Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold148G36403 Striga asiatica HOM05D002734 ORTHO05D399141 2.9e-96 355.1 171 100.0
MSTRG.3355 Avicennia marina HOM05D002734 ORTHO05D003035 1.5e-12 77.0 41 78.0
Migut.K01276 Erythranthe guttata HOM05D002734 ORTHO05D003035 4.5e-12 75.5 41 75.6
SalBow1G8358 Salvia bowleyana HOM05D002734 ORTHO05D003035 6.5e-11 71.6 51 62.7
unitig_747.g21846 Utricularia gibba HOM05D005508 ORTHO05D006882 6.5e-11 71.6 41 75.6
Oeu022232.1 Olea europaea HOM05D002734 ORTHO05D003035 3.0e-08 62.8 41 63.4
QL02p067683 Quercus lobata HOM05D002734 ORTHO05D003035 3.0e-08 62.8 41 63.4
Thecc.04G095100 Theobroma cacao HOM05D002734 ORTHO05D003035 3.9e-08 62.4 41 68.3
QL02p067695 Quercus lobata HOM05D002734 ORTHO05D003035 5.1e-08 62.0 41 68.3
Hma1.2p1_0481F.1_g162120 Hydrangea macrophylla HOM05D002734 ORTHO05D003035 6.7e-08 61.6 41 68.3
Atru.chr11.1632 Acer truncatum HOM05D002734 ORTHO05D003035 8.7e-08 61.2 41 63.4
Duzib147G1402 Durio zibethinus HOM05D002734 ORTHO05D003035 8.7e-08 61.2 41 63.4
HPP92_023633 Vanilla planifolia HOM05D002734 ORTHO05D003035 8.7e-08 61.2 41 63.4
Cfa007660 Carpinus fangiana HOM05D002734 ORTHO05D003035 1.1e-07 60.8 41 63.4
Cc00_g13210 Coffea canephora HOM05D002734 ORTHO05D003035 1.1e-07 60.8 41 65.9
Cc11_g03940 Coffea canephora HOM05D002734 ORTHO05D003035 1.1e-07 60.8 41 65.9
CiPaw.05G125700 Carya illinoinensis HOM05D002734 ORTHO05D003035 1.5e-07 60.5 41 68.3
Prupe.3G255300 Prunus persica HOM05D002734 ORTHO05D003035 1.5e-07 60.5 41 65.9
Gohir.D09G008900 Gossypium hirsutum HOM05D002734 ORTHO05D003035 1.9e-07 60.1 41 63.4
Gorai.006G010600 Gossypium raimondii HOM05D002734 ORTHO05D003035 1.9e-07 60.1 41 63.4
TWI34G1877 Tripterygium wilfordii HOM05D002734 ORTHO05D003035 1.9e-07 60.1 41 63.4
CiPaw.03G088900 Carya illinoinensis HOM05D002734 ORTHO05D003035 2.5e-07 59.7 41 61.0
MD17G1059200 Malus domestica HOM05D002734 ORTHO05D003035 2.5e-07 59.7 41 61.0
CAN.G616.37 Capsicum annuum HOM05D002734 ORTHO05D003035 3.3e-07 59.3 41 61.0
Dinv34945 Davidia involucrata HOM05D005508 ORTHO05D006882 3.3e-07 59.3 41 65.9
Duzib187G0034 Durio zibethinus HOM05D002734 ORTHO05D003035 3.3e-07 59.3 41 61.0
COL.COLO4_07024 Corchorus olitorius HOM05D005508 ORTHO05D006882 4.3e-07 58.9 41 61.0
Duzib264G0486 Durio zibethinus HOM05D002734 ORTHO05D003035 4.3e-07 58.9 41 61.0
Nitab4.5_0004171g0010 Nicotiana tabacum HOM05D002734 ORTHO05D003035 4.3e-07 58.9 41 61.0
Peaxi162Scf00175g00016 Petunia axillaris HOM05D002734 ORTHO05D003035 4.3e-07 58.9 41 61.0
Nn4g23418 Nelumbo nucifera HOM05D002734 ORTHO05D003035 5.7e-07 58.5 41 65.9
TWI31G1102 Tripterygium wilfordii HOM05D002734 ORTHO05D003035 5.7e-07 58.5 41 58.5
TAR629G0108 Trochodendron aralioides HOM05D002734 ORTHO05D003035 5.7e-07 58.5 41 65.9
Cc07_g04180 Coffea canephora HOM05D002734 ORTHO05D003035 7.4e-07 58.2 41 61.0
Gohir.A09G009800 Gossypium hirsutum HOM05D002734 ORTHO05D003035 7.4e-07 58.2 41 61.0
Dinv34073 Davidia involucrata HOM05D002734 ORTHO05D003035 9.7e-07 57.8 41 63.4
Duzib251G0235 Durio zibethinus HOM05D002734 ORTHO05D003035 9.7e-07 57.8 41 61.0
TAR371G0205 Trochodendron aralioides HOM05D002734 ORTHO05D003035 9.7e-07 57.8 41 65.9
CANSAT64G2642 Cannabis sativa HOM05D002734 ORTHO05D003035 1.3e-06 57.4 41 61.0
Nitab4.5_0000231g0370 Nicotiana tabacum HOM05D002734 ORTHO05D003035 1.3e-06 57.4 41 58.5
PSO017G4100 Papaver somniferum HOM05D002734 ORTHO05D003035 1.3e-06 57.4 41 58.5
Prupe.1G286400 Prunus persica HOM05D002734 ORTHO05D003035 1.3e-06 57.4 41 61.0
Solyc05g012350.4 Solanum lycopersicum HOM05D002734 ORTHO05D003035 1.3e-06 57.4 41 58.5
Sopen05g007180 Solanum pennellii HOM05D002734 ORTHO05D003035 1.3e-06 57.4 41 58.5
MBI16_g05777_MAGBIO Magnolia biondii HOM05D002734 ORTHO05D003035 1.6e-06 57.0 41 65.9
MD17G1058900 Malus domestica HOM05D002734 ORTHO05D003035 1.6e-06 57.0 41 58.5
MD17G1059300 Malus domestica HOM05D002734 ORTHO05D003035 1.6e-06 57.0 41 58.5
Manes.01G095700 Manihot esculenta HOM05D002734 ORTHO05D003035 1.6e-06 57.0 41 58.5
Rhsim10G0042700 Rhododendron simsii HOM05D002734 ORTHO05D003035 1.6e-06 57.0 41 61.0
TAR629G3004 Trochodendron aralioides HOM05D002734 ORTHO05D003035 1.6e-06 57.0 41 63.4
GSVIVG01012213001 Vitis vinifera HOM05D002734 ORTHO05D003035 1.6e-06 57.0 41 61.0
Ca_18801_v3 Cicer arietinum L. HOM05D002734 ORTHO05D003035 2.2e-06 56.6 41 63.4
Medtr4g083080 Medicago truncatula HOM05D002734 ORTHO05D003035 2.2e-06 56.6 41 63.4
Nn3g17436 Nelumbo nucifera HOM05D002734 ORTHO05D003035 2.2e-06 56.6 41 61.0
Phvul.002G102200 Phaseolus vulgaris HOM05D002734 ORTHO05D003035 2.2e-06 56.6 41 63.4
Actinidia32303 Actinidia chinensis HOM05D002734 ORTHO05D003035 2.8e-06 56.2 41 61.0
CSS0022215 Camellia sinensis var. sinensis HOM05D002734 ORTHO05D003035 2.8e-06 56.2 41 61.0
Cpa.g.sc14.170 Carica papaya HOM05D002734 ORTHO05D003035 2.8e-06 56.2 41 58.5
Thecc.02G331900 Theobroma cacao HOM05D002734 ORTHO05D003035 2.8e-06 56.2 41 61.0
arahy.Tifrunner.gnm1.ann1.CVB38J Arachis hypogaea HOM05D002734 ORTHO05D003035 3.7e-06 55.8 41 61.0
QL03p071875 Quercus lobata HOM05D002734 ORTHO05D003035 3.7e-06 55.8 41 61.0
QL03p071987 Quercus lobata HOM05D002734 ORTHO05D003035 3.7e-06 55.8 41 61.0
CSS0005163 Camellia sinensis var. sinensis HOM05D002734 ORTHO05D003035 4.8e-06 55.5 41 61.0
Hma1.2p1_0364F.1_g136670 Hydrangea macrophylla HOM05D002734 ORTHO05D003035 4.8e-06 55.5 41 58.5
Hma1.2p1_1826F.1_g304430 Hydrangea macrophylla HOM05D002734 ORTHO05D003035 4.8e-06 55.5 41 58.5
Hma1.2p1_1826F.1_g304436 Hydrangea macrophylla HOM05D002734 ORTHO05D003035 4.8e-06 55.5 41 58.5
Manes.01G028200 Manihot esculenta HOM05D002734 ORTHO05D003035 4.8e-06 55.5 41 61.0
vmacro05631 Vaccinium macrocarpon HOM05D002734 ORTHO05D003035 4.8e-06 55.5 41 58.5
CAN.G616.36 Capsicum annuum HOM05D002734 ORTHO05D003035 6.3e-06 55.1 41 56.1
Glyma.20G025700 Glycine max HOM05D002734 ORTHO05D003035 6.3e-06 55.1 41 58.5
MD09G1066200 Malus domestica HOM05D002734 ORTHO05D003035 6.3e-06 55.1 41 56.1
Oeu017533.3 Olea europaea HOM05D002734 ORTHO05D003035 6.3e-06 55.1 41 61.0
PSO017G0004 Papaver somniferum HOM05D002734 ORTHO05D003035 6.3e-06 55.1 41 56.1
PSO017G6994 Papaver somniferum HOM05D002734 ORTHO05D003035 6.3e-06 55.1 41 58.5
Psat7g133640 Pisum sativum HOM05D002734 ORTHO05D003035 6.3e-06 55.1 41 61.0
Potri.004G120000 Populus trichocarpa HOM05D002734 ORTHO05D003035 6.3e-06 55.1 41 58.5
PGSC0003DMG401028319 Solanum tuberosum HOM05D002734 ORTHO05D003035 6.3e-06 55.1 41 56.1
TPR.G26448 Trifolium pratense HOM05D002734 ORTHO05D003035 6.3e-06 55.1 41 61.0
VMungo0251G3207 Vigna mungo HOM05D002734 ORTHO05D003035 6.3e-06 55.1 41 61.0
Aqoxy3G03629 Aquilegia oxysepala HOM05D002734 ORTHO05D003035 8.2e-06 54.7 41 61.0
arahy.Tifrunner.gnm1.ann1.T9Q985 Arachis hypogaea HOM05D002734 ORTHO05D003035 8.2e-06 54.7 45 57.8
COL.COLO4_27892 Corchorus olitorius HOM05D002734 ORTHO05D003035 8.2e-06 54.7 41 58.5
CsaV3_6G033640 Cucumis sativus L. HOM05D002734 ORTHO05D003035 8.2e-06 54.7 41 58.5
FvH4_6g46920 Fragaria vesca HOM05D002734 ORTHO05D003035 8.2e-06 54.7 41 58.5
FAN02G3808 Fragaria x ananassa HOM05D002734 ORTHO05D003035 8.2e-06 54.7 41 58.5
FAN05G1893 Fragaria x ananassa HOM05D002734 ORTHO05D003035 8.2e-06 54.7 41 58.5
FAN05G5830 Fragaria x ananassa HOM05D002734 ORTHO05D003035 8.2e-06 54.7 41 58.5
FAN09G2778 Fragaria x ananassa HOM05D002734 ORTHO05D003035 8.2e-06 54.7 41 58.5
FAN14G0350 Fragaria x ananassa HOM05D002734 ORTHO05D003035 8.2e-06 54.7 41 58.5
PSO478G0967 Papaver somniferum HOM05D002734 ORTHO05D003035 8.2e-06 54.7 41 58.5
RcHm_v2.0_Chr2g0165891 Rosa chinensis HOM05D002734 ORTHO05D003035 8.2e-06 54.7 41 58.5
Solyc05g012360.3 Solanum lycopersicum HOM05D002734 ORTHO05D003035 8.2e-06 54.7 35 62.9


User provided reference genes

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