Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold148G36473 Striga asiatica HOM05D007413 ORTHO05D009357 5.1e-48 194.1 100 100.0
Migut.K01283 Erythranthe guttata HOM05D007413 ORTHO05D009357 3.5e-17 91.7 110 54.5
Oeu062157.1 Olea europaea HOM05D007413 ORTHO05D009357 7.9e-17 90.5 96 55.2
Migut.H00635 Erythranthe guttata HOM05D007413 ORTHO05D009357 2.5e-15 85.5 86 57.0
Nitab4.5_0000565g0230 Nicotiana tabacum HOM05D007413 ORTHO05D009357 4.8e-14 81.3 83 55.4
Oeu007062.1 Olea europaea HOM05D007413 ORTHO05D009357 8.1e-14 80.5 110 46.4
Nitab4.5_0010051g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 1.1e-13 80.1 62 66.1
CAN.G206.219 Capsicum annuum HOM05D007413 ORTHO05D009357 2.4e-13 79.0 65 58.5
SalBow1G6503 Salvia bowleyana HOM05D007413 ORTHO05D009357 2.4e-13 79.0 52 69.2
Sopen02g033450 Solanum pennellii HOM05D007413 ORTHO05D009357 3.1e-13 78.6 97 49.5
Actinidia26249 Actinidia chinensis HOM05D007413 ORTHO05D009357 2.0e-12 75.9 70 57.1
Cc07_g04120 Coffea canephora HOM05D007413 ORTHO05D009357 2.0e-12 75.9 93 43.0
CANSAT64G0406 Cannabis sativa HOM05D007413 ORTHO05D009357 3.4e-12 75.1 88 51.1
Oeu010247.1 Olea europaea HOM05D007413 ORTHO05D009357 3.4e-12 75.1 86 51.2
Solyc02g088740.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 3.4e-12 75.1 98 45.9
Hma1.2p1_0481F.1_g162070 Hydrangea macrophylla HOM05D007413 ORTHO05D009357 1.3e-11 73.2 88 53.4
Manes.01G097200 Manihot esculenta HOM05D007413 ORTHO05D009357 1.7e-11 72.8 89 48.3
CAN.G398.10 Capsicum annuum HOM05D007413 ORTHO05D009357 3.8e-11 71.6 62 56.5
Sopen02g016170 Solanum pennellii HOM05D007413 ORTHO05D009357 6.5e-11 70.9 65 58.5
Aqoxy3G03598 Aquilegia oxysepala HOM05D007413 ORTHO05D009357 8.4e-11 70.5 93 47.3
Manes.02G054200 Manihot esculenta HOM05D007413 ORTHO05D009357 1.9e-10 69.3 89 44.9
QL02p067998 Quercus lobata HOM05D007413 ORTHO05D009357 2.5e-10 68.9 101 42.6
Solyc02g066970.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 2.5e-10 68.9 65 55.4
unitig_62.g23378 Utricularia gibba HOM05D007413 ORTHO05D009357 4.2e-10 68.2 96 44.8
CSS0009905 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 5.5e-10 67.8 93 46.2
CSS0018085 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 5.5e-10 67.8 93 46.2
Thecc.04G093400 Theobroma cacao HOM05D007413 ORTHO05D009357 5.5e-10 67.8 103 43.7
Cfa007655 Carpinus fangiana HOM05D007413 ORTHO05D009357 9.3e-10 67.0 90 44.4
Potri.017G093000 Populus trichocarpa HOM05D007413 ORTHO05D009357 9.3e-10 67.0 95 44.2
CSS0018963 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 1.2e-09 66.6 96 45.8
SGA_v2.0_scaffold52G19169 Striga asiatica HOM05D007413 ORTHO05D009357 2.7e-09 65.5 108 41.7
Nn4g23392 Nelumbo nucifera HOM05D007413 ORTHO05D009357 3.5e-09 65.1 95 45.3
Potri.004G119600 Populus trichocarpa HOM05D007413 ORTHO05D009357 4.6e-09 64.7 98 42.9
Lalb_Chr06g0174991 Lupinus albus HOM05D007413 ORTHO05D009357 6.0e-09 64.3 59 54.2
Psat1g067640 Pisum sativum HOM05D007413 ORTHO05D009357 6.0e-09 64.3 81 45.7
Duzib147G0133 Durio zibethinus HOM05D007413 ORTHO05D009357 7.9e-09 63.9 102 43.1
Nn3g17420 Nelumbo nucifera HOM05D007413 ORTHO05D009357 1.0e-08 63.5 102 43.1
TPR.G10008 Trifolium pratense HOM05D007413 ORTHO05D009357 1.0e-08 63.5 82 45.1
AT5G39240 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 1.3e-08 63.2 94 44.7
MELO3C024851.2 Cucumis melo HOM05D007413 ORTHO05D009357 1.3e-08 63.2 74 48.6
PGSC0003DMG400025144 Solanum tuberosum HOM05D007413 ORTHO05D009357 1.3e-08 63.2 108 39.8
SalBow1G0329 Salvia bowleyana HOM05D007413 ORTHO05D009357 1.8e-08 62.8 106 42.5
THA.LOC109116393 Tarenaya hassleriana HOM05D007413 ORTHO05D009357 2.3e-08 62.4 98 41.8
Cpa.g.sc3362.1 Carica papaya HOM05D007413 ORTHO05D009357 3.0e-08 62.0 88 39.8
Eucgr.I02025 Eucalyptus grandis HOM05D007413 ORTHO05D009357 3.0e-08 62.0 82 45.1
Glyma.13G057000 Glycine max HOM05D007413 ORTHO05D009357 3.0e-08 62.0 100 37.0
THA.LOC104825781 Tarenaya hassleriana HOM05D007413 ORTHO05D009357 3.0e-08 62.0 94 42.6
Gorai.012G049200 Gossypium raimondii HOM05D007413 ORTHO05D009357 3.9e-08 61.6 86 44.2
Lj2g0007962 Lotus japonicus HOM05D007413 ORTHO05D009357 3.9e-08 61.6 62 48.4
ClCG07G007410 Citrullus lanatus HOM05D007413 ORTHO05D009357 5.1e-08 61.2 91 45.1
Ciclev10013609m.g Citrus clementina HOM05D007413 ORTHO05D009357 5.1e-08 61.2 67 47.8
Lsat_1_v5_gn_2_87601 Lactuca sativa HOM05D007413 ORTHO05D009357 5.1e-08 61.2 63 50.8
VMungo0464G1276 Vigna mungo HOM05D007413 ORTHO05D009357 5.1e-08 61.2 65 46.2
AL7G51220 Arabidopsis lyrata HOM05D007413 ORTHO05D009357 6.7e-08 60.8 90 44.4
Gohir.A05G371900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 6.7e-08 60.8 86 43.0
Gohir.D04G043900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 6.7e-08 60.8 86 44.2
Nitab4.5_0005916g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 6.7e-08 60.8 84 45.2
Sabra04G0069100 Salix brachista HOM05D007413 ORTHO05D009357 6.7e-08 60.8 52 65.4
Carub.0007s3668 Capsella rubella HOM05D007413 ORTHO05D009357 8.7e-08 60.5 74 47.3
CARHR263170 Cardamine hirsuta HOM05D007413 ORTHO05D009357 1.1e-07 60.1 97 42.3
Lsat_1_v5_gn_4_171221 Lactuca sativa HOM05D007413 ORTHO05D009357 1.5e-07 59.7 56 55.4
CiPaw.03G089400 Carya illinoinensis HOM05D007413 ORTHO05D009357 1.9e-07 59.3 92 42.4
COL.COLO4_00052 Corchorus olitorius HOM05D007413 ORTHO05D009357 1.9e-07 59.3 60 53.3
FAN02G2783 Fragaria x ananassa HOM05D007413 ORTHO05D009357 1.9e-07 59.3 89 39.3
Sabra17G0082000 Salix brachista HOM05D007413 ORTHO05D009357 2.5e-07 58.9 113 43.4
BcaC02g09685 Brassica carinata HOM05D007413 ORTHO05D009357 3.3e-07 58.5 100 43.0
A04p11950 Brassica napus HOM05D007413 ORTHO05D009357 3.3e-07 58.5 100 43.0
C04p45600 Brassica napus HOM05D007413 ORTHO05D009357 3.3e-07 58.5 100 43.0
BolC4t26142H Brassica oleracea HOM05D007413 ORTHO05D009357 3.3e-07 58.5 100 43.0
BraA04t16860Z Brassica rapa HOM05D007413 ORTHO05D009357 3.3e-07 58.5 100 43.0
FvH4_6g47010 Fragaria vesca HOM05D007413 ORTHO05D009357 3.3e-07 58.5 101 39.6
FAN09G1793 Fragaria x ananassa HOM05D007413 ORTHO05D009357 3.3e-07 58.5 101 39.6
FAN14G4532 Fragaria x ananassa HOM05D007413 ORTHO05D009357 3.3e-07 58.5 101 39.6
TWI34G0597 Tripterygium wilfordii HOM05D007413 ORTHO05D009357 4.3e-07 58.2 59 55.9
Medtr6g015150 Medicago truncatula HOM05D007413 ORTHO05D009357 5.7e-07 57.8 48 60.4
Phvul.004G035200 Phaseolus vulgaris HOM05D007413 ORTHO05D009357 5.7e-07 57.8 55 52.7
Aa31LG2G3920 Aethionema arabicum HOM05D007413 ORTHO05D009357 7.4e-07 57.4 70 50.0
PGR004G0469 Punica granatum HOM05D007413 ORTHO05D009357 7.4e-07 57.4 72 44.4
AL5G19460 Arabidopsis lyrata HOM05D007413 ORTHO05D009357 9.6e-07 57.0 94 45.7
ClCG11G004700 Citrullus lanatus HOM05D007413 ORTHO05D009357 9.6e-07 57.0 95 40.0
Carub.0005s0809 Capsella rubella HOM05D007413 ORTHO05D009357 2.1e-06 55.8 97 39.2
Thhalv10027993m.g Eutrema salsugineum HOM05D007413 ORTHO05D009357 2.1e-06 55.8 102 44.1
FAN05G2048 Fragaria x ananassa HOM05D007413 ORTHO05D009357 2.1e-06 55.8 102 37.3
Lalb_Chr02g0158971 Lupinus albus HOM05D007413 ORTHO05D009357 2.1e-06 55.8 59 50.8
MD17G1057900 Malus domestica HOM05D007413 ORTHO05D009357 2.1e-06 55.8 89 42.7
BcaB06g27281 Brassica carinata HOM05D007413 ORTHO05D009357 2.8e-06 55.5 100 42.0
Sp7g02750 Schrenkiella parvula HOM05D007413 ORTHO05D009357 2.8e-06 55.5 104 39.4
TAR629G1767 Trochodendron aralioides HOM05D007413 ORTHO05D009357 2.8e-06 55.5 45 57.8
AT3G29370 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 3.7e-06 55.1 95 41.1
Sc14g0006230 Simmondsia chinensis HOM05D007413 ORTHO05D009357 4.8e-06 54.7 91 39.6
Prupe.3G256400 Prunus persica HOM05D007413 ORTHO05D009357 6.2e-06 54.3 57 52.6
Aa31LG9G16690 Aethionema arabicum HOM05D007413 ORTHO05D009357 8.2e-06 53.9 57 50.9


User provided reference genes

Program Settings