Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold149G36582 Striga asiatica HOM05D005065 ORTHO05D005944 2.0e-106 389.0 186 100.0
MSTRG.25443 Avicennia marina HOM05D005065 ORTHO05D005944 4.0e-38 162.2 192 53.6
MSTRG.1526 Avicennia marina HOM05D005065 ORTHO05D005944 3.1e-35 152.5 203 49.8
MSTRG.22454 Avicennia marina HOM05D005065 ORTHO05D005944 7.0e-35 151.4 188 47.3
SalBow7G0321 Salvia bowleyana HOM05D005065 ORTHO05D005944 1.8e-30 136.7 197 47.7
Dinv15081 Davidia involucrata HOM05D005065 ORTHO05D005944 1.5e-29 133.7 174 49.4
DCAR_011533 Daucus carota HOM05D005065 ORTHO05D005944 2.0e-29 133.3 154 53.9
Migut.C01259 Erythranthe guttata HOM05D005065 ORTHO05D005944 4.4e-29 132.1 187 47.1
Cfa013844 Carpinus fangiana HOM05D005065 ORTHO05D005944 3.5e-26 122.5 179 42.5
Dinv41716 Davidia involucrata HOM05D005065 ORTHO05D005944 3.5e-26 122.5 167 44.9
Oeu029996.1 Olea europaea HOM05D005065 ORTHO05D005944 4.5e-26 122.1 190 47.4
Haze_22517 Corylus avellana HOM05D005065 ORTHO05D005944 7.7e-26 121.3 191 41.9
Actinidia02576 Actinidia chinensis HOM05D005065 ORTHO05D005944 1.0e-25 120.9 150 50.7
Rhsim06G0094100 Rhododendron simsii HOM05D005065 ORTHO05D005944 1.0e-25 120.9 168 48.2
Cc00_g13630 Coffea canephora HOM05D005065 ORTHO05D005944 1.3e-25 120.6 208 42.3
Manes.18G101500 Manihot esculenta HOM05D005065 ORTHO05D005944 1.7e-25 120.2 159 45.3
Peaxi162Scf00268g00105 Petunia axillaris HOM05D005065 ORTHO05D005944 2.3e-25 119.8 196 43.9
Solyc06g065340.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 2.3e-25 119.8 199 42.7
Gohir.A13G121100 Gossypium hirsutum HOM05D005065 ORTHO05D005944 3.8e-25 119.0 163 47.9
Manes.02G192500 Manihot esculenta HOM05D005065 ORTHO05D005944 3.8e-25 119.0 167 44.9
Peaxi162Scf01013g00001 Petunia axillaris HOM05D005065 ORTHO05D005944 3.8e-25 119.0 194 42.8
CiPaw.07G160300 Carya illinoinensis HOM05D005065 ORTHO05D005944 8.6e-25 117.9 186 41.9
PGSC0003DMG400026113 Solanum tuberosum HOM05D005065 ORTHO05D005944 1.1e-24 117.5 213 40.4
CSS0016137 Camellia sinensis var. sinensis HOM05D005065 ORTHO05D005944 1.9e-24 116.7 173 45.1
Duzib177G1167 Durio zibethinus HOM05D005065 ORTHO05D005944 4.2e-24 115.5 157 49.7
Thecc.08G184600 Theobroma cacao HOM05D005065 ORTHO05D005944 7.2e-24 114.8 166 44.6
Glyma.10G217400 Glycine max HOM05D005065 ORTHO05D005944 1.2e-23 114.0 166 42.8
Actinidia23336 Actinidia chinensis HOM05D005065 ORTHO05D005944 1.6e-23 113.6 131 49.6
VMungo0720G1099 Vigna mungo HOM05D005065 ORTHO05D005944 1.6e-23 113.6 160 42.5
Potri.013G111700 Populus trichocarpa HOM05D005065 ORTHO05D005944 4.7e-23 112.1 167 44.9
Oeu017883.1 Olea europaea HOM05D005065 ORTHO05D005944 1.0e-22 110.9 184 40.8
Gohir.D13G125200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.8e-22 110.2 161 44.7
Gorai.013G140100 Gossypium raimondii HOM05D005065 ORTHO05D005944 1.8e-22 110.2 161 44.7
SGA_v2.0_scaffold24G10554 Striga asiatica HOM05D005065 ORTHO05D005944 2.3e-22 109.8 175 45.1
CAN.G199.8 Capsicum annuum HOM05D005065 ORTHO05D005944 3.0e-22 109.4 157 45.2
Phvul.007G088700 Phaseolus vulgaris HOM05D005065 ORTHO05D005944 3.0e-22 109.4 166 41.6
Rhsim11G0058500 Rhododendron simsii HOM05D005065 ORTHO05D005944 3.0e-22 109.4 184 41.8
Lalb_Chr21g0305721 Lupinus albus HOM05D005065 ORTHO05D005944 6.8e-22 108.2 163 41.7
SGA_v2.0_scaffold118G32491 Striga asiatica HOM05D005065 ORTHO05D005944 8.9e-22 107.8 164 43.3
Ca_10622_v3 Cicer arietinum L. HOM05D005065 ORTHO05D005944 1.2e-21 107.5 164 42.1
Sopen06g023830 Solanum pennellii HOM05D005065 ORTHO05D005944 2.0e-21 106.7 208 41.3
RcHm_v2.0_Chr6g0270871 Rosa chinensis HOM05D005065 ORTHO05D005944 2.6e-21 106.3 168 42.3
Hma1.2p1_0937F.1_g239030 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 3.4e-21 105.9 177 41.2
TWI60G1480 Tripterygium wilfordii HOM05D005065 ORTHO05D005944 5.7e-21 105.1 180 41.1
CiPaw.08G058800 Carya illinoinensis HOM05D005065 ORTHO05D005944 9.8e-21 104.4 182 39.6
Hma1.2p1_0060F.1_g032900 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 9.8e-21 104.4 194 40.7
QL02p033454 Quercus lobata HOM05D005065 ORTHO05D005944 2.2e-20 103.2 164 39.6
BcaB03g14918 Brassica carinata HOM05D005065 ORTHO05D005944 2.8e-20 102.8 180 42.8
Duzib211G0507 Durio zibethinus HOM05D005065 ORTHO05D005944 4.9e-20 102.1 157 42.7
Gorai.009G290400 Gossypium raimondii HOM05D005065 ORTHO05D005944 4.9e-20 102.1 160 41.2
PGR042G0986 Punica granatum HOM05D005065 ORTHO05D005944 4.9e-20 102.1 188 38.3
Gohir.A05G275300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 6.3e-20 101.7 152 42.8
Potri.019G082866 Populus trichocarpa HOM05D005065 ORTHO05D005944 8.3e-20 101.3 174 39.1
Lalb_Chr03g0036131 Lupinus albus HOM05D005065 ORTHO05D005944 1.1e-19 100.9 176 39.2
Eucgr.F02608 Eucalyptus grandis HOM05D005065 ORTHO05D005944 1.4e-19 100.5 143 42.0
Lalb_Chr06g0162001 Lupinus albus HOM05D005065 ORTHO05D005944 1.4e-19 100.5 160 39.4
Cpa.g.sc66.33 Carica papaya HOM05D005065 ORTHO05D005944 1.8e-19 100.1 191 37.2
Gohir.D05G277400 Gossypium hirsutum HOM05D005065 ORTHO05D005944 2.4e-19 99.8 154 41.6
Lalb_Chr01g0010191 Lupinus albus HOM05D005065 ORTHO05D005944 2.4e-19 99.8 179 36.9
Nn1g08370 Nelumbo nucifera HOM05D005065 ORTHO05D005944 5.4e-19 98.6 178 39.3
MD05G1042300 Malus domestica HOM05D005065 ORTHO05D005944 9.2e-19 97.8 180 37.2
Psat6g187880 Pisum sativum HOM05D005065 ORTHO05D005944 4.5e-18 95.5 188 36.7
Sabra13G0095100 Salix brachista HOM05D005065 ORTHO05D005944 4.5e-18 95.5 160 43.8
Sp5g27040 Schrenkiella parvula HOM05D005065 ORTHO05D005944 4.5e-18 95.5 153 39.9
TPR.G8826 Trifolium pratense HOM05D005065 ORTHO05D005944 4.5e-18 95.5 177 37.9
Prupe.8G058900 Prunus persica HOM05D005065 ORTHO05D005944 5.9e-18 95.1 163 38.7
Glyma.20G174600 Glycine max HOM05D005065 ORTHO05D005944 1.0e-17 94.4 124 44.4
Lj5g0001381 Lotus japonicus HOM05D005065 ORTHO05D005944 1.3e-17 94.0 176 36.9
Lsat_1_v5_gn_6_109661 Lactuca sativa HOM05D005065 ORTHO05D005944 1.7e-17 93.6 160 39.4
A02p17610 Brassica napus HOM05D005065 ORTHO05D005944 2.3e-17 93.2 147 38.1
BraA02t06807Z Brassica rapa HOM05D005065 ORTHO05D005944 2.3e-17 93.2 147 38.1
Lalb_Chr19g0129461 Lupinus albus HOM05D005065 ORTHO05D005944 2.3e-17 93.2 159 37.7
PGR102G0471 Punica granatum HOM05D005065 ORTHO05D005944 2.9e-17 92.8 171 38.6
PGSC0003DMG400014033 Solanum tuberosum HOM05D005065 ORTHO05D005944 2.9e-17 92.8 200 37.5
HanXRQChr04g0107491 Helianthus annuus HOM05D005065 ORTHO05D005944 3.9e-17 92.4 174 41.4
Nitab4.5_0000277g0040 Nicotiana tabacum HOM05D005065 ORTHO05D005944 5.0e-17 92.0 181 42.5
A07p30470 Brassica napus HOM05D005065 ORTHO05D005944 6.6e-17 91.7 164 39.0
BraA07t30683Z Brassica rapa HOM05D005065 ORTHO05D005944 6.6e-17 91.7 164 39.0
Nn5g27677 Nelumbo nucifera HOM05D005065 ORTHO05D005944 6.6e-17 91.7 125 44.0
THA.LOC104800116 Tarenaya hassleriana HOM05D005065 ORTHO05D005944 6.6e-17 91.7 202 36.1
C06p46070 Brassica napus HOM05D005065 ORTHO05D005944 8.6e-17 91.3 143 41.3
BraA07t31379Z Brassica rapa HOM05D005065 ORTHO05D005944 8.6e-17 91.3 183 39.9
Nitab4.5_0009211g0010 Nicotiana tabacum HOM05D005065 ORTHO05D005944 8.6e-17 91.3 140 45.0
Oeu021210.1 Olea europaea HOM05D005065 ORTHO05D005944 8.6e-17 91.3 155 42.6
BcaC08g46641 Brassica carinata HOM05D005065 ORTHO05D005944 1.9e-16 90.1 178 39.3
BolC6t39660H Brassica oleracea HOM05D005065 ORTHO05D005944 1.9e-16 90.1 178 39.3
Thhalv10019856m.g Eutrema salsugineum HOM05D005065 ORTHO05D005944 1.9e-16 90.1 147 40.1
Lsat_1_v5_gn_1_10621 Lactuca sativa HOM05D005065 ORTHO05D005944 1.9e-16 90.1 137 42.3
Lalb_Chr02g0141751 Lupinus albus HOM05D005065 ORTHO05D005944 1.9e-16 90.1 120 40.0
EL10Ac1g00090 Beta vulgaris HOM05D005065 ORTHO05D005944 2.5e-16 89.7 195 37.4
C06p35230 Brassica napus HOM05D005065 ORTHO05D005944 2.5e-16 89.7 171 36.8
THA.LOC104809741 Tarenaya hassleriana HOM05D005065 ORTHO05D005944 2.5e-16 89.7 197 36.0
Eucgr.F04121 Eucalyptus grandis HOM05D005065 ORTHO05D005944 4.3e-16 89.0 136 37.5
Sopen11g009740 Solanum pennellii HOM05D005065 ORTHO05D005944 4.3e-16 89.0 203 37.4
Ah.05g178140 Amaranthus hybridus HOM05D005065 ORTHO05D005944 5.6e-16 88.6 204 37.7
FAN15G3279 Fragaria x ananassa HOM05D005065 ORTHO05D005944 5.6e-16 88.6 183 35.0
Aqoxy5G02380 Aquilegia oxysepala HOM05D005065 ORTHO05D005944 7.3e-16 88.2 169 34.9
BolC6t38629H Brassica oleracea HOM05D005065 ORTHO05D005944 7.3e-16 88.2 168 33.9
Sabra19G0094300 Salix brachista HOM05D005065 ORTHO05D005944 7.3e-16 88.2 143 42.0
AL2G31580 Arabidopsis lyrata HOM05D005065 ORTHO05D005944 9.5e-16 87.8 152 38.8
AT1G71970 Arabidopsis thaliana HOM05D005065 ORTHO05D005944 9.5e-16 87.8 152 37.5
Solyc11g018710.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 1.6e-15 87.0 203 35.5
Atru.chr13.1737 Acer truncatum HOM05D005065 ORTHO05D005944 2.1e-15 86.7 152 39.5
BcaB05g24697 Brassica carinata HOM05D005065 ORTHO05D005944 2.1e-15 86.7 169 35.5
BcaB03g15639 Brassica carinata HOM05D005065 ORTHO05D005944 2.8e-15 86.3 175 37.7
BcaC03g15318 Brassica carinata HOM05D005065 ORTHO05D005944 3.6e-15 85.9 180 35.6
C02p29260 Brassica napus HOM05D005065 ORTHO05D005944 3.6e-15 85.9 180 35.6
BolC2t08977H Brassica oleracea HOM05D005065 ORTHO05D005944 3.6e-15 85.9 180 35.6
Gorai.006G130800 Gossypium raimondii HOM05D005065 ORTHO05D005944 4.7e-15 85.5 176 34.1
Carub.0002s1875 Capsella rubella HOM05D005065 ORTHO05D005944 6.1e-15 85.1 199 35.2
Ciclev10002433m.g Citrus clementina HOM05D005065 ORTHO05D005944 8.0e-15 84.7 190 36.3
HanXRQChr05g0150531 Helianthus annuus HOM05D005065 ORTHO05D005944 8.0e-15 84.7 147 40.1
Sc23g0001280 Simmondsia chinensis HOM05D005065 ORTHO05D005944 1.4e-14 84.0 141 38.3
AT1G22680 Arabidopsis thaliana HOM05D005065 ORTHO05D005944 2.3e-14 83.2 146 41.1
Oeu025521.1 Olea europaea HOM05D005065 ORTHO05D005944 2.3e-14 83.2 174 40.8
TAR624G0039 Trochodendron aralioides HOM05D005065 ORTHO05D005944 6.8e-14 81.6 167 35.9
CARHR064790 Cardamine hirsuta HOM05D005065 ORTHO05D005944 2.6e-13 79.7 192 35.4
AL1G36220 Arabidopsis lyrata HOM05D005065 ORTHO05D005944 4.4e-13 79.0 176 38.6
Carub.0001s2220 Capsella rubella HOM05D005065 ORTHO05D005944 4.4e-13 79.0 145 42.1
Aa31LG4G8650 Aethionema arabicum HOM05D005065 ORTHO05D005944 5.8e-13 78.6 186 35.5
CARHR023050 Cardamine hirsuta HOM05D005065 ORTHO05D005944 7.5e-13 78.2 149 38.3
ClCG11G008090 Citrullus lanatus HOM05D005065 ORTHO05D005944 7.5e-13 78.2 178 37.1
MELO3C008125.2 Cucumis melo HOM05D005065 ORTHO05D005944 1.3e-12 77.4 173 35.3
Gohir.D09G113300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 2.9e-12 76.3 173 32.4
Sed0021334 Sechium edule HOM05D005065 ORTHO05D005944 3.7e-12 75.9 167 37.1
Sp1g20190 Schrenkiella parvula HOM05D005065 ORTHO05D005944 4.9e-12 75.5 168 38.7
Gohir.A09G116200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.1e-11 74.3 164 33.5
CANSAT25G3119 Cannabis sativa HOM05D005065 ORTHO05D005944 7.0e-11 71.6 156 32.1
MBI09_g14012_MAGBIO Magnolia biondii HOM05D005065 ORTHO05D005944 1.6e-10 70.5 162 37.7
FAN24G2022 Fragaria x ananassa HOM05D005065 ORTHO05D005944 2.0e-10 70.1 147 35.4
HPP92_009270 Vanilla planifolia HOM05D005065 ORTHO05D005944 2.0e-10 70.1 166 35.5
FAN20G1873 Fragaria x ananassa HOM05D005065 ORTHO05D005944 7.8e-10 68.2 147 35.4
PSO782G1863 Papaver somniferum HOM05D005065 ORTHO05D005944 3.0e-09 66.2 180 37.2
Medtr1g096610 Medicago truncatula HOM05D005065 ORTHO05D005944 6.6e-09 65.1 190 28.9
Nitab4.5_0002483g0030 Nicotiana tabacum HOM05D005065 ORTHO05D005944 1.1e-08 64.3 122 42.6
Rhsim11G0058400 Rhododendron simsii HOM05D005065 ORTHO05D005944 1.9e-08 63.5 138 37.7
ATR0003G028 Amborella trichopoda HOM05D005065 ORTHO05D005944 3.3e-08 62.8 190 32.1
FvH4_2g11630 Fragaria vesca HOM05D005065 ORTHO05D005944 3.3e-08 62.8 115 38.3
A07p38140 Brassica napus HOM05D005065 ORTHO05D005944 5.6e-08 62.0 198 29.8
CDE06G2798 Ceratophyllum demersum HOM05D005065 ORTHO05D005944 1.2e-07 60.8 129 39.5
ATR0820G021 Amborella trichopoda HOM05D005065 ORTHO05D005944 1.8e-06 57.0 187 29.9
Aa31LG7G6580 Aethionema arabicum HOM05D005065 ORTHO05D005944 5.2e-06 55.5 105 41.9
HPP92_005697 Vanilla planifolia HOM05D005065 ORTHO05D005944 5.2e-06 55.5 141 36.2
HPP92_003138 Vanilla planifolia HOM05D005065 ORTHO05D005944 8.9e-06 54.7 130 30.8


User provided reference genes

Program Settings