Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold149G36579 Striga asiatica HOM05D005271 ORTHO05D006072 1.3e-49 199.5 106 100.0
Migut.N03355 Erythranthe guttata HOM05D005271 ORTHO05D006072 7.5e-42 173.7 106 83.0
MSTRG.22460 Avicennia marina HOM05D005271 ORTHO05D006072 3.8e-38 161.4 105 80.0
SalBow1G3231 Salvia bowleyana HOM05D005271 ORTHO05D006072 7.3e-37 157.1 107 79.4
SalBow6G1192 Salvia bowleyana HOM05D005271 ORTHO05D006072 1.6e-36 156.0 107 78.5
Oeu017888.1 Olea europaea HOM05D005271 ORTHO05D006072 3.4e-34 148.3 106 71.7
Cc10_g11580 Coffea canephora HOM05D005271 ORTHO05D006072 6.4e-33 144.1 107 71.0
unitig_0.g914 Utricularia gibba HOM05D000362 ORTHO05D000325 8.3e-33 143.7 106 68.9
SGA_v2.0_scaffold118G32500 Striga asiatica HOM05D005271 ORTHO05D006072 4.1e-32 141.4 106 69.8
Migut.C01265 Erythranthe guttata HOM05D005271 ORTHO05D006072 1.6e-31 139.4 107 71.0
PGR142G2670 Punica granatum HOM05D005271 ORTHO05D006072 2.0e-31 139.0 106 68.9
Cfa001130 Carpinus fangiana HOM05D005271 ORTHO05D006072 5.9e-31 137.5 106 65.1
Duzib151G0973 Durio zibethinus HOM05D005271 ORTHO05D006072 5.9e-31 137.5 104 67.3
Thecc.04G266100 Theobroma cacao HOM05D005271 ORTHO05D006072 7.8e-31 137.1 104 67.3
arahy.Tifrunner.gnm1.ann1.5IT82G Arachis hypogaea HOM05D005271 ORTHO05D006072 1.0e-30 136.7 104 67.3
arahy.Tifrunner.gnm1.ann1.0KQV7A Arachis hypogaea HOM05D005271 ORTHO05D006072 3.0e-30 135.2 105 63.8
arahy.Tifrunner.gnm1.ann1.31Z3CL Arachis hypogaea HOM05D005271 ORTHO05D006072 3.0e-30 135.2 105 63.8
Psat0s5346g0120 Pisum sativum HOM05D005271 ORTHO05D006072 3.0e-30 135.2 104 66.3
CiPaw.09G137400 Carya illinoinensis HOM05D005271 ORTHO05D006072 3.9e-30 134.8 105 64.8
Duzib212G0597 Durio zibethinus HOM05D005271 ORTHO05D006072 3.9e-30 134.8 104 63.5
Gohir.A09G226900 Gossypium hirsutum HOM05D005271 ORTHO05D006072 5.0e-30 134.4 103 66.0
Medtr6g017185 Medicago truncatula HOM05D005271 ORTHO05D006072 5.0e-30 134.4 105 66.7
arahy.Tifrunner.gnm1.ann1.VX2J7C Arachis hypogaea HOM05D005271 ORTHO05D006072 6.6e-30 134.0 105 62.9
CSS0040197 Camellia sinensis var. sinensis HOM05D005271 ORTHO05D006072 8.6e-30 133.7 105 66.7
Gohir.D09G227900 Gossypium hirsutum HOM05D005271 ORTHO05D006072 1.1e-29 133.3 103 65.0
Gorai.006G250600 Gossypium raimondii HOM05D005271 ORTHO05D006072 1.1e-29 133.3 103 65.0
FvH4_4g01060 Fragaria vesca HOM05D005271 ORTHO05D006072 1.5e-29 132.9 106 65.1
FAN12G2425 Fragaria x ananassa HOM05D005271 ORTHO05D006072 1.5e-29 132.9 106 65.1
Oeu021212.1 Olea europaea HOM05D005271 ORTHO05D006072 1.5e-29 132.9 106 67.0
FAN21G0135 Fragaria x ananassa HOM05D005271 ORTHO05D006072 1.9e-29 132.5 105 65.7
FvH4_3g12930 Fragaria vesca HOM05D005271 ORTHO05D006072 2.5e-29 132.1 105 65.7
FAN11G1405 Fragaria x ananassa HOM05D005271 ORTHO05D006072 2.5e-29 132.1 105 65.7
FAN16G1303 Fragaria x ananassa HOM05D005271 ORTHO05D006072 2.5e-29 132.1 106 64.2
QL11p012305 Quercus lobata HOM05D005271 ORTHO05D006072 2.5e-29 132.1 89 71.9
CAN.G350.33 Capsicum annuum HOM05D005271 ORTHO05D006072 4.3e-29 131.3 107 64.5
Ciclev10017270m.g Citrus clementina HOM05D005271 ORTHO05D006072 4.3e-29 131.3 105 64.8
Nitab4.5_0002741g0010 Nicotiana tabacum HOM05D005271 ORTHO05D006072 4.3e-29 131.3 107 65.4
Phvul.004G017800 Phaseolus vulgaris HOM05D005271 ORTHO05D006072 4.3e-29 131.3 104 64.4
VMungo0464G2009 Vigna mungo HOM05D005271 ORTHO05D006072 5.6e-29 131.0 104 64.4
Aqoxy1G00251 Aquilegia oxysepala HOM05D005271 ORTHO05D006072 9.5e-29 130.2 107 66.4
PSO782G3340 Papaver somniferum HOM05D005271 ORTHO05D006072 9.5e-29 130.2 109 64.2
TWI63G0865 Tripterygium wilfordii HOM05D005271 ORTHO05D006072 9.5e-29 130.2 89 68.5
Hma1.2p1_0088F.1_g045170 Hydrangea macrophylla HOM05D005271 ORTHO05D006072 1.2e-28 129.8 107 63.6
Nitab4.5_0004741g0030 Nicotiana tabacum HOM05D005271 ORTHO05D006072 1.2e-28 129.8 107 64.5
arahy.Tifrunner.gnm1.ann1.FU3306 Arachis hypogaea HOM05D005271 ORTHO05D006072 1.6e-28 129.4 104 65.4
FAN22G0530 Fragaria x ananassa HOM05D005271 ORTHO05D006072 1.6e-28 129.4 106 64.2
Lj2g0008924 Lotus japonicus HOM05D005271 ORTHO05D006072 1.6e-28 129.4 104 65.4
RcHm_v2.0_Chr5g0021041 Rosa chinensis HOM05D005271 ORTHO05D006072 1.6e-28 129.4 106 62.3
Actinidia22429 Actinidia chinensis HOM05D005271 ORTHO05D006072 2.1e-28 129.0 105 64.8
Potri.001G160500 Populus trichocarpa HOM05D005271 ORTHO05D006072 2.1e-28 129.0 106 60.4
Cpa.g.sc51.137 Carica papaya HOM05D005271 ORTHO05D006072 3.6e-28 128.3 98 65.3
Rhsim04G0167900 Rhododendron simsii HOM05D005271 ORTHO05D006072 3.6e-28 128.3 106 64.2
Atru.chr1.851 Acer truncatum HOM05D005271 ORTHO05D006072 4.7e-28 127.9 105 63.8
vmacro03554 Vaccinium macrocarpon HOM05D005271 ORTHO05D006072 4.7e-28 127.9 106 63.2
CANSAT25G1004 Cannabis sativa HOM05D005271 ORTHO05D006072 6.2e-28 127.5 89 69.7
SalBow7G2991 Salvia bowleyana HOM05D005271 ORTHO05D006072 6.2e-28 127.5 106 65.1
Dinv31186 Davidia involucrata HOM05D005271 ORTHO05D006072 8.0e-28 127.1 107 65.4
Glyma.19G010500 Glycine max HOM05D005271 ORTHO05D006072 8.0e-28 127.1 104 63.5
Ca_28197_v3 Cicer arietinum L. HOM05D005271 ORTHO05D006072 1.0e-27 126.7 105 62.9
PSO541G1812 Papaver somniferum HOM05D005271 ORTHO05D006072 1.0e-27 126.7 105 61.9
HanXRQChr14g0428301 Helianthus annuus HOM05D005271 ORTHO05D006072 1.8e-27 125.9 105 59.0
Gohir.A10G107101 Gossypium hirsutum HOM05D005271 ORTHO05D006072 2.3e-27 125.6 94 64.9
Manes.05G190800 Manihot esculenta HOM05D005271 ORTHO05D006072 4.0e-27 124.8 106 60.4
PSO675G0749 Papaver somniferum HOM05D005271 ORTHO05D006072 5.2e-27 124.4 105 60.0
Peaxi162Scf00004g02726 Petunia axillaris HOM05D005271 ORTHO05D006072 5.2e-27 124.4 125 58.4
Cc03_g07280 Coffea canephora HOM05D005271 ORTHO05D006072 6.8e-27 124.0 93 69.9
Nn7g38328 Nelumbo nucifera HOM05D005271 ORTHO05D006072 6.8e-27 124.0 107 63.6
Prupe.4G117300 Prunus persica HOM05D005271 ORTHO05D006072 6.8e-27 124.0 105 60.0
Sed0007631 Sechium edule HOM05D005271 ORTHO05D006072 6.8e-27 124.0 105 61.0
TWI15G1056 Tripterygium wilfordii HOM05D005271 ORTHO05D006072 6.8e-27 124.0 89 65.2
TAR629G0996 Trochodendron aralioides HOM05D005271 ORTHO05D006072 8.9e-27 123.6 107 62.6
ClCG01G025510 Citrullus lanatus HOM05D005271 ORTHO05D006072 1.5e-26 122.9 105 59.0
Lsat_1_v5_gn_2_4960 Lactuca sativa HOM05D005271 ORTHO05D006072 2.0e-26 122.5 102 60.8
Glyma.13G170400 Glycine max HOM05D005271 ORTHO05D006072 2.6e-26 122.1 105 62.9
DCAR_002456 Daucus carota HOM05D005271 ORTHO05D006072 4.4e-26 121.3 107 61.7
DCAR_002458 Daucus carota HOM05D005271 ORTHO05D006072 4.4e-26 121.3 107 61.7
TAR627G0156 Trochodendron aralioides HOM05D005271 ORTHO05D006072 5.8e-26 120.9 107 61.7
MELO3C007032.2 Cucumis melo HOM05D005271 ORTHO05D006072 9.8e-26 120.2 107 58.9
HanXRQChr06g0184021 Helianthus annuus HOM05D005271 ORTHO05D006072 9.8e-26 120.2 106 59.4
Sabra01G0131700 Salix brachista HOM05D005271 ORTHO05D006072 1.3e-25 119.8 119 53.8
Manes.01G042100 Manihot esculenta HOM05D005271 ORTHO05D006072 2.2e-25 119.0 106 57.5
AT1G05780 Arabidopsis thaliana HOM05D005271 ORTHO05D006072 2.9e-25 118.6 108 63.0
Carub.0004s1300 Capsella rubella HOM05D005271 ORTHO05D006072 2.9e-25 118.6 106 59.4
PSO170G3626 Papaver somniferum HOM05D005271 ORTHO05D006072 3.7e-25 118.2 84 69.0
CsaV3_6G052780 Cucumis sativus L. HOM05D005271 ORTHO05D006072 4.9e-25 117.9 107 57.9
Thhalv10017819m.g Eutrema salsugineum HOM05D005271 ORTHO05D006072 6.4e-25 117.5 108 62.0
Lalb_Chr02g0160001 Lupinus albus HOM05D005271 ORTHO05D006072 6.4e-25 117.5 105 60.0
Lalb_Chr02g0160211 Lupinus albus HOM05D005271 ORTHO05D006072 6.4e-25 117.5 105 60.0
AL1G15680 Arabidopsis lyrata HOM05D005271 ORTHO05D006072 8.3e-25 117.1 108 61.1
AT2G31710 Arabidopsis thaliana HOM05D005271 ORTHO05D006072 8.3e-25 117.1 106 59.4
BcaC01g05934 Brassica carinata HOM05D000364 ORTHO05D006072 8.3e-25 117.1 108 62.0
C03p20920 Brassica napus HOM05D000364 ORTHO05D006072 8.3e-25 117.1 108 62.0
CARHR125350 Cardamine hirsuta HOM05D005271 ORTHO05D006072 8.3e-25 117.1 102 60.8
AL4G26950 Arabidopsis lyrata HOM05D005271 ORTHO05D006072 1.1e-24 116.7 108 62.0
BcaB06g28531 Brassica carinata HOM05D005271 ORTHO05D006072 1.1e-24 116.7 106 58.5
C04p60870 Brassica napus HOM05D005271 ORTHO05D006072 1.1e-24 116.7 106 58.5
BolC4t27578H Brassica oleracea HOM05D005271 ORTHO05D006072 1.1e-24 116.7 106 58.5
BraA03t11049Z Brassica rapa HOM05D000364 ORTHO05D006072 1.1e-24 116.7 106 58.5
Sopen11g025310 Solanum pennellii HOM05D005271 ORTHO05D006072 1.1e-24 116.7 93 65.6
Ah.05g173390 Amaranthus hybridus HOM05D005271 ORTHO05D006072 1.4e-24 116.3 86 66.3
THA.LOC104800917 Tarenaya hassleriana HOM05D005271 ORTHO05D006072 1.4e-24 116.3 108 60.2
Rhsim12G0144200 Rhododendron simsii HOM05D005271 ORTHO05D006072 2.4e-24 115.5 127 52.8
GSVIVG01012142001 Vitis vinifera HOM05D005271 ORTHO05D006072 2.4e-24 115.5 93 66.7
A03p17850 Brassica napus HOM05D000364 ORTHO05D006072 3.2e-24 115.2 106 57.5
THA.LOC104815870 Tarenaya hassleriana HOM05D005271 ORTHO05D006072 4.1e-24 114.8 106 56.6
ECA238G4336 Erigeron canadensis HOM05D005271 ORTHO05D006072 5.4e-24 114.4 105 52.4
Aa31LG5G5280 Aethionema arabicum HOM05D005271 ORTHO05D006072 9.2e-24 113.6 106 56.6
BcaB01g04025 Brassica carinata HOM05D005271 ORTHO05D006072 1.2e-23 113.2 96 62.5
EL10Ac1g00803 Beta vulgaris HOM05D005271 ORTHO05D006072 1.6e-23 112.8 97 62.9
HPP92_012976 Vanilla planifolia HOM05D005271 ORTHO05D006072 1.6e-23 112.8 108 58.3
A04p24140 Brassica napus HOM05D005271 ORTHO05D006072 2.0e-23 112.5 106 55.7
BraA04t17934Z Brassica rapa HOM05D005271 ORTHO05D006072 2.7e-23 112.1 106 56.6
CDE05G1696 Ceratophyllum demersum HOM05D005271 ORTHO05D006072 3.5e-23 111.7 100 57.0
CARHR005290 Cardamine hirsuta HOM05D005271 ORTHO05D006072 1.0e-22 110.2 102 56.9
Sc10g0007720 Simmondsia chinensis HOM05D005271 ORTHO05D006072 1.3e-22 109.8 103 56.3
Ah.01g016950 Amaranthus hybridus HOM05D005271 ORTHO05D006072 3.9e-22 108.2 106 53.8
A05p13810 Brassica napus HOM05D005271 ORTHO05D006072 6.6e-22 107.5 103 56.3
CDE05G0701 Ceratophyllum demersum HOM05D005271 ORTHO05D006072 1.5e-21 106.3 101 55.4
C04p18180 Brassica napus HOM05D005271 ORTHO05D006072 3.3e-21 105.1 105 55.2
BolC4t23374H Brassica oleracea HOM05D005271 ORTHO05D006072 3.3e-21 105.1 105 55.2
BcaC02g11279 Brassica carinata HOM05D005271 ORTHO05D006072 5.6e-21 104.4 88 61.4
MD05G1247100 Malus domestica HOM05D005271 ORTHO05D006072 1.6e-20 102.8 92 57.6
MD10G1227700 Malus domestica HOM05D005271 ORTHO05D006072 2.1e-20 102.4 94 56.4
ATR1120G033 Amborella trichopoda HOM05D005271 ORTHO05D006072 3.6e-20 101.7 107 48.6
BcaB02g10411 Brassica carinata HOM05D000896 ORTHO05D006072 4.7e-20 101.3 105 53.3
AUR62023913 Chenopodium quinoa HOM05D005271 ORTHO05D006072 4.7e-20 101.3 86 57.0
Os04g0612900 Oryza sativa ssp. japonica HOM05D005271 ORTHO05D006072 3.1e-19 98.6 100 53.0
AUR62038333 Chenopodium quinoa HOM05D005271 ORTHO05D006072 4.0e-19 98.2 83 56.6
Zm00001eb071020 Zea mays HOM05D005271 ORTHO05D006072 1.2e-18 96.7 108 50.0
Eucgr.H02355 Eucalyptus grandis HOM05D005271 ORTHO05D006072 3.7e-17 91.7 74 67.6
Pp3c12_11530 Physcomitrium patens HOM05D005271 ORTHO05D006072 7.1e-16 87.4 96 49.0
COL.COLO4_15978 Corchorus olitorius HOM05D005271 ORTHO05D006072 2.7e-15 85.5 74 62.2
SMO300G0007 Selaginella moellendorffii HOM05D005271 ORTHO05D006072 2.7e-15 85.5 84 54.8
Haze_05264 Corylus avellana HOM05D005271 ORTHO05D006072 3.5e-15 85.1 74 62.2
CSS0024418 Camellia sinensis var. sinensis HOM05D005271 ORTHO05D006072 1.7e-14 82.8 73 63.0
Mapoly0098s0021 Marchantia polymorpha HOM05D005271 ORTHO05D006072 5.1e-14 81.3 102 47.1
Hund17073 Selenicereus undatus HOM05D005271 ORTHO05D006072 2.1e-12 75.9 65 64.6
MBI02_g01139_MAGBIO Magnolia biondii HOM05D005271 ORTHO05D006072 2.8e-12 75.5 74 58.1
PGSC0003DMG400010917 Solanum tuberosum HOM05D005271 ORTHO05D006072 4.7e-12 74.7 71 59.2
AUR62004132 Chenopodium quinoa HOM05D005271 ORTHO05D006072 1.1e-11 73.6 51 74.5
Hund00748 Selenicereus undatus HOM05D005271 ORTHO05D006072 4.0e-11 71.6 57 64.9
MBI14_g01725_MAGBIO Magnolia biondii HOM05D005271 ORTHO05D006072 2.6e-10 68.9 72 56.9
EL10Ac9g21107 Beta vulgaris HOM05D005271 ORTHO05D006072 5.8e-10 67.8 69 55.1
Zm00001eb430740 Zea mays HOM05D005271 ORTHO05D006072 2.4e-08 62.4 83 48.2
Aqoxy3G03156 Aquilegia oxysepala HOM05D005271 ORTHO05D006072 1.2e-07 60.1 70 54.3
CBR_g30301 Chara braunii HOM05D005271 ORTHO05D006072 2.7e-07 58.9 67 44.8
Solyc11g065610.1 Solanum lycopersicum HOM05D005271 ORTHO05D006072 3.0e-06 55.5 37 67.6


User provided reference genes

Program Settings