Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold14G06855 Striga asiatica HOM05D007913 ORTHO05D009599 4.4e-48 194.5 113 100.0
Migut.E00331 Erythranthe guttata HOM05D007913 ORTHO05D009599 7.8e-13 77.4 120 46.7
Migut.E00332 Erythranthe guttata HOM05D007913 ORTHO05D009599 2.8e-10 68.9 112 46.4
MSTRG.13524 Avicennia marina HOM05D007913 ORTHO05D009599 5.2e-09 64.7 80 47.5
MSTRG.2240 Avicennia marina HOM05D007913 ORTHO05D009599 1.5e-08 63.2 109 41.3
Dinv04476 Davidia involucrata HOM05D007913 ORTHO05D009599 1.5e-08 63.2 105 42.9
MSTRG.13525 Avicennia marina HOM05D007913 ORTHO05D009599 2.0e-08 62.8 76 48.7
MSTRG.832 Avicennia marina HOM05D007913 ORTHO05D009599 4.4e-08 61.6 109 40.4
MSTRG.13523 Avicennia marina HOM05D007913 ORTHO05D009599 9.9e-08 60.5 119 40.3
vmacro16450 Vaccinium macrocarpon HOM05D010627 ORTHO05D009599 9.9e-08 60.5 105 45.7
CANSAT01G0283 Cannabis sativa HOM05D007913 ORTHO05D009599 1.3e-07 60.1 119 42.9
SalBow8G2445 Salvia bowleyana HOM05D007913 ORTHO05D009599 1.7e-07 59.7 100 47.0
Ciclev10033117m.g Citrus clementina HOM05D013794 ORTHO05D009599 2.2e-07 59.3 107 41.1
Thecc.02G356200 Theobroma cacao HOM05D007913 ORTHO05D009599 2.9e-07 58.9 106 44.3
COL.COLO4_07914 Corchorus olitorius HOM05D007913 ORTHO05D009599 8.3e-07 57.4 111 39.6
TAR371G0046 Trochodendron aralioides HOM05D007913 ORTHO05D009599 8.3e-07 57.4 71 52.1
QL01p043366 Quercus lobata HOM05D007913 ORTHO05D009599 1.1e-06 57.0 77 54.5
MSTRG.2241 Avicennia marina HOM05D007913 ORTHO05D009599 1.4e-06 56.6 111 39.6
Cfa000683 Carpinus fangiana HOM05D007913 ORTHO05D009599 1.4e-06 56.6 72 51.4
Thecc.02G356100 Theobroma cacao HOM05D013794 ORTHO05D009599 2.4e-06 55.8 102 37.3
Haze_06128 Corylus avellana HOM05D003281 ORTHO05D004128 3.2e-06 55.5 76 48.7
Duzib251G0161 Durio zibethinus HOM05D013794 ORTHO05D009599 4.1e-06 55.1 67 46.3
CiPaw.16G064400 Carya illinoinensis HOM05D007913 ORTHO05D009599 5.4e-06 54.7 122 36.1
Rhsim09G0108600 Rhododendron simsii HOM05D007913 ORTHO05D009599 5.4e-06 54.7 116 42.2
Hma1.2p1_0061F.1_g034050 Hydrangea macrophylla HOM05D007913 ORTHO05D009599 7.1e-06 54.3 112 39.3
TAR629G2111 Trochodendron aralioides HOM05D007913 ORTHO05D009599 7.1e-06 54.3 116 39.7


User provided reference genes

Program Settings