Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold14G06831 Striga asiatica HOM05D002039 ORTHO05D406452 3.9e-122 441.4 213 100.0
SGA_v2.0_scaffold14G06828 Striga asiatica HOM05D002039 ORTHO05D005834 8.0e-19 98.2 50 100.0
unitig_27.g25239 Utricularia gibba HOM05D002039 ORTHO05D005834 4.9e-16 89.0 63 76.2
FAN12G3459 Fragaria x ananassa HOM05D002039 ORTHO05D005834 4.3e-12 75.9 49 77.6
FAN17G0871 Fragaria x ananassa HOM05D002039 ORTHO05D005834 4.3e-12 75.9 49 77.6
FAN22G1156 Fragaria x ananassa HOM05D002039 ORTHO05D005834 4.3e-12 75.9 49 77.6
PSO782G1617 Papaver somniferum HOM05D002039 ORTHO05D005834 4.4e-09 65.9 48 72.9
Oeu022115.1 Olea europaea HOM05D002039 ORTHO05D005834 2.2e-08 63.5 44 72.7
Actinidia38389 Actinidia chinensis HOM05D002039 ORTHO05D005834 2.9e-08 63.2 44 70.5
unitig_26.g10269 Utricularia gibba HOM05D002039 ORTHO05D005834 2.9e-08 63.2 44 72.7
Dinv21129 Davidia involucrata HOM05D002039 ORTHO05D005834 4.9e-08 62.4 44 70.5
Migut.K01267 Erythranthe guttata HOM05D002039 ORTHO05D005834 4.9e-08 62.4 44 70.5
vmacro01367 Vaccinium macrocarpon HOM05D002039 ORTHO05D005834 6.4e-08 62.0 44 70.5
CSS0017460 Camellia sinensis var. sinensis HOM05D002039 ORTHO05D005834 8.3e-08 61.6 45 68.9
Oeu042032.1 Olea europaea HOM05D002039 ORTHO05D005834 1.1e-07 61.2 44 70.5
RhsimUnG0136800 Rhododendron simsii HOM05D002039 ORTHO05D005834 1.1e-07 61.2 44 70.5
Aqoxy3G03914 Aquilegia oxysepala HOM05D002039 ORTHO05D005834 1.4e-07 60.8 44 68.2
CAN.G184.93 Capsicum annuum HOM05D002039 ORTHO05D005834 1.4e-07 60.8 44 70.5
HanXRQChr16g0528921 Helianthus annuus HOM05D002039 ORTHO05D005834 1.4e-07 60.8 45 68.9
Nitab4.5_0006664g0020 Nicotiana tabacum HOM05D002039 ORTHO05D005834 1.4e-07 60.8 44 70.5
Solyc05g009800.4 Solanum lycopersicum HOM05D002039 ORTHO05D005834 1.4e-07 60.8 44 70.5
Sopen05g005630 Solanum pennellii HOM05D002039 ORTHO05D005834 1.4e-07 60.8 44 70.5
PGSC0003DMG400000810 Solanum tuberosum HOM05D002039 ORTHO05D005834 1.4e-07 60.8 44 70.5
Haze_17444 Corylus avellana HOM05D002039 ORTHO05D005834 1.9e-07 60.5 44 68.2
CsaV3_5G022990 Cucumis sativus L. HOM05D002039 ORTHO05D005834 1.9e-07 60.5 44 72.7
Dinv16505 Davidia involucrata HOM05D002039 ORTHO05D005834 1.9e-07 60.5 44 68.2
SalBow8G1407 Salvia bowleyana HOM05D002039 ORTHO05D005834 1.9e-07 60.5 44 68.2
ClCG03G009870 Citrullus lanatus HOM05D002039 ORTHO05D005834 2.4e-07 60.1 44 72.7
ECA234G2593 Erigeron canadensis HOM05D002039 ORTHO05D005834 2.4e-07 60.1 55 60.0
CiPaw.15G003800 Carya illinoinensis HOM05D002039 ORTHO05D005834 3.2e-07 59.7 44 65.9
Eucgr.G02346 Eucalyptus grandis HOM05D002039 ORTHO05D005834 3.2e-07 59.7 44 63.6
Hma1.2p1_0862F.1_g229910 Hydrangea macrophylla HOM05D002039 ORTHO05D005834 3.2e-07 59.7 44 68.2
Lsat_1_v5_gn_4_19700 Lactuca sativa HOM05D002039 ORTHO05D005834 3.2e-07 59.7 45 66.7
MD16G1047800 Malus domestica HOM05D002039 ORTHO05D005834 3.2e-07 59.7 45 64.4
Manes.06G071800 Manihot esculenta HOM05D002039 ORTHO05D005834 3.2e-07 59.7 44 65.9
MBI09_g36357_MAGBIO Magnolia biondii HOM05D002039 ORTHO05D005834 4.1e-07 59.3 55 60.0
Peaxi162Scf00380g00315 Petunia axillaris HOM05D002039 ORTHO05D005834 4.1e-07 59.3 44 68.2
SGA_v2.0_scaffold213G42220 Striga asiatica HOM05D002039 ORTHO05D005834 4.1e-07 59.3 44 68.2
VMungo0720G2076 Vigna mungo HOM05D002039 ORTHO05D005834 4.1e-07 59.3 44 68.2
Ah.03g137900 Amaranthus hybridus HOM05D002039 ORTHO05D005834 5.4e-07 58.9 64 50.0
Aqoxy3G00400 Aquilegia oxysepala HOM05D002039 ORTHO05D005834 5.4e-07 58.9 44 68.2
MSTRG.7685 Avicennia marina HOM05D002039 ORTHO05D005834 5.4e-07 58.9 39 74.4
CANSAT64G2292 Cannabis sativa HOM05D002039 ORTHO05D005834 5.4e-07 58.9 44 68.2
HanXRQChr17g0568041 Helianthus annuus HOM05D002039 ORTHO05D005834 5.4e-07 58.9 47 66.0
Manes.14G097900 Manihot esculenta HOM05D002039 ORTHO05D005834 5.4e-07 58.9 43 67.4
Phvul.003G027500 Phaseolus vulgaris HOM05D002039 ORTHO05D005834 5.4e-07 58.9 44 68.2
TWI31G0789 Tripterygium wilfordii HOM05D002039 ORTHO05D005834 5.4e-07 58.9 44 63.6
MD13G1046200 Malus domestica HOM05D002039 ORTHO05D005834 7.1e-07 58.5 45 62.2
Nitab4.5_0000672g0010 Nicotiana tabacum HOM05D002039 ORTHO05D005834 7.1e-07 58.5 44 68.2
TWI79G0857 Tripterygium wilfordii HOM05D002039 ORTHO05D005834 7.1e-07 58.5 74 50.0
AUR62002920 Chenopodium quinoa HOM05D002039 ORTHO05D005834 9.2e-07 58.2 44 63.6
Migut.L01095 Erythranthe guttata HOM05D002039 ORTHO05D005834 9.2e-07 58.2 43 69.8
Eucgr.B03053 Eucalyptus grandis HOM05D002039 ORTHO05D005834 9.2e-07 58.2 44 65.9
Lalb_Chr02g0151751 Lupinus albus HOM05D002039 ORTHO05D005834 9.2e-07 58.2 44 65.9
Nn3g17747 Nelumbo nucifera HOM05D002039 ORTHO05D005834 9.2e-07 58.2 39 74.4
CSS0033687 Camellia sinensis var. sinensis HOM05D002039 ORTHO05D005834 1.2e-06 57.8 44 68.2
PSO063G6415 Papaver somniferum HOM05D002039 ORTHO05D005834 1.2e-06 57.8 44 65.9
Sed0014528 Sechium edule HOM05D002039 ORTHO05D005834 1.2e-06 57.8 44 68.2
Actinidia14854 Actinidia chinensis HOM05D002039 ORTHO05D005834 1.6e-06 57.4 44 65.9
BcaC05g26651 Brassica carinata HOM05D002039 ORTHO05D005834 1.6e-06 57.4 44 65.9
Thhalv10007065m.g Eutrema salsugineum HOM05D002039 ORTHO05D005834 1.6e-06 57.4 44 65.9
Lj5g0010874 Lotus japonicus HOM05D002039 ORTHO05D005834 1.6e-06 57.4 44 68.2
Lalb_Chr17g0341891 Lupinus albus HOM05D002039 ORTHO05D005834 1.6e-06 57.4 44 65.9
Phvul.007G102400 Phaseolus vulgaris HOM05D002039 ORTHO05D005834 1.6e-06 57.4 44 65.9
Sp1g22640 Schrenkiella parvula HOM05D002039 ORTHO05D005834 1.6e-06 57.4 44 65.9
GSVIVG01011948001 Vitis vinifera HOM05D002039 ORTHO05D005834 1.6e-06 57.4 44 65.9
ATR0681G142 Amborella trichopoda HOM05D002039 ORTHO05D005834 2.1e-06 57.0 44 63.6
Ca_13606_v3 Cicer arietinum L. HOM05D002039 ORTHO05D005834 2.1e-06 57.0 44 63.6
Ciclev10030946m.g Citrus clementina HOM05D002039 ORTHO05D005834 2.1e-06 57.0 44 63.6
COL.COLO4_07870 Corchorus olitorius HOM05D002039 ORTHO05D005834 2.1e-06 57.0 44 61.4
Prupe.1G305700 Prunus persica HOM05D002039 ORTHO05D005834 2.1e-06 57.0 44 63.6
Hund05767 Selenicereus undatus HOM05D002039 ORTHO05D005834 2.1e-06 57.0 44 63.6
TAR622G0736 Trochodendron aralioides HOM05D002039 ORTHO05D005834 2.1e-06 57.0 44 65.9
Cc11_g10570 Coffea canephora HOM05D002039 ORTHO05D005834 2.7e-06 56.6 44 63.6
FvH4_4g28050 Fragaria vesca HOM05D002039 ORTHO05D005834 2.7e-06 56.6 45 64.4
Glyma.20G186100 Glycine max HOM05D002039 ORTHO05D005834 2.7e-06 56.6 44 65.9
BcaC05g26437 Brassica carinata HOM05D002039 ORTHO05D005834 3.5e-06 56.2 44 65.9
C05p24870 Brassica napus HOM05D002039 ORTHO05D005834 3.5e-06 56.2 44 65.9
BolC5t31216H Brassica oleracea HOM05D002039 ORTHO05D005834 3.5e-06 56.2 44 65.9
Medtr5g053610 Medicago truncatula HOM05D002039 ORTHO05D005834 3.5e-06 56.2 44 63.6
Psat2g090120 Pisum sativum HOM05D002039 ORTHO05D005834 3.5e-06 56.2 44 63.6
Thecc.02G360700 Theobroma cacao HOM05D002039 ORTHO05D005834 3.5e-06 56.2 44 63.6
VMungo1215G2911 Vigna mungo HOM05D002039 ORTHO05D005834 3.5e-06 56.2 44 65.9
AL1G39730 Arabidopsis lyrata HOM05D002039 ORTHO05D005834 4.6e-06 55.8 44 65.9
arahy.Tifrunner.gnm1.ann1.WS2Q93 Arachis hypogaea HOM05D002039 ORTHO05D005834 4.6e-06 55.8 44 63.6
AUR62035280 Chenopodium quinoa HOM05D002039 ORTHO05D005834 4.6e-06 55.8 44 61.4
RcHm_v2.0_Chr4g0435791 Rosa chinensis HOM05D002039 ORTHO05D005834 4.6e-06 55.8 45 64.4
TPR.G22406 Trifolium pratense HOM05D002039 ORTHO05D005834 4.6e-06 55.8 44 61.4
arahy.Tifrunner.gnm1.ann1.TGNB37 Arachis hypogaea HOM05D002039 ORTHO05D005834 6.0e-06 55.5 44 65.9
arahy.Tifrunner.gnm1.ann1.U9BY3Z Arachis hypogaea HOM05D002039 ORTHO05D005834 6.0e-06 55.5 44 65.9
DCAR_007225 Daucus carota HOM05D002039 ORTHO05D005834 6.0e-06 55.5 44 63.6
Lj2g0005913 Lotus japonicus HOM05D002039 ORTHO05D005834 6.0e-06 55.5 44 65.9
Aa31LG7G8930 Aethionema arabicum HOM05D002039 ORTHO05D005834 7.8e-06 55.1 44 61.4
arahy.Tifrunner.gnm1.ann1.ALUS4T Arachis hypogaea HOM05D002039 ORTHO05D005834 7.8e-06 55.1 44 63.6
Glyma.01G087700 Glycine max HOM05D002039 ORTHO05D005834 7.8e-06 55.1 44 65.9
Glyma.02G099800 Glycine max HOM05D002039 ORTHO05D005834 7.8e-06 55.1 44 65.9
SHI26259 Sapria himalayana HOM05D000105 ORTHO05D000023 7.8e-06 55.1 73 41.1
Hund25101 Selenicereus undatus HOM05D002039 ORTHO05D005834 7.8e-06 55.1 44 61.4
HPP92_021957 Vanilla planifolia HOM05D002039 ORTHO05D005834 7.8e-06 55.1 44 63.6


User provided reference genes

Program Settings