.5
Lj4C53T12 Lonicera japonica HOM05D006157 ORTHO05D007826 7.4e-33 144.8 204 48.5
Manes.05G171900 Manihot esculenta HOM05D006157 ORTHO05D007826 7.4e-33 144.8 210 41.0
Manes.05G171901 Manihot esculenta HOM05D006157 ORTHO05D007826 7.4e-33 144.8 210 41.0
Migut.N02699 Erythranthe guttata HOM05D006157 ORTHO05D007826 1.7e-32 143.7 219 46.1
Gohir.A03G079324 Gossypium hirsutum HOM05D006157 ORTHO05D007826 2.8e-32 142.9 212 42.5
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 2.8e-32 142.9 171 46.8
vmacro21540 Vaccinium macrocarpon HOM05D006157 ORTHO05D007826 6.3e-32 141.7 215 42.3
CiPaw.15G061800 Carya illinoinensis HOM05D006157 ORTHO05D007826 8.2e-32 141.4 216 43.5
RcHm_v2.0_Chr6g0307431 Rosa chinensis HOM05D006157 ORTHO05D007826 1.1e-31 141.0 213 42.3
MD15G1085000 Malus domestica HOM05D006157 ORTHO05D007826 1.4e-31 140.6 214 43.0
Nn5g30225 Nelumbo nucifera HOM05D006157 ORTHO05D007826 2.4e-31 139.8 212 43.9
PGR083G2028 Punica granatum HOM05D006157 ORTHO05D007826 1.5e-30 137.1 214 43.9
Glyma.04G037500 Glycine max HOM05D006157 ORTHO05D007826 2.0e-30 136.7 203 43.3
Medtr1g019800 Medicago truncatula HOM05D006157 ORTHO05D007826 3.4e-30 136.0 205 41.0
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 1.0e-29 134.4 209 41.6
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 1.3e-29 134.0 209 40.2
EL10Ac1g01781 Beta vulgaris HOM05D006157 ORTHO05D007826 1.7e-29 133.7 224 37.9
Ca_13302_v3 Cicer arietinum L. HOM05D006157 ORTHO05D007826 2.9e-29 132.9 225 38.2
VMungo1309G0335 Vigna mungo HOM05D006157 ORTHO05D007826 8.5e-29 131.3 207 44.0
Cpa.g.c24415.4 Carica papaya HOM05D006157 ORTHO05D007826 1.4e-28 130.6 204 39.7
MD08G1103700 Malus domestica HOM05D006157 ORTHO05D007826 1.4e-28 130.6 213 39.9
FAN27G0611 Fragaria x ananassa HOM05D006157 ORTHO05D007826 2.5e-28 129.8 209 39.7
Nn1g05836 Nelumbo nucifera HOM05D006157 ORTHO05D007826 2.5e-28 129.8 213 39.4
TAR628G1181 Trochodendron aralioides HOM05D006157 ORTHO05D007826 2.5e-28 129.8 210 42.4
Eucgr.F00242 Eucalyptus grandis HOM05D006157 ORTHO05D007826 3.2e-28 129.4 210 44.8
TPR.G13684 Trifolium pratense HOM05D006157 ORTHO05D007826 3.2e-28 129.4 205 40.0
ClCG08G015710 Citrullus lanatus HOM05D006157 ORTHO05D007826 4.2e-28 129.0 200 42.0
Phvul.009G063700 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 4.2e-28 129.0 206 43.2
Glyma.06G038400 Glycine max HOM05D006157 ORTHO05D007826 5.5e-28 128.6 201 43.3
Psat6g012720 Pisum sativum HOM05D006157 ORTHO05D007826 1.6e-27 127.1 206 41.3
Atru.chr13.647 Acer truncatum HOM05D006157 ORTHO05D007826 2.1e-27 126.7 220 39.5
FvH4_2g34660 Fragaria vesca HOM05D006157 ORTHO05D007826 2.1e-27 126.7 213 39.9
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 6.1e-27 125.2 148 44.6
CANSAT54G0006 Cannabis sativa HOM05D006157 ORTHO05D007826 2.3e-26 123.2 204 42.6
PGSC0003DMG400015419 Solanum tuberosum HOM05D006157 ORTHO05D007826 5.1e-26 122.1 145 45.5
Glyma.17G243500 Glycine max HOM05D006157 ORTHO05D007826 1.1e-25 120.9 208 43.3
AUR62022432 Chenopodium quinoa HOM05D006157 ORTHO05D007826 1.5e-25 120.6 220 35.9
Lj5g0002869 Lotus japonicus HOM05D006157 ORTHO05D007826 1.5e-25 120.6 208 37.5
Glyma.14G081800 Glycine max HOM05D006157 ORTHO05D007826 2.0e-25 120.2 204 43.1
Lalb_Chr14g0368791 Lupinus albus HOM05D006157 ORTHO05D007826 2.6e-25 119.8 201 39.3
VMungo0647G0691 Vigna mungo HOM05D006157 ORTHO05D007826 4.4e-25 119.0 206 43.7
Aqoxy6G01361 Aquilegia oxysepala HOM05D006157 ORTHO05D007826 7.4e-25 118.2 209 41.1
Thecc.08G011200 Theobroma cacao HOM05D006157 ORTHO05D007826 9.7e-25 117.9 158 43.0
AUR62039307 Chenopodium quinoa HOM05D006157 ORTHO05D007826 1.1e-23 114.4 220 34.1
Phvul.001G020800 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 1.4e-23 114.0 201 42.8
THA.LOC104806945 Tarenaya hassleriana HOM05D006157 ORTHO05D007826 1.0e-21 107.8 211 36.0
MBI02_g17343_MAGBIO Magnolia biondii HOM05D006157 ORTHO05D007826 1.9e-20 103.6 206 32.5
A10p06400 Brassica napus HOM05D006157 ORTHO05D007826 1.0e-18 97.8 201 36.3
Ah.05g168840 Amaranthus hybridus HOM05D006157 ORTHO05D007826 4.0e-18 95.9 172 39.5
BcaB07g33839 Brassica carinata HOM05D006157 ORTHO05D007826 8.8e-18 94.7 204 35.3
BolSC99t61279H Brassica oleracea HOM05D006157 ORTHO05D007826 1.1e-17 94.4 201 37.3
C06p01910 Brassica napus HOM05D006157 ORTHO05D007826 1.5e-17 94.0 201 37.3
Sp1g34500 Schrenkiella parvula HOM05D006157 ORTHO05D007826 1.5e-17 94.0 197 36.5
SpUn0102_0020 Schrenkiella parvula HOM05D006157 ORTHO05D007826 1.5e-17 94.0 197 36.5
Sc02g0007020 Simmondsia chinensis HOM05D006157 ORTHO05D007826 1.5e-17 94.0 220 30.9
Aa31sc924G20 Aethionema arabicum HOM05D006157 ORTHO05D007826 7.5e-17 91.7 213 33.3
PSO541G3363 Papaver somniferum HOM05D006157 ORTHO05D007826 1.3e-16 90.9 211 34.6
COL.COLO4_26474 Corchorus olitorius HOM05D006157 ORTHO05D007826 2.8e-16 89.7 208 30.8
Carub.0001s3622 Capsella rubella HOM05D006157 ORTHO05D007826 3.7e-16 89.4 199 32.7
AUR62019555 Chenopodium quinoa HOM05D006157 ORTHO05D007826 4.8e-16 89.0 153 36.6
BcaC08g42947 Brassica carinata HOM05D006157 ORTHO05D007826 1.1e-15 87.8 108 47.2
Thhalv10011797m.g Eutrema salsugineum HOM05D006157 ORTHO05D007826 9.1e-15 84.7 199 32.2
AL1G53700 Arabidopsis lyrata HOM05D006157 ORTHO05D007826 2.6e-14 83.2 195 32.3
Actinidia22616 Actinidia chinensis HOM05D006157 ORTHO05D007826 3.5e-14 82.8 158 37.3
AT1G47410 Arabidopsis thaliana HOM05D006157 ORTHO05D007826 4.5e-14 82.4 202 32.7
CARHR037020 Cardamine hirsuta HOM05D006157 ORTHO05D007826 1.7e-13 80.5 197 34.0
PSO675G5393 Papaver somniferum HOM05D006157 ORTHO05D007826 1.2e-11 74.3 160 34.4
arahy.Tifrunner.gnm1.ann1.HUL940 Arachis hypogaea HOM05D006157 ORTHO05D007826 1.0e-10 71.2 210 31.4
arahy.Tifrunner.gnm1.ann1.R9H0NA Arachis hypogaea HOM05D006157 ORTHO05D007826 1.0e-10 71.2 210 31.4
SalBow8G4867 Salvia bowleyana HOM05D006157 ORTHO05D007826 1.0e-10 71.2 144 36.8
unitig_22.g6773 Utricularia gibba HOM05D006157 ORTHO05D007826 2.6e-09 66.6 157 36.3
Duzib093G2157 Durio zibethinus HOM05D006157 ORTHO05D007826 1.7e-08 63.9 93 43.0
Zm00001eb100900 Zea mays HOM05D006157 ORTHO05D007826 3.1e-07 59.7 34 70.6
CSS0005922 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 7.0e-07 58.5 138 31.2
Os09g0460100 Oryza sativa ssp. japonica HOM05D006157 ORTHO05D007826 7.0e-07 58.5 206 27.7
ATR0100G006 Amborella trichopoda HOM05D006157 ORTHO05D007826 9.1e-07 58.2 157 26.1
Zm00001eb315050 Zea mays HOM05D006157 ORTHO05D007826 9.1e-07 58.2 212 25.0
ATR0100G061 Amborella trichopoda HOM05D006157 ORTHO05D007826 2.0e-06 57.0 157 27.4


User provided reference genes

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