Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold14G07009 Striga asiatica HOM05D008210 ORTHO05D010078 8.8e-54 213.4 109 100.0
MSTRG.22279 Avicennia marina HOM05D008210 ORTHO05D010078 3.0e-14 82.0 114 49.1
Gorai.010G013900 Gossypium raimondii HOM05D008210 ORTHO05D010078 8.9e-14 80.5 92 47.8
Aqoxy2G03320 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 4.4e-13 78.2 109 45.9
Aqoxy6G00952 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 4.4e-13 78.2 109 45.9
Lsat_1_v5_gn_1_19601 Lactuca sativa HOM05D008210 ORTHO05D010078 4.4e-13 78.2 107 43.9
Cpa.g.sc64.23 Carica papaya HOM05D008210 ORTHO05D010078 2.9e-12 75.5 90 48.9
Migut.N02682 Erythranthe guttata HOM05D008210 ORTHO05D010078 4.9e-12 74.7 50 72.0
Nitab4.5_0000110g0010 Nicotiana tabacum HOM05D008210 ORTHO05D010078 4.9e-12 74.7 113 44.2
COL.COLO4_26398 Corchorus olitorius HOM05D008210 ORTHO05D010078 1.9e-11 72.8 82 47.6
Thecc.08G019400 Theobroma cacao HOM05D008210 ORTHO05D010078 1.9e-11 72.8 78 53.8
SalBow8G0954 Salvia bowleyana HOM05D008210 ORTHO05D010078 5.4e-11 71.2 78 57.7
Atru.chr13.581 Acer truncatum HOM05D008210 ORTHO05D010078 9.2e-11 70.5 79 51.9
Haze_17600 Corylus avellana HOM05D008210 ORTHO05D010078 9.2e-11 70.5 115 41.7
Ciclev10002912m.g Citrus clementina HOM05D008210 ORTHO05D010078 1.2e-10 70.1 93 48.4
Cc10_g03600 Coffea canephora HOM05D008210 ORTHO05D010078 1.2e-10 70.1 110 41.8
Gohir.A06G013600 Gossypium hirsutum HOM05D008210 ORTHO05D010078 1.6e-10 69.7 92 43.5
Sabra14G0027900 Salix brachista HOM05D008210 ORTHO05D010078 4.6e-10 68.2 104 43.3
Rhsim06G0039800 Rhododendron simsii HOM05D008210 ORTHO05D010078 6.0e-10 67.8 114 42.1
QL02p006968 Quercus lobata HOM05D008210 ORTHO05D010078 7.8e-10 67.4 93 48.4
VMungo1309G3066 Vigna mungo HOM05D008210 ORTHO05D010078 7.8e-10 67.4 107 41.1
Ah.09g236870 Amaranthus hybridus HOM05D008210 ORTHO05D010078 1.0e-09 67.0 95 44.2
Ah.09g236890 Amaranthus hybridus HOM05D008210 ORTHO05D010078 1.0e-09 67.0 95 44.2
Dinv36022 Davidia involucrata HOM05D000260 ORTHO05D002276 1.0e-09 67.0 94 42.6
Aqoxy6G00950 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 1.3e-09 66.6 78 48.7
Medtr3g111460 Medicago truncatula HOM05D008210 ORTHO05D010078 1.3e-09 66.6 107 41.1
Gohir.D06G011200 Gossypium hirsutum HOM05D008210 ORTHO05D010078 1.7e-09 66.2 92 43.5
Atru.chr13.582 Acer truncatum HOM05D008210 ORTHO05D010078 2.3e-09 65.9 79 48.1
Cfa018466 Carpinus fangiana HOM05D008210 ORTHO05D010078 2.3e-09 65.9 118 38.1
ECA247G0280 Erigeron canadensis HOM05D008210 ORTHO05D010078 3.9e-09 65.1 94 42.6
Prupe.1G386500 Prunus persica HOM05D008210 ORTHO05D010078 6.6e-09 64.3 93 45.2
Psat0s3268g0120 Pisum sativum HOM05D008210 ORTHO05D010078 1.1e-08 63.5 104 41.3
FvH4_2g40530 Fragaria vesca HOM05D008210 ORTHO05D010078 1.5e-08 63.2 79 46.8
Glyma.04G035200 Glycine max HOM05D008210 ORTHO05D010078 1.5e-08 63.2 93 46.2
TPR.G12346 Trifolium pratense HOM05D008210 ORTHO05D010078 1.5e-08 63.2 105 44.8
Phvul.009G061375 Phaseolus vulgaris HOM05D008210 ORTHO05D010078 2.5e-08 62.4 106 39.6
FAN15G3542 Fragaria x ananassa HOM05D008210 ORTHO05D010078 3.3e-08 62.0 81 44.4
Lj1g0017592 Lotus japonicus HOM05D008210 ORTHO05D010078 3.3e-08 62.0 76 48.7
Manes.05G166500 Manihot esculenta HOM05D008210 ORTHO05D010078 3.3e-08 62.0 92 42.4
Potri.002G130500 Populus trichocarpa HOM05D008210 ORTHO05D010078 3.3e-08 62.0 113 38.1
TAR381G1599 Trochodendron aralioides HOM05D008210 ORTHO05D010078 4.3e-08 61.6 115 35.7
Nn5g29422 Nelumbo nucifera HOM05D008210 ORTHO05D010078 5.6e-08 61.2 109 42.2
Hma1.2p1_0023F.1_g015200 Hydrangea macrophylla HOM05D008210 ORTHO05D010078 9.5e-08 60.5 120 39.2
Potri.014G038500 Populus trichocarpa HOM05D008210 ORTHO05D010078 3.6e-07 58.5 105 41.0
RcHm_v2.0_Chr6g0300191 Rosa chinensis HOM05D008210 ORTHO05D010078 3.6e-07 58.5 81 42.0
Dinv39913 Davidia involucrata HOM05D008334 ORTHO05D010366 6.2e-07 57.8 74 50.0
Os12g0594950 Oryza sativa ssp. japonica HOM05D035197 ORTHO05D037089 6.2e-07 57.8 113 39.8
EL10Ac8g19959 Beta vulgaris HOM05D008210 ORTHO05D010078 8.0e-07 57.4 109 43.1
Eucgr.F01503 Eucalyptus grandis HOM05D008210 ORTHO05D010078 1.4e-06 56.6 99 38.4
TAR628G0004 Trochodendron aralioides HOM05D008210 ORTHO05D010078 1.4e-06 56.6 66 53.0
Glyma.06G035100 Glycine max HOM05D008210 ORTHO05D010078 1.8e-06 56.2 76 48.7
arahy.Tifrunner.gnm1.ann1.KBQ6U1 Arachis hypogaea HOM05D008210 ORTHO05D010078 2.3e-06 55.8 104 34.6
MBI16_g31333_MAGBIO Magnolia biondii HOM05D008210 ORTHO05D010078 2.3e-06 55.8 100 42.0
GSVIVG01009614001 Vitis vinifera HOM05D008210 ORTHO05D010078 6.8e-06 54.3 111 36.9


User provided reference genes

Program Settings