Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold149G36556 Striga asiatica HOM05D000670 ORTHO05D000529 1.0e-111 406.8 206 100.0
SGA_v2.0_scaffold121G33101 Striga asiatica HOM05D000670 ORTHO05D000529 6.5e-50 201.4 198 62.1
MSTRG.23639 Avicennia marina HOM05D000670 ORTHO05D000529 1.4e-23 114.0 186 46.2
MSTRG.3498 Avicennia marina HOM05D000670 ORTHO05D000529 5.0e-18 95.5 189 37.6
Hma1.2p1_0723F.1_g208810 Hydrangea macrophylla HOM05D000670 ORTHO05D000529 1.9e-17 93.6 201 36.3
Dinv36999 Davidia involucrata HOM05D000670 ORTHO05D000529 3.6e-16 89.4 192 37.0
Lj4A173G11 Lonicera japonica HOM05D000670 ORTHO05D000529 3.6e-16 89.4 204 35.8
Oeu059807.2 Olea europaea HOM05D000670 ORTHO05D000529 6.2e-16 88.6 185 40.0
Oeu050396.1 Olea europaea HOM05D000670 ORTHO05D000529 1.8e-15 87.0 186 40.9
Cc02_g34020 Coffea canephora HOM05D000670 ORTHO05D000529 2.3e-15 86.7 205 35.6
MSTRG.3499 Avicennia marina HOM05D000670 ORTHO05D000529 3.1e-15 86.3 186 36.0
Dinv26987 Davidia involucrata HOM05D000670 ORTHO05D000529 6.8e-15 85.1 193 36.3
Rhsim08G0088800 Rhododendron simsii HOM05D000670 ORTHO05D000529 1.2e-14 84.3 212 35.4
Oeu059809.2 Olea europaea HOM05D000670 ORTHO05D000529 1.5e-14 84.0 125 44.0
MSTRG.3497 Avicennia marina HOM05D000670 ORTHO05D000529 7.5e-14 81.6 200 34.0
Oeu045651.2 Olea europaea HOM05D000670 ORTHO05D000529 2.9e-13 79.7 183 33.3
SGA_v2.0_scaffold149G36545 Striga asiatica HOM05D000670 ORTHO05D000529 4.9e-13 79.0 189 33.9
MSTRG.23634 Avicennia marina HOM05D000670 ORTHO05D000529 6.4e-13 78.6 188 33.0
Cc02_g34090 Coffea canephora HOM05D000670 ORTHO05D000529 8.3e-13 78.2 202 35.1
vmacro05437 Vaccinium macrocarpon HOM05D000670 ORTHO05D000529 4.1e-12 75.9 208 34.6
Lj4A172T20 Lonicera japonica HOM05D000670 ORTHO05D000529 1.2e-11 74.3 202 33.2
Cc02_g34100 Coffea canephora HOM05D000670 ORTHO05D000529 2.7e-11 73.2 168 38.7
Rhsim10G0085200 Rhododendron simsii HOM05D000670 ORTHO05D000529 2.7e-11 73.2 210 34.3
TAR625G0050 Trochodendron aralioides HOM05D000670 ORTHO05D000529 2.7e-11 73.2 218 32.1
vmacro22434 Vaccinium macrocarpon HOM05D000670 ORTHO05D000529 2.7e-11 73.2 107 48.6
vmacro23433 Vaccinium macrocarpon HOM05D000670 ORTHO05D000529 2.7e-11 73.2 107 48.6
SGA_v2.0_scaffold149G36552 Striga asiatica HOM05D000670 ORTHO05D000529 4.6e-11 72.4 208 32.2
Cc00_g24080 Coffea canephora HOM05D000670 ORTHO05D000529 1.7e-10 70.5 127 37.8
Cc02_g34070 Coffea canephora HOM05D000670 ORTHO05D000529 1.7e-10 70.5 207 32.9
MBI16_g14666_MAGBIO Magnolia biondii HOM05D000670 ORTHO05D000529 2.3e-10 70.1 220 31.8
TAR376G1109 Trochodendron aralioides HOM05D000670 ORTHO05D000529 2.3e-10 70.1 210 31.9
MBI16_g33602_MAGBIO Magnolia biondii HOM05D000670 ORTHO05D000529 3.0e-10 69.7 220 31.8
Cc02_g34050 Coffea canephora HOM05D000670 ORTHO05D000529 5.0e-10 68.9 123 40.7
unitig_32.g11879 Utricularia gibba HOM05D000670 ORTHO05D000529 5.0e-10 68.9 104 41.3
Oeu061820.1 Olea europaea HOM05D000670 ORTHO05D000529 6.6e-10 68.6 100 45.0
TAR625G1117 Trochodendron aralioides HOM05D000670 ORTHO05D000529 8.6e-10 68.2 217 32.7
TAR381G1681 Trochodendron aralioides HOM05D000670 ORTHO05D000529 1.1e-09 67.8 215 29.3
Cc02_g34000 Coffea canephora HOM05D000670 ORTHO05D000529 2.5e-09 66.6 184 29.9
SGA_v2.0_scaffold174G39230 Striga asiatica HOM05D000670 ORTHO05D000529 3.3e-09 66.2 43 74.4
unitig_748.g8744 Utricularia gibba HOM05D000670 ORTHO05D000529 5.6e-09 65.5 105 38.1
SGA_v2.0_scaffold149G36543 Striga asiatica HOM05D000670 ORTHO05D000529 7.3e-09 65.1 66 54.5
Ciclev10027504m.g Citrus clementina HOM05D000670 ORTHO05D000529 2.8e-08 63.2 71 47.9
unitig_32.g10646 Utricularia gibba HOM05D000670 ORTHO05D000529 6.2e-08 62.0 48 60.4
AUR62005877 Chenopodium quinoa HOM05D000670 ORTHO05D000529 8.1e-08 61.6 73 47.9
TAR628G0521 Trochodendron aralioides HOM05D000670 ORTHO05D000529 8.1e-08 61.6 222 29.3
Lj2g0002533 Lotus japonicus HOM05D000670 ORTHO05D000529 1.1e-07 61.2 112 33.9
Phvul.003G231200 Phaseolus vulgaris HOM05D000670 ORTHO05D000529 1.4e-07 60.8 64 48.4
Thhalv10000426m.g Eutrema salsugineum HOM05D000670 ORTHO05D000529 3.1e-07 59.7 91 41.8
Lj3g0027438 Lotus japonicus HOM05D000670 ORTHO05D000529 3.1e-07 59.7 168 30.4
Medtr5g014600 Medicago truncatula HOM05D000670 ORTHO05D000529 3.1e-07 59.7 110 38.2
arahy.Tifrunner.gnm1.ann1.662K4C Arachis hypogaea HOM05D000670 ORTHO05D000529 4.0e-07 59.3 100 38.0
Nn5g29131 Nelumbo nucifera HOM05D000670 ORTHO05D000529 4.0e-07 59.3 208 29.8
Cfa006808 Carpinus fangiana HOM05D000670 ORTHO05D000529 5.2e-07 58.9 199 30.2
Os03g0229100 Oryza sativa ssp. japonica HOM05D000670 ORTHO05D000529 5.2e-07 58.9 59 50.8
QL11p027110 Quercus lobata HOM05D000670 ORTHO05D000529 5.2e-07 58.9 158 32.3
TAR381G1653 Trochodendron aralioides HOM05D000670 ORTHO05D000529 5.2e-07 58.9 194 31.4
Glyma.08G063900 Glycine max HOM05D000670 ORTHO05D000529 6.8e-07 58.5 67 50.7
TAR625G0194 Trochodendron aralioides HOM05D000670 ORTHO05D000529 6.8e-07 58.5 214 29.0
Ca_24655_v3 Cicer arietinum L. HOM05D000670 ORTHO05D000529 8.9e-07 58.2 117 35.9
Glyma.07G185300 Glycine max HOM05D000670 ORTHO05D000529 8.9e-07 58.2 131 35.9
MBI16_g35808_MAGBIO Magnolia biondii HOM05D000670 ORTHO05D000529 8.9e-07 58.2 204 29.9
THA.LOC104820171 Tarenaya hassleriana HOM05D000670 ORTHO05D000529 8.9e-07 58.2 47 63.8
BcaC07g41039 Brassica carinata HOM05D000670 ORTHO05D000529 1.2e-06 57.8 49 55.1
C03p78980 Brassica napus HOM05D000670 ORTHO05D000529 1.2e-06 57.8 88 43.2
C08p40420 Brassica napus HOM05D000670 ORTHO05D000529 1.2e-06 57.8 49 55.1
BolC8t51611H Brassica oleracea HOM05D000670 ORTHO05D000529 1.2e-06 57.8 49 55.1
Dinv16045 Davidia involucrata HOM05D000670 ORTHO05D000529 1.2e-06 57.8 145 32.4
Eucgr.I00634 Eucalyptus grandis HOM05D000670 ORTHO05D000529 1.2e-06 57.8 60 50.0
Ah.02g125540 Amaranthus hybridus HOM05D000670 ORTHO05D000529 1.5e-06 57.4 39 69.2
MELO3C007679.2 Cucumis melo HOM05D000670 ORTHO05D000529 1.5e-06 57.4 99 36.4
Lsat_1_v5_gn_7_83480 Lactuca sativa HOM05D000670 ORTHO05D000529 1.5e-06 57.4 38 68.4
Sc18g0007280 Simmondsia chinensis HOM05D000670 ORTHO05D000529 1.5e-06 57.4 108 35.2
MSTRG.23637 Avicennia marina HOM05D000670 ORTHO05D000529 2.0e-06 57.0 201 30.3
BcaNung00970 Brassica carinata HOM05D000670 ORTHO05D000529 2.0e-06 57.0 77 46.8
AUR62014013 Chenopodium quinoa HOM05D000670 ORTHO05D000529 2.0e-06 57.0 76 43.4
AUR62032870 Chenopodium quinoa HOM05D000670 ORTHO05D000529 2.0e-06 57.0 39 69.2
DCAR_021919 Daucus carota HOM05D000670 ORTHO05D000529 2.0e-06 57.0 70 44.3
EL10Ac6g14580 Beta vulgaris HOM05D000670 ORTHO05D000529 2.6e-06 56.6 44 65.9
AUR62010677 Chenopodium quinoa HOM05D000670 ORTHO05D000529 2.6e-06 56.6 67 44.8
Duzib147G0694 Durio zibethinus HOM05D000670 ORTHO05D000529 2.6e-06 56.6 49 55.1
Sp4g01760 Schrenkiella parvula HOM05D000670 ORTHO05D000529 2.6e-06 56.6 70 41.4
TAR376G1164 Trochodendron aralioides HOM05D000670 ORTHO05D000529 2.6e-06 56.6 205 28.3
Ah.03g140320 Amaranthus hybridus HOM05D000670 ORTHO05D000529 3.4e-06 56.2 39 69.2
CiPaw.07G040800 Carya illinoinensis HOM05D000670 ORTHO05D000529 3.4e-06 56.2 114 36.0
Ciclev10027158m.g Citrus clementina HOM05D000670 ORTHO05D000529 3.4e-06 56.2 191 28.8
Gohir.A02G147300 Gossypium hirsutum HOM05D000670 ORTHO05D000529 3.4e-06 56.2 37 67.6
Gohir.D03G033100 Gossypium hirsutum HOM05D000670 ORTHO05D000529 3.4e-06 56.2 37 67.6
Gorai.003G034700 Gossypium raimondii HOM05D000670 ORTHO05D000529 3.4e-06 56.2 37 67.6
SalBow7G2049 Salvia bowleyana HOM05D000670 ORTHO05D000529 3.4e-06 56.2 59 50.8
Sp3g27680 Schrenkiella parvula HOM05D000670 ORTHO05D000529 3.4e-06 56.2 36 75.0
arahy.Tifrunner.gnm1.ann1.HVT10G Arachis hypogaea HOM05D000670 ORTHO05D000529 4.4e-06 55.8 37 64.9
EL10Ac8g19291 Beta vulgaris HOM05D000670 ORTHO05D000529 4.4e-06 55.8 39 69.2
BcaC01g00370 Brassica carinata HOM05D000670 ORTHO05D000529 4.4e-06 55.8 88 42.0
BolC3t20140H Brassica oleracea HOM05D000670 ORTHO05D000529 4.4e-06 55.8 88 42.0
Cc02_g34040 Coffea canephora HOM05D000670 ORTHO05D000529 4.4e-06 55.8 55 56.4
Glyma.17G156100 Glycine max HOM05D000670 ORTHO05D000529 4.4e-06 55.8 37 64.9
VMungo0251G3300 Vigna mungo HOM05D000670 ORTHO05D000529 4.4e-06 55.8 47 57.4
arahy.Tifrunner.gnm1.ann1.DRPT5I Arachis hypogaea HOM05D000670 ORTHO05D000529 5.8e-06 55.5 156 33.3
arahy.Tifrunner.gnm1.ann1.DXN5ZD Arachis hypogaea HOM05D000670 ORTHO05D000529 5.8e-06 55.5 37 64.9
DCAR_010769 Daucus carota HOM05D000670 ORTHO05D000529 5.8e-06 55.5 59 47.5
DCAR_010770 Daucus carota HOM05D000670 ORTHO05D000529 5.8e-06 55.5 43 58.1
Dinv26986 Davidia involucrata HOM05D000670 ORTHO05D000529 5.8e-06 55.5 89 37.1
Duzib264G0241 Durio zibethinus HOM05D000670 ORTHO05D000529 5.8e-06 55.5 37 67.6
Lj5g0005318 Lotus japonicus HOM05D000670 ORTHO05D000529 5.8e-06 55.5 37 62.2
SalBow7G4691 Salvia bowleyana HOM05D000670 ORTHO05D000529 5.8e-06 55.5 37 64.9
TAR376G0520 Trochodendron aralioides HOM05D000670 ORTHO05D000529 5.8e-06 55.5 94 40.4
arahy.Tifrunner.gnm1.ann1.K8539K Arachis hypogaea HOM05D000670 ORTHO05D000529 7.5e-06 55.1 168 33.3
BcaC01g03100 Brassica carinata HOM05D000670 ORTHO05D000529 7.5e-06 55.1 36 72.2
A03p45160 Brassica napus HOM05D000670 ORTHO05D000529 7.5e-06 55.1 49 59.2
C03p56030 Brassica napus HOM05D000670 ORTHO05D000529 7.5e-06 55.1 36 72.2
BolC3t17890H Brassica oleracea HOM05D000670 ORTHO05D000529 7.5e-06 55.1 36 72.2
Carub.0007s0237 Capsella rubella HOM05D000670 ORTHO05D000529 7.5e-06 55.1 50 60.0
AUR62017204 Chenopodium quinoa HOM05D000670 ORTHO05D000529 7.5e-06 55.1 39 64.1
AUR62017206 Chenopodium quinoa HOM05D000670 ORTHO05D000529 7.5e-06 55.1 39 64.1
Dinv23075 Davidia involucrata HOM05D000670 ORTHO05D000529 7.5e-06 55.1 37 64.9
Glyma.17G155900 Glycine max HOM05D000670 ORTHO05D000529 7.5e-06 55.1 87 42.5
Lj2g0013602 Lotus japonicus HOM05D000670 ORTHO05D000529 7.5e-06 55.1 62 43.5
Oeu051770.1 Olea europaea HOM05D000670 ORTHO05D000529 7.5e-06 55.1 130 32.3
QL06p037875 Quercus lobata HOM05D000670 ORTHO05D000529 7.5e-06 55.1 37 67.6
Ah.03g134450 Amaranthus hybridus HOM05D000670 ORTHO05D000529 9.9e-06 54.7 49 53.1
Aqoxy439s001 Aquilegia oxysepala HOM05D000670 ORTHO05D000529 9.9e-06 54.7 188 29.3
Aqoxy6G00605 Aquilegia oxysepala HOM05D000670 ORTHO05D000529 9.9e-06 54.7 188 29.3
A09p57330 Brassica napus HOM05D000670 ORTHO05D000529 9.9e-06 54.7 65 41.5
CSS0043636 Camellia sinensis var. sinensis HOM05D000670 ORTHO05D000529 9.9e-06 54.7 106 34.9
ECA232G2009 Erigeron canadensis HOM05D000670 ORTHO05D000529 9.9e-06 54.7 37 59.5
PGR031G0064 Punica granatum HOM05D000670 ORTHO05D000529 9.9e-06 54.7 37 67.6
Thecc.01G081400 Theobroma cacao HOM05D000670 ORTHO05D000529 9.9e-06 54.7 64 45.3


User provided reference genes

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