Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold14G06904 Striga asiatica HOM05D005909 ORTHO05D007481 7.6e-127 457.2 236 100.0
SalBow8G3248 Salvia bowleyana HOM05D005909 ORTHO05D007481 7.8e-108 394.0 233 85.4
MSTRG.13555 Avicennia marina HOM05D005909 ORTHO05D007481 2.8e-105 385.6 234 84.6
SalBow8G0352 Salvia bowleyana HOM05D005909 ORTHO05D007481 8.1e-105 384.0 240 82.5
Nitab4.5_0002112g0090 Nicotiana tabacum HOM05D005909 ORTHO05D007481 2.8e-97 359.0 233 76.4
QL01p010815 Quercus lobata HOM05D005909 ORTHO05D007481 6.2e-97 357.8 235 77.9
QL93p0145_0024 Quercus lobata HOM05D005909 ORTHO05D007481 6.2e-97 357.8 235 77.9
Sopen05g004630 Solanum pennellii HOM05D005909 ORTHO05D007481 1.1e-96 357.1 233 76.4
CAN.G610.24 Capsicum annuum HOM05D005909 ORTHO05D007481 1.4e-96 356.7 229 77.7
Nitab4.5_0000694g0120 Nicotiana tabacum HOM05D005909 ORTHO05D007481 1.4e-96 356.7 233 76.4
Solyc05g008870.3 Solanum lycopersicum HOM05D005909 ORTHO05D007481 2.4e-96 355.9 233 76.0
Cc11_g09670 Coffea canephora HOM05D005909 ORTHO05D007481 5.3e-96 354.8 232 77.2
GSVIVG01011843001 Vitis vinifera HOM05D005909 ORTHO05D007481 5.3e-96 354.8 236 77.5
CSS0033004 Camellia sinensis var. sinensis HOM05D005909 ORTHO05D007481 6.9e-96 354.4 235 77.0
Migut.E00369 Erythranthe guttata HOM05D005909 ORTHO05D007481 2.0e-95 352.8 281 68.3
Oeu027686.1 Olea europaea HOM05D005909 ORTHO05D007481 2.0e-95 352.8 308 62.7
Thecc.02G222000 Theobroma cacao HOM05D005909 ORTHO05D007481 1.3e-94 350.1 233 76.4
TWI79G1572 Tripterygium wilfordii HOM05D005909 ORTHO05D007481 1.7e-94 349.7 230 77.0
Actinidia14921 Actinidia chinensis HOM05D005909 ORTHO05D007481 2.2e-94 349.4 235 77.4
Hma1.2p1_2306F.1_g319360 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 1.1e-93 347.1 231 76.2
Hma1.2p1_1314F.1_g274990 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 1.9e-93 346.3 231 75.8
Prupe.1G316800 Prunus persica HOM05D005909 ORTHO05D007481 1.9e-93 346.3 231 75.3
Haze_00654 Corylus avellana HOM05D005909 ORTHO05D007481 4.2e-93 345.1 235 76.2
TAR622G1259 Trochodendron aralioides HOM05D005909 ORTHO05D007481 9.3e-93 344.0 229 73.8
COL.COLO4_32148 Corchorus olitorius HOM05D005909 ORTHO05D007481 1.6e-92 343.2 233 74.2
Atru.chr11.237 Acer truncatum HOM05D005909 ORTHO05D007481 3.5e-92 342.0 235 77.0
Duzib248G1493 Durio zibethinus HOM05D005909 ORTHO05D007481 3.5e-92 342.0 241 73.0
Nn4g23953 Nelumbo nucifera HOM05D005909 ORTHO05D007481 6.0e-92 341.3 231 74.5
vmacro10599 Vaccinium macrocarpon HOM05D005909 ORTHO05D007481 7.9e-92 340.9 235 73.2
Ciclev10015519m.g Citrus clementina HOM05D005909 ORTHO05D007481 1.3e-91 340.1 236 74.2
Aqoxy3G04056 Aquilegia oxysepala HOM05D005909 ORTHO05D007481 2.3e-91 339.3 235 73.6
Lsat_1_v5_gn_3_62021 Lactuca sativa HOM05D005909 ORTHO05D007481 5.1e-91 338.2 236 73.3
RcHm_v2.0_Chr4g0434411 Rosa chinensis HOM05D005909 ORTHO05D007481 8.7e-91 337.4 236 72.9
Potri.010G120200 Populus trichocarpa HOM05D005909 ORTHO05D007481 3.3e-90 335.5 234 73.5
FvH4_4g26720 Fragaria vesca HOM05D005909 ORTHO05D007481 4.3e-90 335.1 237 72.2
Lj5g0016761 Lotus japonicus HOM05D005909 ORTHO05D007481 4.3e-90 335.1 229 72.9
Rhsim09G0103900 Rhododendron simsii HOM05D005909 ORTHO05D007481 7.4e-90 334.3 251 69.7
MD16G1037200 Malus domestica HOM05D005909 ORTHO05D007481 9.6e-90 334.0 236 71.2
Sabra10G0090400 Salix brachista HOM05D005909 ORTHO05D007481 1.3e-89 333.6 236 72.9
HanXRQChr15g0477421 Helianthus annuus HOM05D005909 ORTHO05D007481 1.6e-89 333.2 237 71.7
Eucgr.G02238 Eucalyptus grandis HOM05D005909 ORTHO05D007481 2.8e-89 332.4 231 73.6
Ca_06889_v3 Cicer arietinum L. HOM05D005909 ORTHO05D007481 6.2e-89 331.3 230 73.5
Gohir.D02G171900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 8.2e-89 330.9 235 73.6
PSO782G5715 Papaver somniferum HOM05D005909 ORTHO05D007481 1.8e-88 329.7 230 73.5
ClCG01G005900 Citrullus lanatus HOM05D005909 ORTHO05D007481 2.4e-88 329.3 235 71.1
PSO063G1187 Papaver somniferum HOM05D005909 ORTHO05D007481 2.4e-88 329.3 230 74.3
Glyma.20G120600 Glycine max HOM05D005909 ORTHO05D007481 3.1e-88 328.9 230 71.3
TPR.G4906 Trifolium pratense HOM05D005909 ORTHO05D007481 3.1e-88 328.9 229 73.4
Hund20744 Selenicereus undatus HOM05D005909 ORTHO05D007481 4.1e-88 328.6 235 70.2
DCAR_007264 Daucus carota HOM05D005909 ORTHO05D007481 5.3e-88 328.2 236 72.0
MELO3C005340.2 Cucumis melo HOM05D005909 ORTHO05D007481 1.2e-87 327.0 235 70.2
Lalb_Chr21g0308731 Lupinus albus HOM05D005909 ORTHO05D007481 1.2e-87 327.0 229 71.2
CiPaw.05G242600 Carya illinoinensis HOM05D005909 ORTHO05D007481 1.5e-87 326.6 235 70.2
Gorai.005G193400 Gossypium raimondii HOM05D005909 ORTHO05D007481 3.4e-87 325.5 241 71.4
Gohir.A03G148900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 1.0e-86 323.9 242 71.9
unitig_699.g19483 Utricularia gibba HOM05D005909 ORTHO05D007481 1.0e-86 323.9 234 71.8
arahy.Tifrunner.gnm1.ann1.IU6D7D Arachis hypogaea HOM05D005909 ORTHO05D007481 1.7e-86 323.2 233 71.7
CsaV3_5G028790 Cucumis sativus L. HOM05D005909 ORTHO05D007481 2.9e-86 322.4 235 68.9
MBI16_g44832_MAGBIO Magnolia biondii HOM05D005909 ORTHO05D007481 3.8e-86 322.0 231 71.0
PGR119G2457 Punica granatum HOM05D005909 ORTHO05D007481 3.8e-86 322.0 236 71.2
ECA246G0525 Erigeron canadensis HOM05D005909 ORTHO05D007481 5.0e-86 321.6 232 70.7
Cfa015837 Carpinus fangiana HOM05D005909 ORTHO05D007481 6.5e-86 321.2 235 71.9
arahy.Tifrunner.gnm1.ann1.W577BF Arachis hypogaea HOM05D005909 ORTHO05D007481 1.1e-85 320.5 230 71.7
THA.LOC104823950 Tarenaya hassleriana HOM05D005909 ORTHO05D007481 2.5e-85 319.3 237 69.6
Medtr1g109590 Medicago truncatula HOM05D005909 ORTHO05D007481 3.2e-85 318.9 234 70.1
VMungo0720G1068 Vigna mungo HOM05D005909 ORTHO05D007481 4.2e-85 318.5 230 69.6
Psat6g224680 Pisum sativum HOM05D005909 ORTHO05D007481 7.1e-85 317.8 234 70.9
Sc14g0007280 Simmondsia chinensis HOM05D005909 ORTHO05D007481 3.5e-84 315.5 235 69.8
CARHR143760 Cardamine hirsuta HOM05D005909 ORTHO05D007481 1.8e-83 313.2 234 67.5
Sed0017467 Sechium edule HOM05D005909 ORTHO05D007481 1.8e-83 313.2 235 67.7
BcaC06g34207 Brassica carinata HOM05D005909 ORTHO05D007481 3.9e-83 312.0 230 68.3
AUR62037268 Chenopodium quinoa HOM05D005909 ORTHO05D007481 3.9e-83 312.0 231 68.0
CDE08G1136 Ceratophyllum demersum HOM05D005909 ORTHO05D007481 5.1e-83 311.6 231 65.8
EL10Ac6g14305 Beta vulgaris HOM05D005909 ORTHO05D007481 6.7e-83 311.2 231 67.1
AUR62002812 Chenopodium quinoa HOM05D005909 ORTHO05D007481 6.7e-83 311.2 232 68.1
Phvul.007G032000 Phaseolus vulgaris HOM05D005909 ORTHO05D007481 6.7e-83 311.2 230 69.1
Actinidia16683 Actinidia chinensis HOM05D005909 ORTHO05D007481 1.9e-82 309.7 233 71.2
Sp2g12680 Schrenkiella parvula HOM05D005909 ORTHO05D007481 2.5e-82 309.3 230 66.1
BraA06t27329Z Brassica rapa HOM05D005909 ORTHO05D007481 4.3e-82 308.5 237 66.2
C07p31670 Brassica napus HOM05D005909 ORTHO05D007481 7.4e-82 307.8 231 68.0
BolC7t43706H Brassica oleracea HOM05D005909 ORTHO05D007481 7.4e-82 307.8 231 68.0
A06p44550 Brassica napus HOM05D005909 ORTHO05D007481 1.6e-81 306.6 235 66.4
AL5G10170 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 1.8e-80 303.1 236 65.7
Os01g0691500 Oryza sativa ssp. japonica HOM05D005909 ORTHO05D007481 4.1e-80 302.0 235 68.1
Aa31LG2G8670 Aethionema arabicum HOM05D005909 ORTHO05D007481 1.2e-79 300.4 234 64.1
ATR0807G244 Amborella trichopoda HOM05D005909 ORTHO05D007481 2.6e-79 299.3 232 66.8
Peaxi162Scf00179g00534 Petunia axillaris HOM05D005909 ORTHO05D007481 4.5e-79 298.5 194 77.8
Lj6A753G52 Lonicera japonica HOM05D005909 ORTHO05D007481 5.9e-79 298.1 231 68.4
AT2G01220 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 7.7e-79 297.7 234 65.4
HPP92_024514 Vanilla planifolia HOM05D005909 ORTHO05D007481 7.7e-79 297.7 235 65.1
AL5G17030 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 1.7e-78 296.6 235 63.4
Zm00001eb360650 Zea mays HOM05D005909 ORTHO05D007481 2.9e-78 295.8 234 67.5
AT3G27610 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 1.9e-77 293.1 230 64.8
Carub.0005s0605 Capsella rubella HOM05D005909 ORTHO05D007481 7.2e-77 291.2 231 63.2
CARHR148990 Cardamine hirsuta HOM05D005909 ORTHO05D007481 2.7e-76 289.3 230 63.5
Ah.03g138370 Amaranthus hybridus HOM05D005909 ORTHO05D007481 4.3e-74 282.0 208 69.2
Cpa.g.sc65.66 Carica papaya HOM05D005909 ORTHO05D007481 2.2e-73 279.6 233 62.2
Dinv16136 Davidia involucrata HOM05D005909 ORTHO05D007481 4.8e-73 278.5 231 68.0
Thhalv10000909m.g Eutrema salsugineum HOM05D005909 ORTHO05D007481 2.4e-72 276.2 234 62.8
Dinv31596 Davidia involucrata HOM05D005909 ORTHO05D007481 1.3e-70 270.4 183 76.5
Carub.0005s0593 Capsella rubella HOM05D005909 ORTHO05D007481 1.5e-66 256.9 228 60.1
AagrBONN_evm.TU.Sc2ySwM_362.1435 Anthoceros agrestis HOM05D004406 ORTHO05D005660 1.1e-64 250.8 234 55.6
Mapoly0100s0051 Marchantia polymorpha HOM05D005909 ORTHO05D007481 1.5e-63 246.9 236 57.6
FAN07G1481 Fragaria x ananassa HOM05D005909 ORTHO05D007481 1.3e-62 243.8 208 63.0
Manes.06G064900 Manihot esculenta HOM05D005909 ORTHO05D007481 1.6e-60 236.9 161 73.9
PGSC0003DMG401030529 Solanum tuberosum HOM05D005909 ORTHO05D007481 2.1e-60 236.5 151 78.8
Pp3c3_16750 Physcomitrium patens HOM05D005909 ORTHO05D007481 2.7e-60 236.1 235 53.6
Pp3c12_7340 Physcomitrium patens HOM05D005909 ORTHO05D007481 2.6e-58 229.6 240 52.9
SMO196G0003 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 1.3e-57 227.3 254 48.4
SEGI_08541 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 2.5e-53 213.0 153 69.3
FAN12G0127 Fragaria x ananassa HOM05D005909 ORTHO05D007481 4.0e-51 205.7 147 71.4
FAN22G0620 Fragaria x ananassa HOM05D005909 ORTHO05D007481 3.4e-50 202.6 147 70.1
Oeu027687.1 Olea europaea HOM05D005909 ORTHO05D007481 1.4e-48 197.2 114 86.8
FAN12G0185 Fragaria x ananassa HOM05D005909 ORTHO05D007481 1.2e-44 184.1 163 60.1
CANSAT01G0643 Cannabis sativa HOM05D005909 ORTHO05D007481 1.2e-34 151.0 115 67.0
MCO06G004 Micromonas commoda HOM05D005909 ORTHO05D007481 2.4e-32 143.3 234 37.6
Carub.0005s0021 Capsella rubella HOM05D005909 ORTHO05D007481 1.7e-30 137.1 116 60.3
PRCOL_00006609 Prasinoderma coloniale HOM05D005909 ORTHO05D007481 5.0e-30 135.6 266 35.0
Cre06.g278116 Chlamydomonas reinhardtii HOM05D005909 ORTHO05D007481 7.3e-29 131.7 271 35.8
FAN17G2694 Fragaria x ananassa HOM05D005909 ORTHO05D007481 5.8e-26 122.1 86 72.1
arahy.Tifrunner.gnm1.ann1.XNS652 Arachis hypogaea HOM05D005909 ORTHO05D007481 8.3e-25 118.2 145 51.0
TAR622G0977 Trochodendron aralioides HOM05D005909 ORTHO05D007481 1.1e-24 117.9 83 68.7
SMO265G0018 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 1.9e-21 107.1 136 41.9
SMO163G0092 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 2.0e-18 97.1 140 40.7
BcaC06g31323 Brassica carinata HOM05D005909 ORTHO05D007481 3.7e-17 92.8 64 70.3
TPR.G28941 Trifolium pratense HOM05D000324 ORTHO05D004875 1.4e-16 90.9 103 52.4
CBR_g39317 Chara braunii HOM05D005909 ORTHO05D007481 1.2e-15 87.8 144 36.1
SEGI_32432 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 3.5e-15 86.3 69 59.4
SMO146G0235 Selaginella moellendorffii HOM05D020292 ORTHO05D030583 1.6e-12 77.4 110 39.1
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 4.6e-07 59.3 87 37.9


User provided reference genes

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