Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold149G36569 Striga asiatica HOM05D003880 ORTHO05D004959 0.0e+00 1126.7 561 100.0
Migut.N03362 Erythranthe guttata HOM05D003880 ORTHO05D004959 2.6e-226 788.9 579 70.8
Migut.O00683 Erythranthe guttata HOM05D003880 ORTHO05D004959 5.4e-224 781.2 579 70.3
Migut.C01288 Erythranthe guttata HOM05D003880 ORTHO05D004959 6.9e-219 764.2 588 69.2
SalBow6G4536 Salvia bowleyana HOM05D003880 ORTHO05D004959 2.1e-215 752.7 578 68.5
SalBow6G5395 Salvia bowleyana HOM05D003880 ORTHO05D004959 2.1e-215 752.7 577 68.6
SGA_v2.0_scaffold118G32535 Striga asiatica HOM05D003880 ORTHO05D004959 6.2e-212 741.1 590 67.6
MSTRG.1545 Avicennia marina HOM05D003880 ORTHO05D004959 4.5e-210 734.9 570 68.4
SGA_v2.0_scaffold24G10581 Striga asiatica HOM05D003880 ORTHO05D004959 1.1e-208 730.3 590 67.3
SalBow7G4466 Salvia bowleyana HOM05D003880 ORTHO05D004959 5.1e-206 721.5 571 66.7
unitig_747.g21476 Utricularia gibba HOM05D003880 ORTHO05D004959 1.2e-199 700.3 583 65.5
Sopen11g010860 Solanum pennellii HOM05D003880 ORTHO05D004959 3.5e-199 698.7 588 63.6
Oeu025391.1 Olea europaea HOM05D003880 ORTHO05D004959 1.0e-198 697.2 518 68.5
PGSC0003DMG400009278 Solanum tuberosum HOM05D003880 ORTHO05D004959 3.9e-198 695.3 587 64.1
Peaxi162Scf00391g00533 Petunia axillaris HOM05D003880 ORTHO05D004959 1.5e-197 693.3 496 70.6
Solyc11g020780.2 Solanum lycopersicum HOM05D003880 ORTHO05D004959 1.9e-197 693.0 588 62.9
Nitab4.5_0000167g0290 Nicotiana tabacum HOM05D003880 ORTHO05D004959 5.7e-197 691.4 601 63.1
Thecc.08G186500 Theobroma cacao HOM05D003880 ORTHO05D004959 4.1e-195 685.3 451 75.8
TAR628G0517 Trochodendron aralioides HOM05D003880 ORTHO05D004959 6.5e-193 677.9 599 62.6
Gohir.D09G112200 Gossypium hirsutum HOM05D003880 ORTHO05D004959 1.4e-192 676.8 435 75.9
Cc00_g06530 Coffea canephora HOM05D003880 ORTHO05D004959 3.2e-192 675.6 497 68.6
Prupe.1G551200 Prunus persica HOM05D003880 ORTHO05D004959 4.2e-192 675.2 593 62.2
GSVIVG01012776001 Vitis vinifera HOM05D003880 ORTHO05D004959 7.2e-192 674.5 505 68.3
Dinv02585 Davidia involucrata HOM05D003880 ORTHO05D004959 1.6e-191 673.3 619 59.8
Gorai.006G130000 Gossypium raimondii HOM05D003880 ORTHO05D004959 2.7e-191 672.5 574 63.1
TWI59G0907 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 1.0e-190 670.6 586 61.9
Duzib177G0936 Durio zibethinus HOM05D003880 ORTHO05D004959 2.3e-190 669.5 566 62.5
Sc23g0001360 Simmondsia chinensis HOM05D003880 ORTHO05D004959 3.0e-190 669.1 571 63.0
Actinidia23014 Actinidia chinensis HOM05D003880 ORTHO05D004959 3.9e-190 668.7 608 61.3
ClCG08G000380 Citrullus lanatus HOM05D003880 ORTHO05D004959 3.9e-190 668.7 457 72.4
TWI14G0176 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 6.7e-190 667.9 587 62.0
Cfa008134 Carpinus fangiana HOM05D003880 ORTHO05D004959 8.7e-190 667.5 487 70.2
Hma1.2p1_0004F.1_g004030 Hydrangea macrophylla HOM05D003880 ORTHO05D004959 1.1e-189 667.2 410 78.3
PSO063G4997 Papaver somniferum HOM05D003880 ORTHO05D004959 1.9e-189 666.4 589 62.8
Nn5g27605 Nelumbo nucifera HOM05D003880 ORTHO05D004959 2.5e-189 666.0 606 60.6
Cpa.g.sc66.21 Carica papaya HOM05D003880 ORTHO05D004959 3.3e-189 665.6 606 61.4
CAN.G259.4 Capsicum annuum HOM05D003880 ORTHO05D004959 4.3e-189 665.2 590 62.7
COL.COLO4_12797 Corchorus olitorius HOM05D003880 ORTHO05D004959 7.4e-189 664.5 442 74.0
Lalb_Chr09g0332911 Lupinus albus HOM05D003880 ORTHO05D004959 9.7e-189 664.1 476 70.2
PSO017G2071 Papaver somniferum HOM05D003880 ORTHO05D004959 9.7e-189 664.1 587 61.3
CiPaw.03G019400 Carya illinoinensis HOM05D003880 ORTHO05D004959 1.3e-188 663.7 483 70.4
Lj3g0009516 Lotus japonicus HOM05D003880 ORTHO05D004959 1.3e-188 663.7 423 76.6
arahy.Tifrunner.gnm1.ann1.9B0XDD Arachis hypogaea HOM05D003880 ORTHO05D004959 1.6e-188 663.3 469 70.6
Atru.chr13.2392 Acer truncatum HOM05D003880 ORTHO05D004959 2.2e-188 662.9 573 64.7
VMungo1080G1836 Vigna mungo HOM05D003880 ORTHO05D004959 2.2e-188 662.9 576 62.8
MD10G1100400 Malus domestica HOM05D003880 ORTHO05D004959 2.8e-188 662.5 596 60.6
Lj7A289G27 Lonicera japonica HOM05D003880 ORTHO05D004959 3.7e-188 662.1 433 75.8
arahy.Tifrunner.gnm1.ann1.HC95SM Arachis hypogaea HOM05D003880 ORTHO05D004959 3.1e-187 659.1 452 72.6
QL09p004950 Quercus lobata HOM05D003880 ORTHO05D004959 4.1e-187 658.7 413 78.5
MELO3C022212.2 Cucumis melo HOM05D003880 ORTHO05D004959 6.9e-187 657.9 606 60.2
DCAR_001082 Daucus carota HOM05D003880 ORTHO05D004959 1.5e-186 656.8 435 74.5
Duzib116G0170 Durio zibethinus HOM05D003880 ORTHO05D004959 1.5e-186 656.8 432 75.2
Lj4A481T13 Lonicera japonica HOM05D003880 ORTHO05D004959 1.5e-186 656.8 499 68.1
Phvul.005G000500 Phaseolus vulgaris HOM05D003880 ORTHO05D004959 2.0e-186 656.4 580 61.2
MBI17_g21473_MAGBIO Magnolia biondii HOM05D003880 ORTHO05D004959 2.6e-186 656.0 596 59.2
Lsat_1_v5_gn_1_10140 Lactuca sativa HOM05D003880 ORTHO05D004959 7.7e-186 654.4 618 59.2
CiPaw.04G012900 Carya illinoinensis HOM05D003880 ORTHO05D004959 1.3e-185 653.7 418 77.0
PGR042G0805 Punica granatum HOM05D003880 ORTHO05D004959 2.9e-185 652.5 599 61.4
HanXRQChr09g0260531 Helianthus annuus HOM05D003880 ORTHO05D004959 5.0e-185 651.7 480 69.4
MD05G1093300 Malus domestica HOM05D003880 ORTHO05D004959 5.0e-185 651.7 448 72.5
vmacro12476 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 1.4e-184 650.2 543 63.0
Eucgr.F02584 Eucalyptus grandis HOM05D003880 ORTHO05D004959 1.9e-184 649.8 591 59.9
Rhsim06G0088000 Rhododendron simsii HOM05D003880 ORTHO05D004959 1.9e-184 649.8 480 68.8
CsaV3_5G040400 Cucumis sativus L. HOM05D003880 ORTHO05D004959 2.5e-184 649.4 603 59.7
Ca_13965_v3 Cicer arietinum L. HOM05D003880 ORTHO05D004959 4.2e-184 648.7 407 77.6
Glyma.04G256800 Glycine max HOM05D003880 ORTHO05D004959 5.5e-184 648.3 560 62.3
Ciclev10000797m.g Citrus clementina HOM05D003880 ORTHO05D004959 7.2e-184 647.9 468 69.7
Actinidia02567 Actinidia chinensis HOM05D003880 ORTHO05D004959 2.1e-183 646.4 603 59.2
Aqoxy4G01178 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 2.1e-183 646.4 525 64.2
Lalb_Chr05g0224761 Lupinus albus HOM05D003880 ORTHO05D004959 2.1e-183 646.4 408 77.2
Medtr3g005360 Medicago truncatula HOM05D003880 ORTHO05D004959 4.6e-183 645.2 409 77.3
Lsat_1_v5_gn_4_136101 Lactuca sativa HOM05D003880 ORTHO05D004959 1.0e-182 644.0 496 67.3
unitig_0.g2129 Utricularia gibba HOM05D003880 ORTHO05D004959 1.0e-182 644.0 521 67.6
Psat1g000520 Pisum sativum HOM05D003880 ORTHO05D004959 1.4e-182 643.7 423 75.2
Hund16787 Selenicereus undatus HOM05D003880 ORTHO05D004959 1.8e-182 643.3 603 60.5
CANSAT11G2580 Cannabis sativa HOM05D003880 ORTHO05D004959 3.9e-182 642.1 592 60.6
AUR62023520 Chenopodium quinoa HOM05D003880 ORTHO05D004959 3.9e-182 642.1 516 65.5
Manes.02G194600 Manihot esculenta HOM05D003880 ORTHO05D004959 8.8e-182 641.0 604 57.3
FAN18G3221 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.1e-181 640.6 617 57.7
Os01g0874100 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 1.5e-181 640.2 465 69.7
TPR.G25498 Trifolium pratense HOM05D003880 ORTHO05D004959 3.3e-181 639.0 408 77.0
Potri.019G081600 Populus trichocarpa HOM05D003880 ORTHO05D004959 7.4e-181 637.9 592 59.0
Aa31LG4G10790 Aethionema arabicum HOM05D003880 ORTHO05D004959 9.7e-181 637.5 562 61.4
Dinv41735 Davidia involucrata HOM05D003880 ORTHO05D004959 1.3e-180 637.1 557 62.5
FAN04G0842 Fragaria x ananassa HOM05D003880 ORTHO05D004959 2.8e-180 636.0 451 70.1
Glyma.06G324700 Glycine max HOM05D003880 ORTHO05D004959 3.7e-180 635.6 568 61.1
AUR62004625 Chenopodium quinoa HOM05D003880 ORTHO05D004959 4.8e-180 635.2 613 58.9
Aqoxy7G03411 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 1.4e-179 633.6 416 75.0
FvH4_5g32350 Fragaria vesca HOM05D003880 ORTHO05D004959 1.8e-179 633.3 600 58.3
Sabra19G0093200 Salix brachista HOM05D003880 ORTHO05D004959 1.8e-179 633.3 595 59.0
FAN08G3431 Fragaria x ananassa HOM05D003880 ORTHO05D004959 3.1e-179 632.5 599 58.1
Os05g0430200 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 4.1e-179 632.1 404 76.5
Potri.013G109400 Populus trichocarpa HOM05D003880 ORTHO05D004959 5.3e-179 631.7 592 59.1
FAN13G2674 Fragaria x ananassa HOM05D003880 ORTHO05D004959 6.9e-179 631.3 603 57.9
Zm00001eb146250 Zea mays HOM05D003880 ORTHO05D004959 6.9e-179 631.3 481 65.9
CDE04G1048 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 1.2e-178 630.6 491 66.2
Zm00001eb348750 Zea mays HOM05D003880 ORTHO05D004959 2.0e-178 629.8 442 71.9
Manes.18G103500 Manihot esculenta HOM05D003880 ORTHO05D004959 5.9e-178 628.2 593 57.8
THA.LOC104800120 Tarenaya hassleriana HOM05D003880 ORTHO05D004959 5.9e-178 628.2 421 74.6
Carub.0001s2216 Capsella rubella HOM05D003880 ORTHO05D004959 1.3e-177 627.1 439 71.5
Gohir.A09G115400 Gossypium hirsutum HOM05D003880 ORTHO05D004959 5.0e-177 625.2 572 60.8
Sabra13G0094300 Salix brachista HOM05D003880 ORTHO05D004959 6.5e-177 624.8 496 64.9
Aa31LG7G6540 Aethionema arabicum HOM05D003880 ORTHO05D004959 1.4e-176 623.6 565 60.4
ATR0661G349 Amborella trichopoda HOM05D003880 ORTHO05D004959 1.9e-176 623.2 441 71.0
RcHm_v2.0_Chr7g0228851 Rosa chinensis HOM05D003880 ORTHO05D004959 1.9e-176 623.2 596 58.7
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 7.2e-176 621.3 457 69.1
vmacro00757 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 7.2e-176 621.3 588 58.8
CDE04G1100 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 9.4e-176 620.9 491 64.6
Actinidia05639 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.2e-175 620.5 454 69.8
CARHR064840 Cardamine hirsuta HOM05D003880 ORTHO05D004959 1.0e-174 617.5 595 58.7
BcaB05g24701 Brassica carinata HOM05D003880 ORTHO05D004959 3.0e-174 615.9 497 65.0
HanXRQChr11g0326071 Helianthus annuus HOM05D003880 ORTHO05D004959 1.5e-173 613.6 402 75.6
Oeu004740.1 Olea europaea HOM05D003880 ORTHO05D004959 1.5e-173 613.6 457 69.6
Thhalv10018309m.g Eutrema salsugineum HOM05D003880 ORTHO05D004959 2.6e-173 612.8 583 60.4
EL10Ac1g00108 Beta vulgaris HOM05D003880 ORTHO05D004959 4.4e-173 612.1 413 73.4
BcaB03g14926 Brassica carinata HOM05D003880 ORTHO05D004959 9.7e-173 610.9 598 57.7
Carub.0002s1882 Capsella rubella HOM05D003880 ORTHO05D004959 2.2e-172 609.8 516 63.0
AL2G31670 Arabidopsis lyrata HOM05D003880 ORTHO05D004959 3.7e-172 609.0 526 62.2
Sp5g27110 Schrenkiella parvula HOM05D003880 ORTHO05D004959 6.3e-172 608.2 567 60.1
C06p46140 Brassica napus HOM05D003880 ORTHO05D004959 1.1e-171 607.4 572 57.9
DCAR_011525 Daucus carota HOM05D003880 ORTHO05D004959 1.1e-171 607.4 521 61.6
BraA07t31387Z Brassica rapa HOM05D003880 ORTHO05D004959 3.1e-171 605.9 585 58.5
A02p17640 Brassica napus HOM05D003880 ORTHO05D004959 5.3e-171 605.1 452 68.8
BcaC08g46654 Brassica carinata HOM05D003880 ORTHO05D004959 7.0e-171 604.7 580 58.1
BraA02t06810Z Brassica rapa HOM05D003880 ORTHO05D004959 2.0e-170 603.2 452 68.6
A07p38210 Brassica napus HOM05D003880 ORTHO05D004959 2.6e-170 602.8 585 58.1
BolC6t39667H Brassica oleracea HOM05D003880 ORTHO05D004959 2.6e-170 602.8 580 57.9
BcaC03g15327 Brassica carinata HOM05D003880 ORTHO05D004959 3.5e-170 602.4 421 72.2
C02p29320 Brassica napus HOM05D003880 ORTHO05D004959 3.5e-170 602.4 421 72.2
BolC2t08983H Brassica oleracea HOM05D003880 ORTHO05D004959 3.5e-170 602.4 421 72.2
AT1G72040 Arabidopsis thaliana HOM05D003880 ORTHO05D004959 5.0e-169 598.6 591 57.4
Ah.05g178350 Amaranthus hybridus HOM05D003880 ORTHO05D004959 2.7e-167 592.8 585 57.4
Sed0018926 Sechium edule HOM05D003880 ORTHO05D004959 1.4e-166 590.5 369 78.0
Actinidia03514 Actinidia chinensis HOM05D003880 ORTHO05D004959 4.4e-157 558.9 362 76.0
CDE04G1975 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 2.4e-155 553.1 362 72.9
Nitab4.5_0003010g0030 Nicotiana tabacum HOM05D003880 ORTHO05D004959 4.5e-154 548.9 573 55.5
SHI35657 Sapria himalayana HOM05D003880 ORTHO05D004959 3.6e-143 512.7 390 65.4
Pp3c12_15090 Physcomitrium patens HOM05D003880 ORTHO05D004959 8.0e-143 511.5 459 59.5
SEGI_26933 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 1.8e-139 500.4 314 74.8
Mapoly0028s0143 Marchantia polymorpha HOM05D003880 ORTHO05D004959 9.5e-136 488.0 437 59.0
TAR624G0155 Trochodendron aralioides HOM05D003880 ORTHO05D004959 9.5e-128 461.5 375 63.7
SMO228G0044 Selaginella moellendorffii HOM05D003880 ORTHO05D004959 2.1e-127 460.3 361 63.2
SEGI_09673 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 1.2e-125 454.5 284 74.3
BraA02t08014Z Brassica rapa HOM05D003880 ORTHO05D004959 3.3e-96 356.7 209 78.5
PRCOL_00007080 Prasinoderma coloniale HOM05D003880 ORTHO05D004959 3.7e-95 353.2 401 49.4
A02p29920 Brassica napus HOM05D003880 ORTHO05D004959 3.5e-90 336.7 197 78.7
FAN04G1012 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.8e-81 307.8 236 68.2
BcaNung01810 Brassica carinata HOM05D003880 ORTHO05D004959 4.3e-80 303.1 180 77.2
CSS0041582 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 2.5e-72 277.3 159 79.2
CSS0012164 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 2.2e-71 274.2 156 80.1
CSS0024003 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 2.2e-71 274.2 156 80.1
HPP92_019380 Vanilla planifolia HOM05D003880 ORTHO05D004959 1.1e-70 271.9 453 40.0
AagrBONN_evm.TU.Sc2ySwM_344.3442 Anthoceros agrestis HOM05D003880 ORTHO05D004959 2.9e-68 263.8 224 60.3
MCO01G353 Micromonas commoda HOM05D003880 ORTHO05D004959 5.9e-61 239.6 356 38.8
HPP92_027627 Vanilla planifolia HOM05D003880 ORTHO05D004959 3.6e-58 230.3 205 62.4
Cre02.g095350 Chlamydomonas reinhardtii HOM05D003880 ORTHO05D004959 3.3e-56 223.8 328 39.9
Pp3c15_5240 Physcomitrium patens HOM05D003880 ORTHO05D004959 1.7e-47 194.9 280 39.3
HPP92_019377 Vanilla planifolia HOM05D003880 ORTHO05D004959 2.8e-47 194.1 154 70.8
BolC8t50393H Brassica oleracea HOM05D003880 ORTHO05D004959 8.3e-39 166.0 188 50.0
BolC5t31452H Brassica oleracea HOM05D003880 ORTHO05D004959 4.1e-38 163.7 109 70.6
Pp3c4_20480 Physcomitrium patens HOM05D003880 ORTHO05D004959 2.8e-34 151.0 110 66.4
Mapoly0080s0005 Marchantia polymorpha HOM05D003880 ORTHO05D004959 2.6e-32 144.4 226 35.4
Oeu021226.1 Olea europaea HOM05D003880 ORTHO05D019999 1.1e-30 139.0 99 66.7
Actinidia18360 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.8e-30 138.3 88 70.5
BcaB08g34411 Brassica carinata HOM05D003880 ORTHO05D004959 1.8e-30 138.3 143 51.7
C08p27770 Brassica napus HOM05D003880 ORTHO05D004959 1.0e-28 132.5 83 72.3
BcaC07g39615 Brassica carinata HOM05D003880 ORTHO05D004959 8.6e-28 129.4 83 69.9
BcaB05g25101 Brassica carinata HOM05D003880 ORTHO05D019999 3.3e-27 127.5 129 52.7
Oeu004742.1 Olea europaea HOM05D003880 ORTHO05D004959 4.0e-25 120.6 220 42.3
HPP92_027628 Vanilla planifolia HOM05D003880 ORTHO05D019999 6.6e-20 103.2 120 47.5
BcaB07g33153 Brassica carinata HOM05D003880 ORTHO05D019999 1.2e-16 92.4 97 53.6
PRCOL_00005076 Prasinoderma coloniale HOM05D003880 ORTHO05D333288 1.2e-13 82.4 173 32.9
BcaB02g09679 Brassica carinata HOM05D003880 ORTHO05D019999 1.6e-13 82.0 91 51.6
CAN.G308.60 Capsicum annuum HOM05D003880 ORTHO05D000314 1.0e-12 79.3 111 41.4
Lsat_1_v5_gn_1_10160 Lactuca sativa HOM05D003880 ORTHO05D019999 7.3e-11 73.2 46 73.9
COL.COLO4_03399 Corchorus olitorius HOM05D003880 ORTHO05D019999 1.9e-06 58.5 31 80.6


User provided reference genes

Program Settings