Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1484G53963 Striga asiatica HOM05D003867 ORTHO05D004593 4.9e-260 900.6 452 100.0
SGA_v2.0_scaffold63G21760 Striga asiatica HOM05D003867 ORTHO05D004593 2.1e-226 788.9 400 99.2
SGA_v2.0_scaffold347G49568 Striga asiatica HOM05D003867 ORTHO05D004593 4.7e-226 787.7 400 99.0
Migut.E00031 Erythranthe guttata HOM05D003867 ORTHO05D004593 6.6e-196 687.6 369 91.3
MSTRG.7988 Avicennia marina HOM05D003867 ORTHO05D004593 3.3e-195 685.3 369 91.3
Oeu020305.1 Olea europaea HOM05D003867 ORTHO05D004593 4.3e-195 684.9 369 91.9
COL.COLO4_12823 Corchorus olitorius HOM05D003867 ORTHO05D004593 9.5e-195 683.7 372 88.7
DCAR_007011 Daucus carota HOM05D003867 ORTHO05D004593 1.2e-194 683.3 369 90.5
DCAR_031187 Daucus carota HOM05D003867 ORTHO05D004593 1.6e-194 682.9 372 89.5
Gohir.D12G152000 Gossypium hirsutum HOM05D003867 ORTHO05D004593 2.8e-194 682.2 369 89.2
Gorai.001G109800 Gossypium raimondii HOM05D003867 ORTHO05D004593 3.6e-194 681.8 369 89.2
HanXRQChr09g0255191 Helianthus annuus HOM05D003867 ORTHO05D004593 3.6e-194 681.8 369 89.7
Duzib251G0884 Durio zibethinus HOM05D003867 ORTHO05D004593 4.7e-194 681.4 369 89.2
Gorai.008G164400 Gossypium raimondii HOM05D003867 ORTHO05D004593 6.2e-194 681.0 368 89.4
Gohir.A12G147700 Gossypium hirsutum HOM05D003867 ORTHO05D004593 8.0e-194 680.6 369 87.5
Manes.12G014300 Manihot esculenta HOM05D003867 ORTHO05D004593 1.8e-193 679.5 369 88.6
Cc11_g16710 Coffea canephora HOM05D003867 ORTHO05D004593 2.3e-193 679.1 369 90.0
Thecc.02G275800 Theobroma cacao HOM05D003867 ORTHO05D004593 2.3e-193 679.1 369 89.7
HanXRQChr15g0486841 Helianthus annuus HOM05D003867 ORTHO05D004593 4.0e-193 678.3 369 88.9
Sp6g34370 Schrenkiella parvula HOM05D003867 ORTHO05D004593 4.0e-193 678.3 371 90.3
Nitab4.5_0000271g0190 Nicotiana tabacum HOM05D003867 ORTHO05D004593 6.8e-193 677.6 370 88.9
arahy.Tifrunner.gnm1.ann1.VZW0IR Arachis hypogaea HOM05D003867 ORTHO05D004593 8.9e-193 677.2 368 89.1
Duzib268G1394 Durio zibethinus HOM05D003867 ORTHO05D004593 1.2e-192 676.8 369 89.2
Gohir.D07G101900 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.5e-192 676.4 369 88.3
CAN.G206.61 Capsicum annuum HOM05D003867 ORTHO05D004593 2.0e-192 676.0 368 89.7
Haze_12379 Corylus avellana HOM05D003867 ORTHO05D004593 2.0e-192 676.0 367 89.9
Peaxi162Scf00128g01017 Petunia axillaris HOM05D003867 ORTHO05D004593 2.6e-192 675.6 368 89.7
Lalb_Chr03g0037281 Lupinus albus HOM05D003867 ORTHO05D004593 3.4e-192 675.2 366 88.8
Nn3g16522 Nelumbo nucifera HOM05D003867 ORTHO05D004593 3.4e-192 675.2 369 89.7
Oeu019042.1 Olea europaea HOM05D003867 ORTHO05D004593 3.4e-192 675.2 369 90.2
Solyc02g087240.4 Solanum lycopersicum HOM05D003867 ORTHO05D004593 3.4e-192 675.2 369 88.9
Sopen02g031980 Solanum pennellii HOM05D003867 ORTHO05D004593 3.4e-192 675.2 369 88.9
ECA232G3717 Erigeron canadensis HOM05D003867 ORTHO05D004593 4.4e-192 674.9 366 89.6
A10p28200 Brassica napus HOM05D003867 ORTHO05D004593 5.8e-192 674.5 369 90.0
BraA10t44869Z Brassica rapa HOM05D003867 ORTHO05D004593 7.5e-192 674.1 368 90.2
Gohir.A07G097600 Gossypium hirsutum HOM05D003867 ORTHO05D004593 7.5e-192 674.1 369 87.3
Potri.010G057400 Populus trichocarpa HOM05D003867 ORTHO05D004593 7.5e-192 674.1 368 88.6
BolC9t59588H Brassica oleracea HOM05D003867 ORTHO05D004593 9.8e-192 673.7 368 90.2
Thhalv10013394m.g Eutrema salsugineum HOM05D003867 ORTHO05D004593 9.8e-192 673.7 369 90.0
MBI11_g06772_MAGBIO Magnolia biondii HOM05D003867 ORTHO05D004593 9.8e-192 673.7 369 87.8
Nn4g22382 Nelumbo nucifera HOM05D003867 ORTHO05D004593 9.8e-192 673.7 369 89.4
RcHm_v2.0_Chr4g0430891 Rosa chinensis HOM05D003867 ORTHO05D004593 9.8e-192 673.7 369 91.1
PGSC0003DMG400001292 Solanum tuberosum HOM05D003867 ORTHO05D004593 9.8e-192 673.7 369 88.6
Carub.0006s0748 Capsella rubella HOM05D003867 ORTHO05D004593 1.3e-191 673.3 369 89.7
Sabra10G0047900 Salix brachista HOM05D003867 ORTHO05D004593 1.7e-191 672.9 367 88.8
AT5G08530 Arabidopsis thaliana HOM05D003867 ORTHO05D004593 2.9e-191 672.2 369 89.7
CSS0021164 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 2.9e-191 672.2 369 87.0
PSO063G4816 Papaver somniferum HOM05D003867 ORTHO05D004593 2.9e-191 672.2 369 90.5
TWI36G0688 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 2.9e-191 672.2 368 88.9
C03p04400 Brassica napus HOM05D003867 ORTHO05D004593 3.7e-191 671.8 369 90.0
Prupe.1G231900 Prunus persica HOM05D003867 ORTHO05D004593 3.7e-191 671.8 369 90.0
TPR.G25178 Trifolium pratense HOM05D003867 ORTHO05D004593 4.9e-191 671.4 366 87.7
Actinidia08082 Actinidia chinensis HOM05D003867 ORTHO05D004593 6.4e-191 671.0 369 86.7
CiPaw.05G113400 Carya illinoinensis HOM05D003867 ORTHO05D004593 6.4e-191 671.0 369 87.8
Aa31LG3G18010 Aethionema arabicum HOM05D003867 ORTHO05D004593 8.3e-191 670.6 369 88.6
CARHR204460 Cardamine hirsuta HOM05D003867 ORTHO05D004593 8.3e-191 670.6 369 89.4
AL6G19230 Arabidopsis lyrata HOM05D003867 ORTHO05D004593 1.1e-190 670.2 369 89.7
PSO782G1516 Papaver somniferum HOM05D003867 ORTHO05D004593 1.1e-190 670.2 369 90.5
Peaxi162Scf00449g00825 Petunia axillaris HOM05D003867 ORTHO05D004593 1.1e-190 670.2 367 88.3
Aqoxy3G01483 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 1.4e-190 669.8 366 90.2
EL10Ac6g13463 Beta vulgaris HOM05D003867 ORTHO05D004593 1.4e-190 669.8 373 88.5
BcaB01g05588 Brassica carinata HOM05D003867 ORTHO05D004593 1.4e-190 669.8 369 89.4
Duzib248G0225 Durio zibethinus HOM05D003867 ORTHO05D004593 1.4e-190 669.8 369 88.1
FvH4_4g24110 Fragaria vesca HOM05D003867 ORTHO05D004593 1.4e-190 669.8 369 90.2
THA.LOC104819362 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 1.9e-190 669.5 369 89.2
BcaB08g37249 Brassica carinata HOM05D003867 ORTHO05D004593 2.4e-190 669.1 369 89.7
C09p68410 Brassica napus HOM05D003867 ORTHO05D004593 2.4e-190 669.1 371 89.8
MD13G1115400 Malus domestica HOM05D003867 ORTHO05D004593 2.4e-190 669.1 369 88.9
Medtr1g042300 Medicago truncatula HOM05D003867 ORTHO05D004593 2.4e-190 669.1 365 87.7
Ca_12000_v3 Cicer arietinum L. HOM05D003867 ORTHO05D004593 4.1e-190 668.3 365 87.7
CDE09G0709 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 9.2e-190 667.2 369 88.3
CSS0008021 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 1.2e-189 666.8 369 85.9
Lalb_Chr01g0021001 Lupinus albus HOM05D003867 ORTHO05D004593 1.2e-189 666.8 366 87.7
A03p03890 Brassica napus HOM05D003867 ORTHO05D004593 1.6e-189 666.4 370 87.8
MD16G1115300 Malus domestica HOM05D003867 ORTHO05D004593 1.6e-189 666.4 369 89.4
Sc04g0010000 Simmondsia chinensis HOM05D003867 ORTHO05D004593 1.6e-189 666.4 369 88.1
THA.LOC104818400 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 1.6e-189 666.4 369 89.7
Zm00001eb329270 Zea mays HOM05D003867 ORTHO05D004593 1.6e-189 666.4 370 91.1
Ah.03g133960 Amaranthus hybridus HOM05D003867 ORTHO05D004593 2.0e-189 666.0 367 88.3
Hund06074 Selenicereus undatus HOM05D003867 ORTHO05D004593 2.0e-189 666.0 372 86.8
Hund25446 Selenicereus undatus HOM05D003867 ORTHO05D004593 2.0e-189 666.0 368 87.2
TAR374G1237 Trochodendron aralioides HOM05D003867 ORTHO05D004593 2.0e-189 666.0 369 88.1
BolC3t12971H Brassica oleracea HOM05D003867 ORTHO05D004593 2.7e-189 665.6 366 89.6
QL03p054504 Quercus lobata HOM05D003867 ORTHO05D004593 2.7e-189 665.6 369 88.1
Sed0026140 Sechium edule HOM05D003867 ORTHO05D004593 2.7e-189 665.6 369 88.3
CANSAT64G1093 Cannabis sativa HOM05D003867 ORTHO05D004593 4.6e-189 664.8 366 87.4
TWI75G1178 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 4.6e-189 664.8 368 85.9
ATR0564G372 Amborella trichopoda HOM05D003867 ORTHO05D004593 1.0e-188 663.7 366 87.7
MELO3C009702.2 Cucumis melo HOM05D003867 ORTHO05D004593 1.0e-188 663.7 369 86.7
CsaV3_3G039600 Cucumis sativus L. HOM05D003867 ORTHO05D004593 1.0e-188 663.7 369 87.0
Lsat_1_v5_gn_4_184020 Lactuca sativa HOM05D003867 ORTHO05D004593 1.0e-188 663.7 368 89.9
BraA03t09737Z Brassica rapa HOM05D003867 ORTHO05D004593 1.7e-188 662.9 369 90.2
Cpa.g.sc257.6 Carica papaya HOM05D003867 ORTHO05D004593 2.3e-188 662.5 369 86.7
Lj6g0022289 Lotus japonicus HOM05D003867 ORTHO05D004593 2.3e-188 662.5 365 88.5
Glyma.02G003300 Glycine max HOM05D003867 ORTHO05D004593 3.0e-188 662.1 365 88.5
Psat6g040120 Pisum sativum HOM05D003867 ORTHO05D004593 3.0e-188 662.1 366 87.2
vmacro15114 Vaccinium macrocarpon HOM05D003867 ORTHO05D004593 3.9e-188 661.8 369 85.9
Glyma.10G005500 Glycine max HOM05D003867 ORTHO05D004593 8.6e-188 660.6 365 87.4
Zm00001eb110430 Zea mays HOM05D003867 ORTHO05D004593 1.1e-187 660.2 344 94.2
Rhsim12G0153900 Rhododendron simsii HOM05D003867 ORTHO05D004593 1.5e-187 659.8 369 85.6
Os07g0645400 Oryza sativa ssp. japonica HOM05D003867 ORTHO05D004593 2.5e-187 659.1 344 93.3
Dinv39063 Davidia involucrata HOM05D003867 ORTHO05D004593 5.6e-187 657.9 374 84.2
PGR119G1061 Punica granatum HOM05D003867 ORTHO05D004593 5.6e-187 657.9 374 86.4
VMungo0720G1468 Vigna mungo HOM05D003867 ORTHO05D004593 3.6e-186 655.2 375 89.3
Phvul.007G274700 Phaseolus vulgaris HOM05D003867 ORTHO05D004593 4.7e-186 654.8 366 88.8
Eucgr.H04659 Eucalyptus grandis HOM05D003867 ORTHO05D004593 6.2e-186 654.4 369 87.3
ATR0665G595 Amborella trichopoda HOM05D003867 ORTHO05D004593 8.1e-186 654.1 366 86.6
ClCG02G006860 Citrullus lanatus HOM05D003867 ORTHO05D004593 1.8e-185 652.9 319 94.7
Ciclev10033600m.g Citrus clementina HOM05D003867 ORTHO05D004593 6.8e-185 651.0 319 94.0
Rhsim12G0103900 Rhododendron simsii HOM05D003867 ORTHO05D004593 8.9e-185 650.6 356 87.4
Pp3c12_4050 Physcomitrium patens HOM05D003867 ORTHO05D004593 4.9e-183 644.8 364 86.3
SMO141G0212 Selaginella moellendorffii HOM05D003867 ORTHO05D004593 5.4e-182 641.3 319 92.5
Pp3c4_17990 Physcomitrium patens HOM05D003867 ORTHO05D004593 2.1e-181 639.4 362 86.2
AagrBONN_evm.TU.Sc2ySwM_117.2067 Anthoceros agrestis HOM05D003867 ORTHO05D004593 1.9e-179 632.9 359 82.5
SEGI_02035 Sequoiadendron giganteum HOM05D003867 ORTHO05D004593 4.3e-179 631.7 342 91.2
HanXRQChr15g0475281 Helianthus annuus HOM05D003867 ORTHO05D004593 7.3e-179 630.9 366 82.2
Mapoly0052s0094 Marchantia polymorpha HOM05D003867 ORTHO05D004593 2.1e-178 629.4 319 90.6
CBR_g4558 Chara braunii HOM05D003867 ORTHO05D004593 5.8e-176 621.3 319 90.0
Lsat_1_v5_gn_0_47760 Lactuca sativa HOM05D003867 ORTHO05D004593 1.9e-174 616.3 318 89.3
MCO16G634 Micromonas commoda HOM05D003867 ORTHO05D004593 5.2e-169 598.2 318 85.8
AUR62024144 Chenopodium quinoa HOM05D003867 ORTHO05D004593 2.6e-168 595.9 291 94.8
CiPaw.06G100100 Carya illinoinensis HOM05D003867 ORTHO05D004593 7.6e-168 594.3 290 94.8
arahy.Tifrunner.gnm1.ann1.IM3BGM Arachis hypogaea HOM05D003867 ORTHO05D004593 9.9e-168 594.0 290 94.8
AUR62005586 Chenopodium quinoa HOM05D003867 ORTHO05D004593 9.9e-168 594.0 290 94.8
unitig_21.g20878 Utricularia gibba HOM05D003867 ORTHO05D004593 4.9e-167 591.7 290 95.2
unitig_744.g24299 Utricularia gibba HOM05D003867 ORTHO05D004593 5.4e-166 588.2 331 88.5
CBR_g30767 Chara braunii HOM05D003867 ORTHO05D004593 9.6e-163 577.4 314 83.4
Cre10.g422600 Chlamydomonas reinhardtii HOM05D003867 ORTHO05D004593 4.5e-160 568.5 318 82.1
PRCOL_00003927 Prasinoderma coloniale HOM05D003867 ORTHO05D004593 4.5e-160 568.5 317 82.0
CDE02G4050 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 2.4e-153 546.2 369 74.5
Dinv37748 Davidia involucrata HOM05D003867 ORTHO05D004593 4.0e-153 545.4 267 95.1
FAN22G0799 Fragaria x ananassa HOM05D003867 ORTHO05D004593 8.7e-148 527.7 298 89.6
FAN12G0392 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.9e-147 526.6 299 89.0
Sed0024813 Sechium edule HOM05D003867 ORTHO05D004593 2.5e-147 526.2 363 75.2
FAN17G1814 Fragaria x ananassa HOM05D003867 ORTHO05D004593 9.6e-147 524.2 298 88.9
FAN07G1251 Fragaria x ananassa HOM05D003867 ORTHO05D004593 4.0e-145 518.8 298 88.6
Nn7g37842 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.5e-144 516.9 267 90.3
Haze_26697 Corylus avellana HOM05D003867 ORTHO05D004593 3.8e-135 485.7 290 75.9
Nn3g20865 Nelumbo nucifera HOM05D003867 ORTHO05D004593 2.2e-127 459.9 245 86.9
Actinidia20690 Actinidia chinensis HOM05D003867 ORTHO05D004593 2.0e-115 420.2 309 68.6
TAR629G2520 Trochodendron aralioides HOM05D003867 ORTHO05D004593 1.2e-112 411.0 203 94.6
HPP92_000985 Vanilla planifolia HOM05D003867 ORTHO05D004593 5.2e-108 395.6 198 91.4
Aqoxy3G01811 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 1.1e-97 361.3 174 94.8
Actinidia09668 Actinidia chinensis HOM05D003867 ORTHO05D004593 1.9e-70 270.8 149 83.2
Haze_26928 Corylus avellana HOM05D003867 ORTHO05D004593 1.6e-69 267.7 170 72.4
Nitab4.5_0000581g0020 Nicotiana tabacum HOM05D003867 ORTHO05D004593 6.8e-68 262.3 166 80.1
Lj6P823T18 Lonicera japonica HOM05D003867 ORTHO05D004593 7.5e-67 258.8 146 84.2
HPP92_000984 Vanilla planifolia HOM05D003867 ORTHO05D004593 2.1e-64 250.8 162 81.5
MD16G1114900 Malus domestica HOM05D003867 ORTHO05D004593 7.8e-64 248.8 127 89.8
GSVIVG01020401001 Vitis vinifera HOM05D003867 ORTHO05D004593 2.1e-56 224.2 147 82.3
Aqoxy84s003 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 2.5e-54 217.2 259 44.8
MD16G1114800 Malus domestica HOM05D003867 ORTHO05D004593 1.3e-50 204.9 100 94.0
Nn8g40622 Nelumbo nucifera HOM05D003867 ORTHO05D004593 3.5e-48 196.8 102 90.2
Actinidia09669 Actinidia chinensis HOM05D003867 ORTHO05D004593 4.8e-45 186.4 127 76.4
Potri.008G177801 Populus trichocarpa HOM05D003867 ORTHO05D004593 7.9e-32 142.5 108 64.8
Duzib128G1406 Durio zibethinus HOM05D003867 ORTHO05D004593 1.8e-28 131.3 156 44.2
TAR629G2231 Trochodendron aralioides HOM05D003867 ORTHO05D004593 1.8e-23 114.8 55 90.9
Atru.chr11.2286 Acer truncatum HOM05D003867 ORTHO05D004593 2.3e-23 114.4 55 87.3
BcaC03g13233 Brassica carinata HOM05D003155 ORTHO05D012487 4.3e-22 110.2 293 32.4
CSS0023173 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 4.3e-22 110.2 53 86.8
Pp3c3_8640 Physcomitrium patens HOM05D003867 ORTHO05D004593 1.3e-21 108.6 65 80.0
GSVIVG01013345001 Vitis vinifera HOM05D003867 ORTHO05D004593 2.8e-21 107.5 67 70.1
Atru.chr11.2285 Acer truncatum HOM05D003867 ORTHO05D004593 9.0e-20 102.4 47 95.7
C02p03650 Brassica napus HOM05D003867 ORTHO05D004593 4.2e-17 93.6 127 47.2
Pp3c13_10840 Physcomitrium patens HOM05D003867 ORTHO05D004593 4.2e-17 93.6 48 89.6
BolC2t06324H Brassica oleracea HOM05D003867 ORTHO05D004593 2.1e-16 91.3 127 46.5
Hund25436 Selenicereus undatus HOM05D000424 ORTHO05D008586 1.5e-14 85.1 168 35.1
SGA_v2.0_scaffold63G21764 Striga asiatica HOM05D042453 ORTHO05D402154 4.8e-13 80.1 77 62.3
FvH4_1g23805 Fragaria vesca HOM05D000280 ORTHO05D000632 7.9e-08 62.8 53 56.6
FvH4_3g31747 Fragaria vesca HOM05D011771 ORTHO05D014214 1.0e-07 62.4 53 60.4
FvH4_3g23161 Fragaria vesca HOM05D011771 ORTHO05D014214 3.0e-07 60.8 53 58.5
Nitab4.5_0027010g0010 Nicotiana tabacum HOM05D003867 ORTHO05D004593 1.5e-06 58.5 61 65.6
Duzib052G0593 Durio zibethinus HOM05D000222 ORTHO05D001350 4.4e-06 57.0 40 65.0


User provided reference genes

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