Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold148G36445 Striga asiatica HOM05D004605 ORTHO05D005804 1.5e-132 476.1 231 100.0
Migut.H00587 Erythranthe guttata HOM05D004605 ORTHO05D005804 3.9e-104 381.7 232 76.3
MSTRG.15437 Avicennia marina HOM05D004605 ORTHO05D005804 5.9e-100 367.9 215 81.4
Oeu031839.1 Olea europaea HOM05D004605 ORTHO05D005804 7.7e-100 367.5 214 79.0
SalBow1G3999 Salvia bowleyana HOM05D004605 ORTHO05D005804 7.7e-100 367.5 224 77.2
GSVIVG01036547001 Vitis vinifera HOM05D004605 ORTHO05D005804 3.2e-98 362.1 213 77.5
Nitab4.5_0001339g0150 Nicotiana tabacum HOM05D004605 ORTHO05D005804 8.8e-96 354.0 222 72.1
TAR629G2115 Trochodendron aralioides HOM05D004605 ORTHO05D005804 3.3e-95 352.1 214 75.7
Hma1.2p1_0474F.1_g160750 Hydrangea macrophylla HOM05D004605 ORTHO05D005804 4.4e-95 351.7 216 76.4
Peaxi162Scf00020g10235 Petunia axillaris HOM05D004605 ORTHO05D005804 4.4e-95 351.7 220 72.3
Duzib133G0947 Durio zibethinus HOM05D004605 ORTHO05D005804 9.7e-95 350.5 230 71.3
Atru.chr8.648 Acer truncatum HOM05D004605 ORTHO05D005804 1.7e-94 349.7 211 77.3
PSO675G6317 Papaver somniferum HOM05D004605 ORTHO05D005804 1.7e-94 349.7 211 75.4
Sopen02g034020 Solanum pennellii HOM05D004605 ORTHO05D005804 3.7e-94 348.6 207 73.4
Solyc02g089230.3 Solanum lycopersicum HOM05D004605 ORTHO05D005804 6.3e-94 347.8 224 69.6
PGSC0003DMG400001379 Solanum tuberosum HOM05D004605 ORTHO05D005804 6.3e-94 347.8 209 73.7
Gohir.D07G186600 Gossypium hirsutum HOM05D004605 ORTHO05D005804 1.1e-93 347.1 220 72.7
Gorai.001G207200 Gossypium raimondii HOM05D004605 ORTHO05D005804 1.1e-93 347.1 220 72.7
Nitab4.5_0007530g0010 Nicotiana tabacum HOM05D004605 ORTHO05D005804 1.1e-93 347.1 207 73.9
Actinidia26268 Actinidia chinensis HOM05D004605 ORTHO05D005804 4.1e-93 345.1 223 71.7
Ciclev10012619m.g Citrus clementina HOM05D004605 ORTHO05D005804 5.3e-93 344.7 218 73.4
Cpa.g.sc14.228 Carica papaya HOM05D004605 ORTHO05D005804 1.2e-92 343.6 226 71.2
PSO732G0027 Papaver somniferum HOM05D004605 ORTHO05D005804 1.2e-92 343.6 211 74.9
Thecc.04G106100 Theobroma cacao HOM05D004605 ORTHO05D005804 1.6e-92 343.2 217 72.4
CAN.G497.71 Capsicum annuum HOM05D004605 ORTHO05D005804 2.0e-92 342.8 209 72.2
Lju361C6G5 Lonicera japonica HOM05D004605 ORTHO05D005804 2.7e-92 342.4 214 71.5
Potri.017G100000 Populus trichocarpa HOM05D004605 ORTHO05D005804 5.9e-92 341.3 217 73.7
COL.COLO4_10258 Corchorus olitorius HOM05D004605 ORTHO05D005804 7.7e-92 340.9 214 71.5
HanXRQChr14g0452481 Helianthus annuus HOM05D004605 ORTHO05D005804 1.0e-91 340.5 219 71.7
Gohir.A07G179800 Gossypium hirsutum HOM05D004605 ORTHO05D005804 1.3e-91 340.1 217 71.9
MSTRG.15436 Avicennia marina HOM05D004605 ORTHO05D005804 1.7e-91 339.7 193 80.3
Manes.01G103400 Manihot esculenta HOM05D004605 ORTHO05D005804 3.8e-91 338.6 214 72.4
Rhsim08G0077200 Rhododendron simsii HOM05D004605 ORTHO05D005804 6.5e-91 337.8 212 73.6
Sabra17G0086200 Salix brachista HOM05D004605 ORTHO05D005804 6.5e-91 337.8 217 71.9
Duzib138G1714 Durio zibethinus HOM05D004605 ORTHO05D005804 3.2e-90 335.5 215 73.0
Lsat_1_v5_gn_2_90241 Lactuca sativa HOM05D004605 ORTHO05D005804 3.2e-90 335.5 216 70.8
Manes.02G059400 Manihot esculenta HOM05D004605 ORTHO05D005804 3.2e-90 335.5 214 70.6
MELO3C026298.2 Cucumis melo HOM05D004605 ORTHO05D005804 4.2e-90 335.1 205 75.1
CsaV3_4G010080 Cucumis sativus L. HOM05D004605 ORTHO05D005804 1.6e-89 333.2 217 71.9
TWI60G1007 Tripterygium wilfordii HOM05D004605 ORTHO05D005804 2.1e-89 332.8 212 71.2
Sed0020846 Sechium edule HOM05D004605 ORTHO05D005804 6.1e-89 331.3 226 67.3
Cfa007695 Carpinus fangiana HOM05D004605 ORTHO05D005804 3.0e-88 328.9 211 71.6
ClCG07G016040 Citrullus lanatus HOM05D004605 ORTHO05D005804 4.0e-88 328.6 217 71.4
VMungo1383G2960 Vigna mungo HOM05D004605 ORTHO05D005804 8.8e-88 327.4 207 71.5
Carub.0007s3694 Capsella rubella HOM05D004605 ORTHO05D005804 1.2e-87 327.0 219 69.4
Glyma.18G273900 Glycine max HOM05D004605 ORTHO05D005804 2.0e-87 326.2 209 70.8
Hund16233 Selenicereus undatus HOM05D004605 ORTHO05D005804 2.0e-87 326.2 213 70.9
THA.LOC104805526 Tarenaya hassleriana HOM05D004605 ORTHO05D005804 3.4e-87 325.5 209 72.2
Aqoxy3G03715 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 4.4e-87 325.1 220 67.7
CSS0024904 Camellia sinensis var. sinensis HOM05D004605 ORTHO05D005804 4.4e-87 325.1 212 70.8
Psat3g203400 Pisum sativum HOM05D004605 ORTHO05D005804 4.4e-87 325.1 214 68.7
Glyma.08G251200 Glycine max HOM05D004605 ORTHO05D005804 5.7e-87 324.7 207 72.5
Medtr7g016650 Medicago truncatula HOM05D004605 ORTHO05D005804 5.7e-87 324.7 218 68.8
QL02p065873 Quercus lobata HOM05D004605 ORTHO05D005804 9.8e-87 323.9 210 70.0
AL7G51520 Arabidopsis lyrata HOM05D004605 ORTHO05D005804 2.8e-86 322.4 213 69.5
AT5G38900 Arabidopsis thaliana HOM05D004605 ORTHO05D005804 2.8e-86 322.4 213 69.5
CiPaw.03G083000 Carya illinoinensis HOM05D004605 ORTHO05D005804 4.8e-86 321.6 214 67.8
Haze_14382 Corylus avellana HOM05D004605 ORTHO05D005804 6.3e-86 321.2 215 67.9
BraA07t29690Z Brassica rapa HOM05D004605 ORTHO05D005804 8.3e-86 320.9 214 68.7
Lalb_Chr10g0092731 Lupinus albus HOM05D004605 ORTHO05D005804 8.3e-86 320.9 209 69.9
BcaB02g07994 Brassica carinata HOM05D004605 ORTHO05D005804 1.1e-85 320.5 217 69.1
C06p18440 Brassica napus HOM05D004605 ORTHO05D005804 1.1e-85 320.5 214 69.2
BcaC08g44406 Brassica carinata HOM05D004605 ORTHO05D005804 1.4e-85 320.1 214 69.2
BolC6t37056H Brassica oleracea HOM05D004605 ORTHO05D005804 1.4e-85 320.1 214 69.2
A07p19860 Brassica napus HOM05D004605 ORTHO05D005804 2.4e-85 319.3 214 68.2
ECA238G2860 Erigeron canadensis HOM05D004605 ORTHO05D005804 2.4e-85 319.3 209 71.3
Phvul.008G027000 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 2.4e-85 319.3 210 67.6
Sp7g03000 Schrenkiella parvula HOM05D004605 ORTHO05D005804 2.4e-85 319.3 223 65.9
Aa31LG9G16810 Aethionema arabicum HOM05D004605 ORTHO05D005804 3.1e-85 318.9 215 70.7
Prupe.3G249100 Prunus persica HOM05D004605 ORTHO05D005804 3.1e-85 318.9 213 69.0
Lj1g0025970 Lotus japonicus HOM05D004605 ORTHO05D005804 5.4e-85 318.2 207 69.6
Thhalv10027927m.g Eutrema salsugineum HOM05D004605 ORTHO05D005804 9.1e-85 317.4 213 69.0
Phvul.008G027600 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 9.1e-85 317.4 207 70.0
arahy.Tifrunner.gnm1.ann1.M6S7AL Arachis hypogaea HOM05D004605 ORTHO05D005804 1.6e-84 316.6 215 63.3
CANSAT64G2231 Cannabis sativa HOM05D004605 ORTHO05D005804 1.6e-84 316.6 209 68.9
TPR.G23408 Trifolium pratense HOM05D004605 ORTHO05D005804 2.0e-84 316.2 217 68.2
arahy.Tifrunner.gnm1.ann1.90K79T Arachis hypogaea HOM05D004605 ORTHO05D005804 2.7e-84 315.8 215 63.3
Phvul.008G026800 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 2.7e-84 315.8 207 68.6
Eucgr.I02062 Eucalyptus grandis HOM05D004605 ORTHO05D005804 1.7e-83 313.2 245 59.6
MD17G1065700 Malus domestica HOM05D004605 ORTHO05D005804 1.7e-83 313.2 209 69.9
CARHR263630 Cardamine hirsuta HOM05D004605 ORTHO05D005804 5.0e-83 311.6 207 69.6
VMungo1383G3490 Vigna mungo HOM05D004605 ORTHO05D005804 6.5e-83 311.2 207 68.6
Ca_06902_v3 Cicer arietinum L. HOM05D004605 ORTHO05D005804 1.5e-82 310.1 217 66.4
Aqoxy3G03716 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 2.5e-82 309.3 213 65.7
CiPaw.03G083100 Carya illinoinensis HOM05D004605 ORTHO05D005804 2.5e-82 309.3 214 66.4
MD09G1074300 Malus domestica HOM05D004605 ORTHO05D005804 4.2e-82 308.5 207 68.6
Aqoxy3G03714 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 7.2e-82 307.8 215 63.3
DCAR_021425 Daucus carota HOM05D004605 ORTHO05D005804 6.1e-81 304.7 213 67.1
EL10Ac2g04442 Beta vulgaris HOM05D004605 ORTHO05D005804 3.4e-79 298.9 214 63.6
RcHm_v2.0_Chr2g0164921 Rosa chinensis HOM05D004605 ORTHO05D005804 7.5e-79 297.7 212 65.1
Zm00001eb049940 Zea mays HOM05D004605 ORTHO05D005804 7.5e-79 297.7 211 66.4
Os03g0598900 Oryza sativa ssp. japonica HOM05D004605 ORTHO05D005804 1.7e-78 296.6 219 63.9
Zm00001eb219300 Zea mays HOM05D004605 ORTHO05D005804 1.4e-77 293.5 216 63.9
FvH4_6g46390 Fragaria vesca HOM05D004605 ORTHO05D005804 1.8e-77 293.1 216 63.4
HPP92_012260 Vanilla planifolia HOM05D004605 ORTHO05D005804 1.2e-76 290.4 210 61.4
FAN05G4053 Fragaria x ananassa HOM05D004605 ORTHO05D005804 1.7e-75 286.6 224 60.3
ATR0827G055 Amborella trichopoda HOM05D004605 ORTHO05D005804 8.6e-75 284.3 209 62.7
MBI16_g34534_MAGBIO Magnolia biondii HOM05D004605 ORTHO05D005804 3.6e-73 278.9 214 61.7
AUR62023160 Chenopodium quinoa HOM05D004605 ORTHO05D005804 8.0e-73 277.7 200 65.5
Eucgr.B03744 Eucalyptus grandis HOM05D004605 ORTHO05D005804 5.8e-71 271.6 206 60.7
Mapoly0001s0057 Marchantia polymorpha HOM05D004605 ORTHO05D005804 8.3e-70 267.7 208 57.7
FAN14G2038 Fragaria x ananassa HOM05D004605 ORTHO05D005804 1.1e-69 267.3 195 63.1
Prupe.3G249000 Prunus persica HOM05D004605 ORTHO05D005804 1.4e-69 266.9 209 56.5
SMO223G0030 Selaginella moellendorffii HOM05D004605 ORTHO05D005804 1.9e-69 266.5 204 58.8
Eucgr.L00721 Eucalyptus grandis HOM05D004605 ORTHO05D005804 1.6e-68 263.5 198 62.1
vmacro18128 Vaccinium macrocarpon HOM05D004605 ORTHO05D005804 2.7e-68 262.7 197 65.0
Sc10g0000600 Simmondsia chinensis HOM05D004605 ORTHO05D005804 2.3e-67 259.6 172 66.9
Pp3c14_20450 Physcomitrium patens HOM05D004605 ORTHO05D005804 3.4e-63 245.7 205 55.6
AUR62009481 Chenopodium quinoa HOM05D004605 ORTHO05D005804 6.4e-62 241.5 198 60.6
arahy.Tifrunner.gnm1.ann1.XASR8W Arachis hypogaea HOM05D004605 ORTHO05D005804 2.4e-61 239.6 202 53.0
Cc07_g04470 Coffea canephora HOM05D004605 ORTHO05D005804 3.2e-61 239.2 149 71.1
FAN02G3403 Fragaria x ananassa HOM05D004605 ORTHO05D005804 7.0e-61 238.0 160 67.5
SEGI_21234 Sequoiadendron giganteum HOM05D004605 ORTHO05D005804 3.0e-59 232.6 211 47.9
RcHm_v2.0_Chr2g0164911 Rosa chinensis HOM05D004605 ORTHO05D005804 9.5e-58 227.6 209 52.2
FvH4_6g46370 Fragaria vesca HOM05D004605 ORTHO05D005804 1.4e-56 223.8 209 52.6
AUR62024435 Chenopodium quinoa HOM05D004605 ORTHO05D005804 5.2e-56 221.9 139 71.2
QL02p053766 Quercus lobata HOM05D004605 ORTHO05D005804 5.8e-55 218.4 142 66.9
Dinv33862 Davidia involucrata HOM05D004605 ORTHO05D005804 1.3e-54 217.2 144 71.5
AagrBONN_evm.TU.Sc2ySwM_340.409 Anthoceros agrestis HOM05D004605 ORTHO05D005804 3.2e-53 212.6 195 50.3
FAN02G1482 Fragaria x ananassa HOM05D004605 ORTHO05D005804 3.2e-53 212.6 210 51.0
SalBow3G1842 Salvia bowleyana HOM05D004605 ORTHO05D005804 2.7e-52 209.5 199 53.3
Cre12.g553700 Chlamydomonas reinhardtii HOM05D004605 ORTHO05D005804 2.3e-51 206.5 208 48.6
Eucgr.L00305 Eucalyptus grandis HOM05D004605 ORTHO05D005804 2.5e-50 203.0 126 70.6
AagrBONN_evm.TU.Sc2ySwM_340.410 Anthoceros agrestis HOM05D004605 ORTHO05D005804 8.1e-49 198.0 172 51.7
FAN09G1153 Fragaria x ananassa HOM05D004605 ORTHO05D005804 1.4e-48 197.2 237 47.3
FAN09G3310 Fragaria x ananassa HOM05D004605 ORTHO05D005804 6.0e-44 181.8 163 53.4
FAN05G1095 Fragaria x ananassa HOM05D004605 ORTHO05D005804 2.0e-39 166.8 204 43.6
Aqoxy3G03713 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 3.4e-39 166.0 110 70.0
CDE10G0487 Ceratophyllum demersum HOM05D004605 ORTHO05D005804 6.0e-36 155.2 110 62.7
PSO591G0315 Papaver somniferum HOM05D004605 ORTHO05D005804 1.4e-29 134.0 77 75.3
Cfa025436 Carpinus fangiana HOM05D004605 ORTHO05D005804 1.0e-27 127.9 204 34.8
Cc07_g04480 Coffea canephora HOM05D004605 ORTHO05D005804 1.9e-26 123.6 76 76.3
Pp3s30_530 Physcomitrium patens HOM05D004605 ORTHO05D005804 6.2e-25 118.6 209 36.4
HPP92_012204 Vanilla planifolia HOM05D004605 ORTHO05D005804 1.1e-24 117.9 138 45.7
MCO08G262 Micromonas commoda HOM05D004605 ORTHO05D005804 1.8e-24 117.1 232 31.5
Nn4g23522 Nelumbo nucifera HOM05D004605 ORTHO05D005804 6.4e-22 108.6 73 67.1
BolC3t14639H Brassica oleracea HOM05D004605 ORTHO05D005804 6.7e-19 98.6 68 63.2
QL02p036101 Quercus lobata HOM05D004605 ORTHO05D005804 2.5e-18 96.7 115 44.3
QL10p049039 Quercus lobata HOM05D004605 ORTHO05D005804 2.5e-18 96.7 115 44.3
Mapoly0107s0018 Marchantia polymorpha HOM05D004605 ORTHO05D005804 5.6e-18 95.5 210 29.0
CBR_g36839 Chara braunii HOM05D004605 ORTHO05D005804 7.4e-18 95.1 202 28.7
QL10p051328 Quercus lobata HOM05D004605 ORTHO05D005804 1.6e-17 94.0 115 42.6
Nn1g08579 Nelumbo nucifera HOM05D004605 ORTHO05D005804 2.6e-15 86.7 84 54.8
HPP92_012246 Vanilla planifolia HOM05D004605 ORTHO05D005804 1.3e-14 84.3 108 44.4
Cre12.g553650 Chlamydomonas reinhardtii HOM05D004605 ORTHO05D143570 6.5e-14 82.0 178 28.7
Nn1g08577 Nelumbo nucifera HOM05D004605 ORTHO05D005804 1.4e-13 80.9 58 60.3
SMO270G0021 Selaginella moellendorffii HOM05D004605 ORTHO05D005804 1.6e-12 77.4 210 25.7
Nn1g08580 Nelumbo nucifera HOM05D004605 ORTHO05D005804 7.9e-12 75.1 56 62.5
HanXRQChr04g0116811 Helianthus annuus HOM05D004605 ORTHO05D005804 3.3e-10 69.7 40 77.5
BcaC01g05772 Brassica carinata HOM05D004605 ORTHO05D032242 6.3e-09 65.5 82 42.7
Cre10.g464500 Chlamydomonas reinhardtii HOM05D004605 ORTHO05D005804 1.1e-08 64.7 220 22.3
BolC3t14636H Brassica oleracea HOM05D004605 ORTHO05D032242 1.8e-08 63.9 82 41.5
arahy.Tifrunner.gnm1.ann1.2EY802 Arachis hypogaea HOM05D004605 ORTHO05D005804 1.2e-07 61.2 47 53.2
SGA_v2.0_scaffold226G43143 Striga asiatica HOM05D000344 ORTHO05D000934 5.0e-06 55.8 46 56.5


User provided reference genes

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