Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold14G06901 Striga asiatica HOM05D005909 ORTHO05D007481 1.5e-86 322.8 155 100.0
Hma1.2p1_2306F.1_g319360 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 2.8e-69 265.4 153 81.7
Hma1.2p1_1314F.1_g274990 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 1.1e-68 263.5 153 81.0
DCAR_007264 Daucus carota HOM05D005909 ORTHO05D007481 2.6e-67 258.8 148 81.1
Lj6A753G52 Lonicera japonica HOM05D005909 ORTHO05D007481 7.5e-67 257.3 148 82.4
Dinv16136 Davidia involucrata HOM05D005909 ORTHO05D007481 1.3e-66 256.5 145 83.4
TAR622G0977 Trochodendron aralioides HOM05D005909 ORTHO05D007481 1.7e-66 256.1 148 80.4
TAR622G1259 Trochodendron aralioides HOM05D005909 ORTHO05D007481 1.7e-66 256.1 148 80.4
Nn4g23953 Nelumbo nucifera HOM05D005909 ORTHO05D007481 2.9e-66 255.4 148 80.4
TPR.G4906 Trifolium pratense HOM05D005909 ORTHO05D007481 4.9e-66 254.6 153 77.8
Nitab4.5_0002112g0090 Nicotiana tabacum HOM05D005909 ORTHO05D007481 1.1e-65 253.4 155 76.8
CAN.G610.24 Capsicum annuum HOM05D005909 ORTHO05D007481 1.4e-65 253.1 155 76.8
SalBow8G0352 Salvia bowleyana HOM05D005909 ORTHO05D007481 1.4e-65 253.1 150 78.7
SalBow8G3248 Salvia bowleyana HOM05D005909 ORTHO05D007481 1.4e-65 253.1 150 78.7
RcHm_v2.0_Chr4g0434411 Rosa chinensis HOM05D005909 ORTHO05D007481 2.4e-65 252.3 147 81.6
Atru.chr11.237 Acer truncatum HOM05D005909 ORTHO05D007481 3.2e-65 251.9 148 80.4
CSS0033004 Camellia sinensis var. sinensis HOM05D005909 ORTHO05D007481 4.1e-65 251.5 148 78.4
Rhsim09G0103900 Rhododendron simsii HOM05D005909 ORTHO05D007481 4.1e-65 251.5 153 76.5
vmacro10599 Vaccinium macrocarpon HOM05D005909 ORTHO05D007481 4.1e-65 251.5 153 77.8
Glyma.20G120600 Glycine max HOM05D005909 ORTHO05D007481 5.4e-65 251.1 153 75.8
Solyc05g008870.3 Solanum lycopersicum HOM05D005909 ORTHO05D007481 5.4e-65 251.1 150 79.3
Sabra10G0090400 Salix brachista HOM05D005909 ORTHO05D007481 7.0e-65 250.8 148 79.1
Medtr1g109590 Medicago truncatula HOM05D005909 ORTHO05D007481 9.2e-65 250.4 152 77.0
Cc11_g09670 Coffea canephora HOM05D005909 ORTHO05D007481 1.2e-64 250.0 148 77.7
Sopen05g004630 Solanum pennellii HOM05D005909 ORTHO05D007481 1.2e-64 250.0 155 76.1
Phvul.007G032000 Phaseolus vulgaris HOM05D005909 ORTHO05D007481 1.6e-64 249.6 153 75.8
MSTRG.13555 Avicennia marina HOM05D005909 ORTHO05D007481 2.1e-64 249.2 155 74.8
Potri.010G120200 Populus trichocarpa HOM05D005909 ORTHO05D007481 2.1e-64 249.2 148 78.4
CiPaw.05G242600 Carya illinoinensis HOM05D005909 ORTHO05D007481 2.7e-64 248.8 150 78.0
ECA246G0525 Erigeron canadensis HOM05D005909 ORTHO05D007481 2.7e-64 248.8 148 77.0
Peaxi162Scf00179g00534 Petunia axillaris HOM05D005909 ORTHO05D007481 2.7e-64 248.8 147 78.9
Cfa015837 Carpinus fangiana HOM05D005909 ORTHO05D007481 3.5e-64 248.4 153 75.8
Lj5g0016761 Lotus japonicus HOM05D005909 ORTHO05D007481 3.5e-64 248.4 153 76.5
Eucgr.G02238 Eucalyptus grandis HOM05D005909 ORTHO05D007481 6.0e-64 247.7 147 78.2
QL01p010815 Quercus lobata HOM05D005909 ORTHO05D007481 7.8e-64 247.3 153 74.5
QL93p0145_0024 Quercus lobata HOM05D005909 ORTHO05D007481 7.8e-64 247.3 153 74.5
VMungo0720G1068 Vigna mungo HOM05D005909 ORTHO05D007481 7.8e-64 247.3 153 75.8
CANSAT01G0643 Cannabis sativa HOM05D005909 ORTHO05D007481 1.0e-63 246.9 147 76.9
Lalb_Chr21g0308731 Lupinus albus HOM05D005909 ORTHO05D007481 1.3e-63 246.5 153 74.5
arahy.Tifrunner.gnm1.ann1.W577BF Arachis hypogaea HOM05D005909 ORTHO05D007481 1.7e-63 246.1 153 73.9
COL.COLO4_32148 Corchorus olitorius HOM05D005909 ORTHO05D007481 1.7e-63 246.1 148 77.7
FAN12G0185 Fragaria x ananassa HOM05D005909 ORTHO05D007481 1.7e-63 246.1 142 82.4
FAN17G2694 Fragaria x ananassa HOM05D005909 ORTHO05D007481 1.7e-63 246.1 142 82.4
Psat6g224680 Pisum sativum HOM05D005909 ORTHO05D007481 1.7e-63 246.1 153 73.9
unitig_699.g19483 Utricularia gibba HOM05D005909 ORTHO05D007481 1.7e-63 246.1 153 73.2
Actinidia14921 Actinidia chinensis HOM05D005909 ORTHO05D007481 2.3e-63 245.7 148 78.4
BcaC06g34207 Brassica carinata HOM05D005909 ORTHO05D007481 2.3e-63 245.7 147 78.2
C07p31670 Brassica napus HOM05D005909 ORTHO05D007481 2.3e-63 245.7 147 78.2
BolC7t43706H Brassica oleracea HOM05D005909 ORTHO05D007481 2.3e-63 245.7 147 78.2
Manes.06G064900 Manihot esculenta HOM05D005909 ORTHO05D007481 2.3e-63 245.7 148 78.4
Nitab4.5_0000694g0120 Nicotiana tabacum HOM05D005909 ORTHO05D007481 3.0e-63 245.4 155 76.1
FAN07G1481 Fragaria x ananassa HOM05D005909 ORTHO05D007481 5.1e-63 244.6 142 81.7
PGR119G2457 Punica granatum HOM05D005909 ORTHO05D007481 5.1e-63 244.6 153 74.5
Ah.03g138370 Amaranthus hybridus HOM05D005909 ORTHO05D007481 8.6e-63 243.8 153 72.5
arahy.Tifrunner.gnm1.ann1.IU6D7D Arachis hypogaea HOM05D005909 ORTHO05D007481 8.6e-63 243.8 153 73.2
FAN12G0127 Fragaria x ananassa HOM05D005909 ORTHO05D007481 1.1e-62 243.4 142 81.7
Prupe.1G316800 Prunus persica HOM05D005909 ORTHO05D007481 1.1e-62 243.4 143 81.1
FvH4_4g26720 Fragaria vesca HOM05D005909 ORTHO05D007481 1.5e-62 243.0 142 81.7
Aqoxy3G04056 Aquilegia oxysepala HOM05D005909 ORTHO05D007481 1.9e-62 242.7 146 76.7
Aa31LG2G8670 Aethionema arabicum HOM05D005909 ORTHO05D007481 2.5e-62 242.3 147 75.5
HanXRQChr15g0477421 Helianthus annuus HOM05D005909 ORTHO05D007481 2.5e-62 242.3 151 76.8
Ca_06889_v3 Cicer arietinum L. HOM05D005909 ORTHO05D007481 3.3e-62 241.9 153 73.9
Gohir.A03G148900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 4.3e-62 241.5 148 75.0
Gorai.005G193400 Gossypium raimondii HOM05D005909 ORTHO05D007481 4.3e-62 241.5 148 75.0
TWI79G1572 Tripterygium wilfordii HOM05D005909 ORTHO05D007481 5.6e-62 241.1 146 77.4
A06p44550 Brassica napus HOM05D005909 ORTHO05D007481 1.2e-61 240.0 147 76.2
BraA06t27329Z Brassica rapa HOM05D005909 ORTHO05D007481 1.6e-61 239.6 146 75.3
Gohir.D02G171900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 1.6e-61 239.6 148 74.3
CARHR143760 Cardamine hirsuta HOM05D005909 ORTHO05D007481 2.1e-61 239.2 147 75.5
MBI16_g44832_MAGBIO Magnolia biondii HOM05D005909 ORTHO05D007481 2.1e-61 239.2 148 74.3
Migut.E00369 Erythranthe guttata HOM05D005909 ORTHO05D007481 2.8e-61 238.8 150 79.3
Sc14g0007280 Simmondsia chinensis HOM05D005909 ORTHO05D007481 4.7e-61 238.0 149 75.8
Ciclev10015519m.g Citrus clementina HOM05D005909 ORTHO05D007481 6.2e-61 237.7 147 76.2
Cpa.g.sc65.66 Carica papaya HOM05D005909 ORTHO05D007481 8.1e-61 237.3 153 74.5
PSO782G5715 Papaver somniferum HOM05D005909 ORTHO05D007481 8.1e-61 237.3 148 74.3
Thhalv10000909m.g Eutrema salsugineum HOM05D005909 ORTHO05D007481 1.8e-60 236.1 147 74.1
Sp2g12680 Schrenkiella parvula HOM05D005909 ORTHO05D007481 1.8e-60 236.1 149 75.2
EL10Ac6g14305 Beta vulgaris HOM05D005909 ORTHO05D007481 2.3e-60 235.7 148 69.6
FAN22G0620 Fragaria x ananassa HOM05D005909 ORTHO05D007481 2.3e-60 235.7 142 79.6
Hund20744 Selenicereus undatus HOM05D005909 ORTHO05D007481 2.3e-60 235.7 147 71.4
GSVIVG01011843001 Vitis vinifera HOM05D005909 ORTHO05D007481 2.3e-60 235.7 144 77.8
Carub.0005s0021 Capsella rubella HOM05D005909 ORTHO05D007481 4.0e-60 235.0 146 74.0
Sed0017467 Sechium edule HOM05D005909 ORTHO05D007481 4.0e-60 235.0 148 75.0
AUR62037268 Chenopodium quinoa HOM05D005909 ORTHO05D007481 5.2e-60 234.6 153 69.9
AL5G10170 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 6.8e-60 234.2 146 73.3
Duzib248G1493 Durio zibethinus HOM05D005909 ORTHO05D007481 8.9e-60 233.8 148 73.6
Lsat_1_v5_gn_3_62021 Lactuca sativa HOM05D005909 ORTHO05D007481 8.9e-60 233.8 143 76.2
AUR62002812 Chenopodium quinoa HOM05D005909 ORTHO05D007481 1.2e-59 233.4 153 69.9
AT2G01220 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 1.5e-59 233.0 147 73.5
MD16G1037200 Malus domestica HOM05D005909 ORTHO05D007481 1.5e-59 233.0 147 76.2
THA.LOC104823950 Tarenaya hassleriana HOM05D005909 ORTHO05D007481 2.0e-59 232.6 144 73.6
CDE08G1136 Ceratophyllum demersum HOM05D005909 ORTHO05D007481 2.6e-59 232.3 149 72.5
Haze_00654 Corylus avellana HOM05D005909 ORTHO05D007481 3.4e-59 231.9 189 61.9
ATR0807G244 Amborella trichopoda HOM05D005909 ORTHO05D007481 5.8e-59 231.1 149 72.5
HPP92_024514 Vanilla planifolia HOM05D005909 ORTHO05D007481 1.3e-58 229.9 145 74.5
Zm00001eb360650 Zea mays HOM05D005909 ORTHO05D007481 1.7e-58 229.6 148 70.9
CsaV3_5G028790 Cucumis sativus L. HOM05D005909 ORTHO05D007481 8.3e-58 227.3 148 71.6
MELO3C005340.2 Cucumis melo HOM05D005909 ORTHO05D007481 3.2e-57 225.3 148 71.6
AL5G17030 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 6.0e-56 221.1 147 69.4
CARHR148990 Cardamine hirsuta HOM05D005909 ORTHO05D007481 3.9e-55 218.4 147 66.7
Carub.0005s0605 Capsella rubella HOM05D005909 ORTHO05D007481 3.6e-53 211.8 141 68.8
AT3G27610 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 5.2e-52 208.0 142 67.6
AagrBONN_evm.TU.Sc2ySwM_362.1435 Anthoceros agrestis HOM05D004406 ORTHO05D005660 3.0e-47 192.2 145 60.0
Mapoly0100s0051 Marchantia polymorpha HOM05D005909 ORTHO05D007481 5.1e-47 191.4 150 56.7
PSO063G1187 Papaver somniferum HOM05D005909 ORTHO05D007481 8.7e-47 190.7 112 77.7
Pp3c3_16750 Physcomitrium patens HOM05D005909 ORTHO05D007481 9.9e-43 177.2 147 54.4
SMO196G0003 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 1.7e-42 176.4 153 50.3
Pp3c12_7340 Physcomitrium patens HOM05D005909 ORTHO05D007481 2.4e-41 172.6 144 54.2
Dinv31596 Davidia involucrata HOM05D005909 ORTHO05D007481 4.2e-41 171.8 148 58.8
ClCG01G005900 Citrullus lanatus HOM05D005909 ORTHO05D007481 1.0e-39 167.2 148 58.8
SEGI_29486 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 1.2e-35 153.7 107 66.4
Oeu027686.1 Olea europaea HOM05D005909 ORTHO05D007481 3.9e-31 138.7 73 91.8
Actinidia16683 Actinidia chinensis HOM05D005909 ORTHO05D007481 2.8e-29 132.5 84 76.2
Thecc.02G222000 Theobroma cacao HOM05D005909 ORTHO05D007481 1.8e-28 129.8 73 84.9
Cre06.g278116 Chlamydomonas reinhardtii HOM05D005909 ORTHO05D007481 3.9e-23 112.1 137 43.1
CiPaw.05G241800 Carya illinoinensis HOM05D005909 ORTHO05D007481 3.3e-22 109.0 65 75.4
PRCOL_00006609 Prasinoderma coloniale HOM05D005909 ORTHO05D007481 3.3e-22 109.0 141 44.0
MCO06G004 Micromonas commoda HOM05D005909 ORTHO05D007481 2.1e-21 106.3 153 37.3
CBR_g39316 Chara braunii HOM05D000019 ORTHO05D000002 1.1e-12 77.4 69 53.6
Gohir.D12G121400 Gossypium hirsutum HOM05D005909 ORTHO05D046826 9.0e-12 74.3 36 97.2
Gorai.008G132300 Gossypium raimondii HOM05D005909 ORTHO05D046826 1.1e-09 67.4 36 88.9
Os01g0691500 Oryza sativa ssp. japonica HOM05D005909 ORTHO05D007481 7.4e-06 54.7 36 61.1


User provided reference genes

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