Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1489G53965 Striga asiatica HOM05D003580 ORTHO05D004441 6.0e-129 464.2 230 100.0
SGA_v2.0_scaffold31G12889 Striga asiatica HOM05D003580 ORTHO05D004441 3.2e-122 441.8 239 93.7
SGA_v2.0_scaffold31G12887 Striga asiatica HOM05D003580 ORTHO05D004441 1.1e-90 337.0 242 76.9
Migut.J00662 Erythranthe guttata HOM05D003580 ORTHO05D004441 4.5e-76 288.5 207 69.6
MSTRG.19281 Avicennia marina HOM05D003580 ORTHO05D004441 2.2e-70 269.6 207 66.7
Actinidia22096 Actinidia chinensis HOM05D003580 ORTHO05D004441 8.0e-65 251.1 207 61.4
Actinidia30566 Actinidia chinensis HOM05D003580 ORTHO05D004441 1.4e-64 250.4 207 62.3
DCAR_019887 Daucus carota HOM05D003580 ORTHO05D004441 1.2e-63 247.3 228 56.6
unitig_749.g14304 Utricularia gibba HOM05D003580 ORTHO05D004441 1.3e-62 243.8 209 61.2
Oeu011931.1 Olea europaea HOM05D003580 ORTHO05D004441 1.7e-62 243.4 203 61.1
GSVIVG01006267001 Vitis vinifera HOM05D003580 ORTHO05D004441 1.1e-61 240.7 227 56.4
CiPaw.04G180400 Carya illinoinensis HOM05D003580 ORTHO05D004441 1.4e-61 240.4 202 61.4
Oeu055491.1 Olea europaea HOM05D003580 ORTHO05D004441 1.8e-61 240.0 203 62.1
FAN04G1111 Fragaria x ananassa HOM05D003580 ORTHO05D004441 2.4e-61 239.6 201 61.2
FAN18G2191 Fragaria x ananassa HOM05D003580 ORTHO05D004441 2.4e-61 239.6 201 61.7
FAN13G3018 Fragaria x ananassa HOM05D003580 ORTHO05D004441 4.1e-61 238.8 201 61.2
RcHm_v2.0_Chr7g0220971 Rosa chinensis HOM05D003580 ORTHO05D004441 9.2e-61 237.7 201 62.2
Thecc.05G131900 Theobroma cacao HOM05D003580 ORTHO05D004441 9.2e-61 237.7 228 54.8
Atru.chr10.124 Acer truncatum HOM05D003580 ORTHO05D004441 2.0e-60 236.5 227 57.3
FAN08G0025 Fragaria x ananassa HOM05D003580 ORTHO05D004441 2.0e-60 236.5 201 60.7
QL01p005312 Quercus lobata HOM05D003580 ORTHO05D004441 2.7e-60 236.1 202 59.9
Potri.010G177200 Populus trichocarpa HOM05D003580 ORTHO05D004441 7.8e-60 234.6 202 58.4
Dinv20243 Davidia involucrata HOM05D003580 ORTHO05D004441 1.0e-59 234.2 207 58.9
Atru.chr10.106 Acer truncatum HOM05D003580 ORTHO05D004441 1.7e-59 233.4 227 56.8
TAR362G0544 Trochodendron aralioides HOM05D003580 ORTHO05D004441 2.3e-59 233.0 224 55.8
TAR633G0565 Trochodendron aralioides HOM05D003580 ORTHO05D004441 2.9e-59 232.6 227 55.9
Duzib140G0001 Durio zibethinus HOM05D003580 ORTHO05D004441 3.9e-59 232.3 227 52.9
CAN.G438.18 Capsicum annuum HOM05D003580 ORTHO05D004441 5.0e-59 231.9 204 57.8
Cfa002307 Carpinus fangiana HOM05D003580 ORTHO05D004441 5.0e-59 231.9 202 58.9
Prupe.1G575000 Prunus persica HOM05D003580 ORTHO05D004441 5.0e-59 231.9 212 58.0
Peaxi162Scf00076g00824 Petunia axillaris HOM05D003580 ORTHO05D004441 8.6e-59 231.1 204 57.4
Nitab4.5_0000001g0420 Nicotiana tabacum HOM05D003580 ORTHO05D004441 1.5e-58 230.3 204 56.4
Sabra10G0136200 Salix brachista HOM05D003580 ORTHO05D004441 1.5e-58 230.3 201 59.2
Aa31LG11G13320 Aethionema arabicum HOM05D003580 ORTHO05D004441 1.9e-58 229.9 205 58.0
MD08G1237500 Malus domestica HOM05D003580 ORTHO05D004441 2.5e-58 229.6 205 59.0
Nitab4.5_0000693g0020 Nicotiana tabacum HOM05D003580 ORTHO05D004441 2.5e-58 229.6 204 55.4
Sopen03g039520 Solanum pennellii HOM05D003580 ORTHO05D004441 2.5e-58 229.6 204 57.4
Gohir.A04G049300 Gossypium hirsutum HOM05D003580 ORTHO05D004441 4.3e-58 228.8 226 52.7
Nn5g28173 Nelumbo nucifera HOM05D003580 ORTHO05D004441 4.3e-58 228.8 223 54.3
Potri.008G079700 Populus trichocarpa HOM05D003580 ORTHO05D004441 5.6e-58 228.4 224 54.0
THA.LOC104820933 Tarenaya hassleriana HOM05D003580 ORTHO05D004441 7.3e-58 228.0 207 57.0
Glyma.10G201900 Glycine max HOM05D003580 ORTHO05D004441 9.5e-58 227.6 205 59.5
CANSAT64G0454 Cannabis sativa HOM05D003580 ORTHO05D004441 1.2e-57 227.3 220 55.9
Dinv14590 Davidia involucrata HOM05D003580 ORTHO05D004441 1.2e-57 227.3 198 59.1
Gorai.009G355000 Gossypium raimondii HOM05D003580 ORTHO05D004441 1.2e-57 227.3 226 52.7
Solyc03g120700.3 Solanum lycopersicum HOM05D003580 ORTHO05D004441 1.6e-57 226.9 204 56.9
CARHR197010 Cardamine hirsuta HOM05D003580 ORTHO05D004441 2.1e-57 226.5 204 55.9
BraA03t10094Z Brassica rapa HOM05D003580 ORTHO05D004441 2.8e-57 226.1 205 57.1
HanXRQChr12g0356901 Helianthus annuus HOM05D003580 ORTHO05D004441 6.1e-57 224.9 225 54.2
Gohir.D05G331100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 8.0e-57 224.6 226 52.7
A03p07660 Brassica napus HOM05D003580 ORTHO05D004441 1.0e-56 224.2 205 56.1
BolC9t58909H Brassica oleracea HOM05D003580 ORTHO05D004441 1.0e-56 224.2 222 52.3
Carub.0006s1449 Capsella rubella HOM05D003580 ORTHO05D004441 1.0e-56 224.2 201 56.7
COL.COLO4_02821 Corchorus olitorius HOM05D003580 ORTHO05D004441 1.0e-56 224.2 260 48.5
ECA248G2481 Erigeron canadensis HOM05D003580 ORTHO05D004441 1.0e-56 224.2 225 53.3
MD15G1429400 Malus domestica HOM05D003580 ORTHO05D004441 1.0e-56 224.2 204 58.3
PGSC0003DMG400002624 Solanum tuberosum HOM05D003580 ORTHO05D004441 1.0e-56 224.2 204 55.9
Ciclev10014110m.g Citrus clementina HOM05D003580 ORTHO05D004441 1.4e-56 223.8 226 54.0
Sp6g27860 Schrenkiella parvula HOM05D003580 ORTHO05D004441 1.4e-56 223.8 204 54.9
TWI53G0960 Tripterygium wilfordii HOM05D003580 ORTHO05D004441 1.4e-56 223.8 211 55.9
C09p60740 Brassica napus HOM05D003580 ORTHO05D004441 1.8e-56 223.4 226 51.8
Thhalv10012518m.g Eutrema salsugineum HOM05D003580 ORTHO05D004441 2.3e-56 223.0 204 55.4
A10p22770 Brassica napus HOM05D003580 ORTHO05D004441 3.1e-56 222.6 226 51.8
BraA10t44342Z Brassica rapa HOM05D003580 ORTHO05D004441 3.1e-56 222.6 218 52.8
Hund21939 Selenicereus undatus HOM05D003580 ORTHO05D004441 3.1e-56 222.6 206 53.9
Lalb_Chr02g0151301 Lupinus albus HOM05D003580 ORTHO05D004441 4.0e-56 222.2 207 57.5
arahy.Tifrunner.gnm1.ann1.U0AKQE Arachis hypogaea HOM05D003580 ORTHO05D004441 5.2e-56 221.9 227 52.9
Gohir.D04G010100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 5.2e-56 221.9 227 52.0
Gorai.012G011900 Gossypium raimondii HOM05D003580 ORTHO05D004441 5.2e-56 221.9 227 52.0
AL6G27200 Arabidopsis lyrata HOM05D003580 ORTHO05D004441 6.8e-56 221.5 201 56.2
C03p08900 Brassica napus HOM05D003580 ORTHO05D004441 6.8e-56 221.5 205 56.1
BolC3t13385H Brassica oleracea HOM05D003580 ORTHO05D004441 6.8e-56 221.5 205 56.1
Glyma.20G188500 Glycine max HOM05D003580 ORTHO05D004441 6.8e-56 221.5 205 58.0
Lj5g0021899 Lotus japonicus HOM05D003580 ORTHO05D004441 6.8e-56 221.5 202 58.4
Lalb_Chr21g0313231 Lupinus albus HOM05D003580 ORTHO05D004441 6.8e-56 221.5 206 55.8
AT5G16300 Arabidopsis thaliana HOM05D003580 ORTHO05D004441 1.2e-55 220.7 201 55.7
Cc06_g21420 Coffea canephora HOM05D003580 ORTHO05D004441 1.5e-55 220.3 206 58.3
HanXRQChr01g0024861 Helianthus annuus HOM05D003580 ORTHO05D004441 1.5e-55 220.3 225 52.4
Phvul.007G105200 Phaseolus vulgaris HOM05D003580 ORTHO05D004441 1.5e-55 220.3 205 57.6
Psat6g176280 Pisum sativum HOM05D003580 ORTHO05D004441 1.5e-55 220.3 207 56.5
EL10Ac4g10045 Beta vulgaris HOM05D003580 ORTHO05D004441 2.0e-55 219.9 206 54.9
TPR.G2546 Trifolium pratense HOM05D003580 ORTHO05D004441 2.0e-55 219.9 207 56.5
CsaV3_2G009280 Cucumis sativus L. HOM05D003580 ORTHO05D004441 2.6e-55 219.5 205 55.6
VMungo0720G1645 Vigna mungo HOM05D003580 ORTHO05D004441 2.6e-55 219.5 205 57.6
Aqoxy6G00271 Aquilegia oxysepala HOM05D003580 ORTHO05D004441 3.4e-55 219.2 224 50.9
arahy.Tifrunner.gnm1.ann1.TPGZ8P Arachis hypogaea HOM05D003580 ORTHO05D004441 3.4e-55 219.2 227 52.9
Gohir.A05G405500 Gossypium hirsutum HOM05D003580 ORTHO05D004441 3.4e-55 219.2 224 51.8
MELO3C008782.2 Cucumis melo HOM05D003580 ORTHO05D004441 5.8e-55 218.4 205 55.1
Manes.13G155600 Manihot esculenta HOM05D003580 ORTHO05D004441 7.5e-55 218.0 202 55.0
Sabra08G0059400 Salix brachista HOM05D003580 ORTHO05D004441 9.8e-55 217.6 227 50.7
Eucgr.G00871 Eucalyptus grandis HOM05D003580 ORTHO05D004441 1.3e-54 217.2 204 58.8
BcaB01g04993 Brassica carinata HOM05D003580 ORTHO05D004441 1.7e-54 216.9 205 55.6
Ca_10488_v3 Cicer arietinum L. HOM05D003580 ORTHO05D004441 1.7e-54 216.9 207 55.6
Nn1g09424 Nelumbo nucifera HOM05D003580 ORTHO05D004441 1.7e-54 216.9 200 56.0
PSO063G3475 Papaver somniferum HOM05D003580 ORTHO05D004441 4.9e-54 215.3 203 55.7
PSO675G0774 Papaver somniferum HOM05D003580 ORTHO05D004441 4.9e-54 215.3 206 54.4
PSO732G0238 Papaver somniferum HOM05D003580 ORTHO05D004441 6.4e-54 214.9 206 53.9
PGR042G2902 Punica granatum HOM05D003580 ORTHO05D004441 1.9e-53 213.4 202 55.4
ClCG11G011150 Citrullus lanatus HOM05D003580 ORTHO05D004441 2.4e-53 213.0 205 54.1
Lj2A356T45 Lonicera japonica HOM05D003580 ORTHO05D004441 3.2e-53 212.6 218 55.5
AUR62006600 Chenopodium quinoa HOM05D003580 ORTHO05D004441 1.2e-52 210.7 206 54.4
Haze_24513 Corylus avellana HOM05D003580 ORTHO05D004441 1.2e-52 210.7 249 48.2
AUR62000253 Chenopodium quinoa HOM05D003580 ORTHO05D004441 2.0e-52 209.9 206 54.4
Sed0017385 Sechium edule HOM05D003580 ORTHO05D004441 2.7e-52 209.5 205 52.2
Sed0022441 Sechium edule HOM05D003580 ORTHO05D004441 6.0e-52 208.4 205 52.7
Ah.04g159420 Amaranthus hybridus HOM05D003580 ORTHO05D004441 6.6e-51 204.9 189 56.6
CDE04G2219 Ceratophyllum demersum HOM05D003580 ORTHO05D004441 1.1e-50 204.1 209 52.6
MBI18_g04901_MAGBIO Magnolia biondii HOM05D003580 ORTHO05D004441 3.3e-50 202.6 212 51.9
CDE02G3888 Ceratophyllum demersum HOM05D003580 ORTHO05D004441 4.7e-49 198.7 207 51.2
Lsat_1_v5_gn_1_58860 Lactuca sativa HOM05D003580 ORTHO05D004441 8.0e-49 198.0 229 49.3
vmacro09152 Vaccinium macrocarpon HOM05D003580 ORTHO05D004441 5.2e-48 195.3 361 37.4
ATR0743G251 Amborella trichopoda HOM05D003580 ORTHO05D004441 2.6e-47 193.0 213 47.9
CSS0030366 Camellia sinensis var. sinensis HOM05D003580 ORTHO05D004441 3.4e-47 192.6 159 63.5
Cpa.g.sc272.6 Carica papaya HOM05D003580 ORTHO05D004441 7.5e-47 191.4 138 64.5
HPP92_017521 Vanilla planifolia HOM05D003580 ORTHO05D004441 7.5e-47 191.4 206 50.5
FvH4_5g28760 Fragaria vesca HOM05D003580 ORTHO05D004441 1.1e-45 187.6 149 63.1
Os01g0777000 Oryza sativa ssp. japonica HOM05D003580 ORTHO05D004441 1.4e-45 187.2 213 50.2
Rhsim04G0086300 Rhododendron simsii HOM05D003580 ORTHO05D004441 3.2e-45 186.0 243 45.7
Medtr1g492710 Medicago truncatula HOM05D003580 ORTHO05D004441 1.2e-44 184.1 153 61.4
Zm00001eb151630 Zea mays HOM05D003580 ORTHO05D004441 1.2e-44 184.1 215 48.8
Zm00001eb369950 Zea mays HOM05D003580 ORTHO05D004441 2.7e-44 183.0 216 47.7
SEGI_02361 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 9.5e-42 174.5 212 46.2
arahy.Tifrunner.gnm1.ann1.G7UC7Z Arachis hypogaea HOM05D003580 ORTHO05D004441 3.1e-40 169.5 146 59.6
arahy.Tifrunner.gnm1.ann1.0G6L2R Arachis hypogaea HOM05D003580 ORTHO05D004441 8.9e-40 167.9 146 58.9
QL01p051611 Quercus lobata HOM05D003580 ORTHO05D004441 8.3e-38 161.4 110 67.3
SHI02481 Sapria himalayana HOM05D003580 ORTHO05D004441 3.2e-37 159.5 204 45.6
BcaNung02234 Brassica carinata HOM05D003580 ORTHO05D004441 9.5e-34 147.9 204 43.1
SEGI_21118 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.4e-32 143.3 181 46.4
SGA_v2.0_scaffold13G06689 Striga asiatica HOM05D003580 ORTHO05D004441 7.6e-31 138.3 93 78.5
Mapoly0006s0304 Marchantia polymorpha HOM05D003580 ORTHO05D004441 4.9e-30 135.6 213 38.0
AagrBONN_evm.TU.Sc2ySwM_228.612 Anthoceros agrestis HOM05D003580 ORTHO05D004441 5.1e-27 125.6 175 41.1
BcaB04g17891 Brassica carinata HOM05D003580 ORTHO05D004441 2.5e-26 123.2 113 54.0
Pp3c21_18130 Physcomitrium patens HOM05D003580 ORTHO05D004441 1.3e-25 120.9 228 36.4
Pp3c18_6580 Physcomitrium patens HOM05D003580 ORTHO05D004441 2.1e-25 120.2 158 43.7
Pp3c22_14630 Physcomitrium patens HOM05D003580 ORTHO05D004441 3.1e-24 116.3 204 35.8
SMO116G0219 Selaginella moellendorffii HOM05D003580 ORTHO05D004441 4.0e-24 115.9 144 43.8
CBR_g38824 Chara braunii HOM05D003580 ORTHO05D000002 4.9e-22 109.0 204 34.3
MCO16G457 Micromonas commoda HOM05D003580 ORTHO05D004441 4.3e-18 95.9 204 32.8
PSO063G6607 Papaver somniferum HOM05D003580 ORTHO05D004441 4.6e-12 75.9 89 47.2
QL01p051624 Quercus lobata HOM05D003580 ORTHO05D004441 5.1e-11 72.4 91 48.4
Sc16g0010760 Simmondsia chinensis HOM05D003580 ORTHO05D004441 1.1e-10 71.2 93 43.0
Cre14.g628050 Chlamydomonas reinhardtii HOM05D003580 ORTHO05D004441 1.4e-08 64.3 186 26.9


User provided reference genes

Program Settings